More than 300 homologs were found in PanDaTox collection
for query gene Caul_4546 on replicon NC_010338
Organism: Caulobacter sp. K31



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_4546  two component transcriptional regulator  100 
 
 
230 aa  455  1e-127  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  81.22 
 
 
229 aa  379  1e-104  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_009719  Plav_0399  two component transcriptional regulator  76.55 
 
 
272 aa  355  3.9999999999999996e-97  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.802217  normal 
 
 
-
 
NC_007643  Rru_A0603  two component transcriptional regulator  66.67 
 
 
233 aa  311  5.999999999999999e-84  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.0519325  n/a   
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  66.67 
 
 
234 aa  310  1e-83  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  65.33 
 
 
239 aa  309  2e-83  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  65.33 
 
 
234 aa  308  2.9999999999999997e-83  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_010505  Mrad2831_2339  two component transcriptional regulator  65.77 
 
 
231 aa  307  6.999999999999999e-83  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009720  Xaut_0202  two component transcriptional regulator  65.93 
 
 
233 aa  301  7.000000000000001e-81  Xanthobacter autotrophicus Py2  Bacteria  normal  0.382528  normal 
 
 
-
 
NC_007964  Nham_0640  two component transcriptional regulator  65.04 
 
 
233 aa  298  4e-80  Nitrobacter hamburgensis X14  Bacteria  normal  0.772339  n/a   
 
 
-
 
NC_007406  Nwi_0511  phosphate regulon transcriptional regulatory protein phoB  65.93 
 
 
234 aa  298  5e-80  Nitrobacter winogradskyi Nb-255  Bacteria  normal  normal  0.473137 
 
 
-
 
NC_010511  M446_6685  two component transcriptional regulator  63.27 
 
 
234 aa  296  1e-79  Methylobacterium sp. 4-46  Bacteria  normal  0.599421  normal 
 
 
-
 
NC_009485  BBta_1991  two component transcriptional regulator  64.6 
 
 
235 aa  296  1e-79  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_7423  two component transcriptional regulator PhoB, winged helix family  63.72 
 
 
234 aa  296  2e-79  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0173  two component transcriptional regulator PhoB, winged helix family  65.49 
 
 
227 aa  293  2e-78  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.505642  normal  0.985195 
 
 
-
 
NC_012850  Rleg_0183  two component transcriptional regulator PhoB, winged helix family  65.49 
 
 
227 aa  292  3e-78  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.635675 
 
 
-
 
NC_007925  RPC_4918  two component transcriptional regulator  63.72 
 
 
234 aa  291  6e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.134814 
 
 
-
 
NC_008254  Meso_3116  two component transcriptional regulator  61.78 
 
 
229 aa  290  9e-78  Chelativorans sp. BNC1  Bacteria  normal  0.202822  n/a   
 
 
-
 
NC_009636  Smed_0124  two component transcriptional regulator  65.04 
 
 
227 aa  290  1e-77  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.352403 
 
 
-
 
NC_011989  Avi_0485  phosphate regulon transcriptional regulatory protein PhoB  64.6 
 
 
227 aa  290  1e-77  Agrobacterium vitis S4  Bacteria  normal  0.537934  n/a   
 
 
-
 
NC_004310  BR2143  phosphate regulon transcriptional regulatory protein Phob  65.02 
 
 
228 aa  289  3e-77  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0893  winged helix family two component transcriptional regulator  62.83 
 
 
233 aa  287  9e-77  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5261  two component transcriptional regulator, winged helix family  62.83 
 
 
237 aa  287  9e-77  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.909356  n/a   
 
 
-
 
NC_009505  BOV_2058  phosphate regulon transcriptional regulatory protein PhoB  64.73 
 
 
228 aa  287  1e-76  Brucella ovis ATCC 25840  Bacteria  normal  0.275433  n/a   
 
 
-
 
NC_007778  RPB_0781  two component transcriptional regulator  62.39 
 
 
233 aa  286  2e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.174075 
 
 
-
 
NC_009667  Oant_0766  two component transcriptional regulator  64.73 
 
 
228 aa  285  2.9999999999999996e-76  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.0291358  n/a   
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  62.67 
 
 
265 aa  283  1.0000000000000001e-75  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_009484  Acry_2951  two component transcriptional regulator  60.79 
 
 
236 aa  279  3e-74  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3413  two component transcriptional regulator  63.11 
 
 
252 aa  278  4e-74  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.427436 
 
 
-
 
NC_009952  Dshi_1538  phosphate regulon transcriptional regulatory protein  61.88 
 
 
228 aa  278  4e-74  Dinoroseobacter shibae DFL 12  Bacteria  normal  normal  0.280381 
 
 
-
 
NC_009511  Swit_3577  two component transcriptional regulator  63.96 
 
 
232 aa  278  6e-74  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.70324 
 
 
-
 
NC_007794  Saro_2281  two component transcriptional regulator  63.39 
 
 
229 aa  275  3e-73  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.331932  n/a   
 
 
-
 
NC_008048  Sala_0821  two component transcriptional regulator  61.61 
 
 
232 aa  275  4e-73  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.60557  hitchhiker  0.00503775 
 
 
-
 
NC_008044  TM1040_1257  two component transcriptional regulator  59.64 
 
 
229 aa  274  1.0000000000000001e-72  Ruegeria sp. TM1040  Bacteria  normal  0.536699  normal 
 
 
-
 
NC_009428  Rsph17025_1924  two component transcriptional regulator  60.99 
 
 
230 aa  273  2.0000000000000002e-72  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.781724  normal  0.399122 
 
 
-
 
NC_009049  Rsph17029_1257  two component transcriptional regulator  60.54 
 
 
230 aa  271  6e-72  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.621627  normal 
 
 
-
 
NC_007493  RSP_2599  phosphate regulon transcriptional regulator, PhoR  60.54 
 
 
230 aa  271  6e-72  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  n/a   
 
 
-
 
NC_007802  Jann_2294  two component transcriptional regulator  59.64 
 
 
228 aa  270  1e-71  Jannaschia sp. CCS1  Bacteria  normal  0.305192  normal 
 
 
-
 
NC_008687  Pden_4325  two component transcriptional regulator  60.09 
 
 
229 aa  268  4e-71  Paracoccus denitrificans PD1222  Bacteria  normal  0.974523  normal 
 
 
-
 
NC_011365  Gdia_2688  two component transcriptional regulator PhoB, winged helix family  57.85 
 
 
243 aa  260  1e-68  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  0.0901925  normal  0.494683 
 
 
-
 
NC_007404  Tbd_0216  two component transcriptional regulator  52.63 
 
 
230 aa  244  6.999999999999999e-64  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.305183 
 
 
-
 
NC_009092  Shew_2749  two component transcriptional regulator  52.89 
 
 
241 aa  238  5e-62  Shewanella loihica PV-4  Bacteria  decreased coverage  0.00000593879  unclonable  0.00000330773 
 
 
-
 
NC_009831  Ssed_3303  two component transcriptional regulator  53.36 
 
 
229 aa  238  8e-62  Shewanella sediminis HAW-EB3  Bacteria  unclonable  0.0000000702519  hitchhiker  0.00000106408 
 
 
-
 
NC_010506  Swoo_3452  two component transcriptional regulator  52.91 
 
 
229 aa  237  1e-61  Shewanella woodyi ATCC 51908  Bacteria  hitchhiker  0.00686704  hitchhiker  0.000158375 
 
 
-
 
NC_008782  Ajs_2367  two component transcriptional regulator  52.47 
 
 
235 aa  236  2e-61  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4913  two component transcriptional regulator  53.3 
 
 
231 aa  236  3e-61  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.121364 
 
 
-
 
NC_011992  Dtpsy_1491  two component transcriptional regulator PhoB, winged helix family  52.02 
 
 
235 aa  234  9e-61  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2768  two component transcriptional regulator, winged helix family protein  51.56 
 
 
229 aa  233  1.0000000000000001e-60  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.0176064  n/a   
 
 
-
 
NC_007614  Nmul_A2231  two component transcriptional regulator  54.42 
 
 
234 aa  233  2.0000000000000002e-60  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1074  response regulator receiver protein  51.56 
 
 
229 aa  233  2.0000000000000002e-60  Shewanella amazonensis SB2B  Bacteria  hitchhiker  0.0000246777  normal  0.491091 
 
 
-
 
NC_008752  Aave_2631  two component transcriptional regulator  51.32 
 
 
235 aa  233  2.0000000000000002e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  0.552533  normal  0.0653315 
 
 
-
 
NC_009438  Sputcn32_1296  two component transcriptional regulator  51.57 
 
 
229 aa  232  3e-60  Shewanella putrefaciens CN-32  Bacteria  unclonable  0.000000000460678  n/a   
 
 
-
 
NC_011663  Sbal223_2981  two component transcriptional regulator PhoB, winged helix family  51.11 
 
 
229 aa  232  3e-60  Shewanella baltica OS223  Bacteria  hitchhiker  0.000000220801  hitchhiker  0.00121997 
 
 
-
 
NC_004347  SO_1558  phosphate regulon response regulator PhoB  51.57 
 
 
239 aa  232  3e-60  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007947  Mfla_0489  two component transcriptional regulator  54.26 
 
 
228 aa  232  3e-60  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1364  two component transcriptional regulator  51.11 
 
 
229 aa  232  3e-60  Shewanella baltica OS185  Bacteria  hitchhiker  0.0000657343  n/a   
 
 
-
 
NC_009997  Sbal195_1403  two component transcriptional regulator  51.11 
 
 
229 aa  232  3e-60  Shewanella baltica OS195  Bacteria  hitchhiker  0.00109837  normal  0.0219543 
 
 
-
 
NC_009901  Spea_2969  two component transcriptional regulator  53.33 
 
 
229 aa  232  3e-60  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.000000855765  n/a   
 
 
-
 
NC_009052  Sbal_1378  two component transcriptional regulator  51.11 
 
 
229 aa  232  3e-60  Shewanella baltica OS155  Bacteria  hitchhiker  0.00000291119  n/a   
 
 
-
 
NC_003910  CPS_1208  phosphate regulon response regulator PhoB  49.78 
 
 
233 aa  232  4.0000000000000004e-60  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_0098  two component transcriptional regulator  52 
 
 
229 aa  232  4.0000000000000004e-60  Halorhodospira halophila SL1  Bacteria  normal  0.761303  n/a   
 
 
-
 
NC_008321  Shewmr4_2709  two component transcriptional regulator  51.57 
 
 
229 aa  232  4.0000000000000004e-60  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00000407229  decreased coverage  0.000000263688 
 
 
-
 
NC_008322  Shewmr7_2777  two component transcriptional regulator  51.57 
 
 
229 aa  232  4.0000000000000004e-60  Shewanella sp. MR-7  Bacteria  unclonable  0.000000628627  decreased coverage  0.000208697 
 
 
-
 
NC_008577  Shewana3_2879  two component transcriptional regulator  51.57 
 
 
229 aa  232  4.0000000000000004e-60  Shewanella sp. ANA-3  Bacteria  hitchhiker  0.000000143261  hitchhiker  0.00000615281 
 
 
-
 
NC_008781  Pnap_2201  two component transcriptional regulator  52.47 
 
 
242 aa  231  7.000000000000001e-60  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.153982  normal 
 
 
-
 
NC_011662  Tmz1t_0227  two component transcriptional regulator PhoB, winged helix family  52.61 
 
 
236 aa  230  1e-59  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1713  two component transcriptional regulator PhoB, winged helix family  53.25 
 
 
237 aa  229  2e-59  Ralstonia pickettii 12D  Bacteria  normal  0.0484795  normal  0.810471 
 
 
-
 
NC_007954  Sden_2689  phosphate regulon transcriptional regulatory protein phoB  51.11 
 
 
229 aa  229  2e-59  Shewanella denitrificans OS217  Bacteria  hitchhiker  0.00000627834  n/a   
 
 
-
 
NC_008825  Mpe_A1277  two component transcriptional regulator  54.3 
 
 
233 aa  229  2e-59  Methylibium petroleiphilum PM1  Bacteria  normal  0.0649233  normal  0.253886 
 
 
-
 
NC_010682  Rpic_2021  two component transcriptional regulator, winged helix family  53.25 
 
 
237 aa  229  2e-59  Ralstonia pickettii 12J  Bacteria  normal  0.198844  normal 
 
 
-
 
NC_009783  VIBHAR_01026  response regulator  50.66 
 
 
229 aa  229  2e-59  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_011071  Smal_0824  two component transcriptional regulator, winged helix family  53.33 
 
 
229 aa  229  4e-59  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_008228  Patl_1053  two component transcriptional regulator  50.22 
 
 
229 aa  228  6e-59  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A0253  DNA-binding response regulator PhoB  49.78 
 
 
229 aa  228  7e-59  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1534  phosphate regulon two-component response regulator transcription regulator protein  53.25 
 
 
237 aa  228  8e-59  Ralstonia solanacearum GMI1000  Bacteria  normal  0.286797  normal 
 
 
-
 
NC_013456  VEA_004385  phosphate regulon transcriptional regulatory protein PhoB  50.22 
 
 
229 aa  227  9e-59  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA3105  DNA-binding response regulator PhoB  52.25 
 
 
232 aa  225  4e-58  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_011312  VSAL_I2457  response regulator homolog PhoB (phosphate regulon transcriptional regulatory protein)  48.7 
 
 
230 aa  225  4e-58  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2232  two component transcriptional regulator, winged helix family protein  51.34 
 
 
227 aa  225  4e-58  Psychromonas ingrahamii 37  Bacteria  normal  0.326614  normal  0.43086 
 
 
-
 
NC_009832  Spro_1041  two component transcriptional regulator  50.23 
 
 
229 aa  225  5.0000000000000005e-58  Serratia proteamaculans 568  Bacteria  normal  normal  0.194422 
 
 
-
 
NC_007973  Rmet_2180  two component transcriptional regulator  52.4 
 
 
235 aa  224  7e-58  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0753297 
 
 
-
 
NC_009708  YpsIP31758_3136  phosphate regulon transcriptional regulatory protein PhoB  50.23 
 
 
229 aa  224  8e-58  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3286  phosphate regulon transcriptional regulatory protein  50.23 
 
 
230 aa  224  8e-58  Yersinia pestis Angola  Bacteria  normal  normal  0.0413143 
 
 
-
 
NC_010465  YPK_3276  two component transcriptional regulator  50.23 
 
 
229 aa  224  8e-58  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A2162  phosphate regulon transcriptional regulatory protein phoB  51.97 
 
 
235 aa  223  1e-57  Ralstonia eutropha JMP134  Bacteria  normal  0.308703  n/a   
 
 
-
 
NC_007484  Noc_2401  phosphate regulon transcriptional regulatory protein phoB  49.78 
 
 
229 aa  224  1e-57  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03440  putative DNA-binding response regulator PhoB  50.22 
 
 
229 aa  224  1e-57  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_2316  two component transcriptional regulator PhoB, winged helix family  50.45 
 
 
230 aa  223  1e-57  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_3210  two component transcriptional regulator PhoB, winged helix family  49.77 
 
 
229 aa  223  2e-57  Escherichia coli DH1  Bacteria  normal  0.146413  n/a   
 
 
-
 
NC_009801  EcE24377A_0427  transcriptional regulator PhoB  49.77 
 
 
229 aa  223  2e-57  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0785  DNA-binding response regulator PhoB  51.97 
 
 
233 aa  223  2e-57  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A0467  transcriptional regulator PhoB  49.77 
 
 
229 aa  223  2e-57  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_3234  transcriptional regulator PhoB  49.77 
 
 
229 aa  223  2e-57  Escherichia coli ATCC 8739  Bacteria  normal  0.456974  unclonable  0.00000000819474 
 
 
-
 
NC_009076  BURPS1106A_1520  phosphate regulon transcriptional regulatory protein PhoB  51.97 
 
 
233 aa  223  2e-57  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1490  phosphate regulon transcriptional regulatory protein PhoB  51.97 
 
 
233 aa  223  2e-57  Burkholderia pseudomallei 668  Bacteria  normal  0.72233  n/a   
 
 
-
 
NC_007434  BURPS1710b_1623  phosphate regulon transcriptional regulatory protein PhoB  51.97 
 
 
233 aa  223  2e-57  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2768  phosphate regulon transcriptional regulatory protein PhoB  51.97 
 
 
233 aa  223  2e-57  Burkholderia thailandensis E264  Bacteria  normal  0.368066  n/a   
 
 
-
 
NC_010498  EcSMS35_0429  transcriptional regulator PhoB  49.77 
 
 
229 aa  223  2e-57  Escherichia coli SMS-3-5  Bacteria  normal  0.283039  normal 
 
 
-
 
NC_008836  BMA10229_A0572  phosphate regulon transcriptional regulatory protein PhoB  51.97 
 
 
233 aa  223  2e-57  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E0318  transcriptional regulator PhoB  49.77 
 
 
229 aa  223  2e-57  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>