More than 300 homologs were found in PanDaTox collection
for query gene Clim_0772 on replicon NC_010803
Organism: Chlorobium limicola DSM 245



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010803  Clim_0772  two component transcriptional regulator, winged helix family  100 
 
 
233 aa  463  1e-129  Chlorobium limicola DSM 245  Bacteria  normal  n/a   
 
 
-
 
NC_008639  Cpha266_0880  two component transcriptional regulator  83.12 
 
 
236 aa  390  1e-108  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_007512  Plut_0632  two component transcriptional regulator  79.22 
 
 
236 aa  376  1e-103  Chlorobium luteolum DSM 273  Bacteria  normal  0.883969  normal 
 
 
-
 
NC_011060  Ppha_1701  two component transcriptional regulator, winged helix family  79.39 
 
 
236 aa  375  1e-103  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0769  two component transcriptional regulator, winged helix family  76.19 
 
 
236 aa  367  1e-101  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal 
 
 
-
 
NC_010831  Cphamn1_1694  two component transcriptional regulator, winged helix family  75.76 
 
 
236 aa  358  3e-98  Chlorobium phaeobacteroides BS1  Bacteria  normal  decreased coverage  0.0000906935 
 
 
-
 
NC_007514  Cag_0435  two component transcriptional regulator  71.86 
 
 
253 aa  341  5.999999999999999e-93  Chlorobium chlorochromatii CaD3  Bacteria  normal  0.583358  n/a   
 
 
-
 
NC_008576  Mmc1_1491  two component transcriptional regulator  51.33 
 
 
236 aa  236  2e-61  Magnetococcus sp. MC-1  Bacteria  normal  decreased coverage  0.00391258 
 
 
-
 
NC_011146  Gbem_1865  two component transcriptional regulator, winged helix family  50.45 
 
 
226 aa  234  1.0000000000000001e-60  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_2513  two component transcriptional regulator, winged helix family  51.35 
 
 
225 aa  232  5e-60  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_6002  two component transcriptional regulator, winged helix family  49.35 
 
 
243 aa  228  5e-59  Haliangium ochraceum DSM 14365  Bacteria  normal  0.472724  normal 
 
 
-
 
NC_009483  Gura_1572  two component transcriptional regulator  49.78 
 
 
225 aa  228  8e-59  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000784208  n/a   
 
 
-
 
NC_007760  Adeh_4009  two component transcriptional regulator  48.67 
 
 
230 aa  227  1e-58  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.00751412  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  50 
 
 
226 aa  227  1e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_4125  two component transcriptional regulator, winged helix family  48.67 
 
 
230 aa  226  2e-58  Anaeromyxobacter sp. K  Bacteria  normal  0.125271  n/a   
 
 
-
 
NC_011891  A2cp1_4151  two component transcriptional regulator, winged helix family  48.23 
 
 
230 aa  226  3e-58  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010814  Glov_0588  two component transcriptional regulator, winged helix family  49.33 
 
 
226 aa  225  5.0000000000000005e-58  Geobacter lovleyi SZ  Bacteria  normal  0.944339  n/a   
 
 
-
 
NC_012918  GM21_1271  two component transcriptional regulator, winged helix family  50.67 
 
 
225 aa  225  6e-58  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_011146  Gbem_2952  two component transcriptional regulator, winged helix family  50.67 
 
 
225 aa  224  8e-58  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2693  two component transcriptional regulator  49.11 
 
 
226 aa  223  2e-57  Geobacter metallireducens GS-15  Bacteria  normal  normal  0.575064 
 
 
-
 
NC_002939  GSU1102  DNA-binding response regulator  48.88 
 
 
225 aa  222  4.9999999999999996e-57  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_0415  two component transcriptional regulator  47.79 
 
 
231 aa  219  1.9999999999999999e-56  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.777838 
 
 
-
 
NC_010571  Oter_2550  two component transcriptional regulator  48.87 
 
 
228 aa  215  5e-55  Opitutus terrae PB90-1  Bacteria  normal  normal  0.0605198 
 
 
-
 
NC_011769  DvMF_0882  two component transcriptional regulator, winged helix family  45.06 
 
 
230 aa  212  3.9999999999999995e-54  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.148935 
 
 
-
 
NC_008751  Dvul_1911  two component transcriptional regulator  45.49 
 
 
229 aa  211  5.999999999999999e-54  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.258551 
 
 
-
 
NC_008554  Sfum_0707  two component transcriptional regulator  46.9 
 
 
227 aa  210  1e-53  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.598521  normal 
 
 
-
 
NC_008554  Sfum_2892  two component transcriptional regulator  46.46 
 
 
227 aa  209  3e-53  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.0239565 
 
 
-
 
NC_008609  Ppro_3155  two component transcriptional regulator  48.43 
 
 
228 aa  209  3e-53  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_2556  two component transcriptional regulator  49.33 
 
 
225 aa  207  1e-52  Geobacter uraniireducens Rf4  Bacteria  decreased coverage  0.000000044969  n/a   
 
 
-
 
NC_013223  Dret_0467  two component transcriptional regulator, winged helix family  45.58 
 
 
230 aa  206  3e-52  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_1893  two component transcriptional regulator  45.09 
 
 
235 aa  202  2e-51  Magnetococcus sp. MC-1  Bacteria  normal  normal  0.203788 
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  45.95 
 
 
226 aa  202  5e-51  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_013510  Tcur_0700  two component transcriptional regulator, winged helix family  46.67 
 
 
226 aa  201  6e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  0.768939  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  45.33 
 
 
226 aa  201  9e-51  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  43.86 
 
 
229 aa  201  9.999999999999999e-51  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  46.72 
 
 
238 aa  201  9.999999999999999e-51  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  46.15 
 
 
234 aa  200  1.9999999999999998e-50  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  47.16 
 
 
235 aa  199  1.9999999999999998e-50  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  47.58 
 
 
225 aa  199  3e-50  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  45.22 
 
 
230 aa  199  3.9999999999999996e-50  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_4322  two component transcriptional regulator, winged helix family  47.19 
 
 
231 aa  197  9e-50  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  46.72 
 
 
229 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  46.58 
 
 
233 aa  196  2.0000000000000003e-49  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  47.16 
 
 
230 aa  197  2.0000000000000003e-49  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  45.19 
 
 
239 aa  194  7e-49  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  45.19 
 
 
239 aa  194  7e-49  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  44.59 
 
 
223 aa  194  1e-48  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  47.16 
 
 
227 aa  194  1e-48  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  46.02 
 
 
229 aa  194  1e-48  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  44.59 
 
 
223 aa  194  1e-48  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_0834  two component transcriptional regulator PhoB, winged helix family  45.15 
 
 
265 aa  194  1e-48  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0108417 
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  44.05 
 
 
223 aa  193  2e-48  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  46.22 
 
 
226 aa  193  2e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4046  response regulator receiver  45.58 
 
 
225 aa  193  2e-48  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  45.96 
 
 
238 aa  193  2e-48  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1193  response regulator  44.59 
 
 
223 aa  192  3e-48  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_1073  putative response regulator  44.02 
 
 
234 aa  192  3e-48  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  45.78 
 
 
229 aa  192  3e-48  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  44.59 
 
 
223 aa  192  3e-48  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1191  response regulator  44.59 
 
 
223 aa  192  4e-48  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0483  two component transcriptional regulator  48 
 
 
229 aa  192  4e-48  Maricaulis maris MCS10  Bacteria  normal  0.342081  normal 
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  44.59 
 
 
223 aa  192  4e-48  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_011883  Ddes_0567  two component transcriptional regulator, winged helix family  45.29 
 
 
225 aa  192  5e-48  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.463355  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  46.75 
 
 
240 aa  192  5e-48  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0329  two component transcriptional regulator, winged helix family  41.85 
 
 
231 aa  191  7e-48  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  44.59 
 
 
223 aa  191  9e-48  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  44.59 
 
 
223 aa  191  9e-48  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  43.4 
 
 
239 aa  190  1e-47  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  43.69 
 
 
223 aa  190  2e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  47.53 
 
 
256 aa  189  2e-47  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  44.49 
 
 
223 aa  189  2e-47  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_6749  two component transcriptional regulator, winged helix family  43.56 
 
 
226 aa  189  2.9999999999999997e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.290774  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  45.89 
 
 
238 aa  189  4e-47  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_010001  Cphy_2855  two component transcriptional regulator  42.6 
 
 
224 aa  189  4e-47  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000952101  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  44.35 
 
 
232 aa  189  4e-47  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  43.97 
 
 
234 aa  188  5.999999999999999e-47  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  46.05 
 
 
236 aa  188  5.999999999999999e-47  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  45.02 
 
 
250 aa  188  8e-47  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  45.02 
 
 
250 aa  188  8e-47  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  45.02 
 
 
250 aa  188  8e-47  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  45.02 
 
 
238 aa  187  1e-46  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  45.02 
 
 
238 aa  187  1e-46  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  45.02 
 
 
238 aa  187  1e-46  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  45.02 
 
 
238 aa  187  1e-46  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  42.86 
 
 
230 aa  187  1e-46  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_010338  Caul_4546  two component transcriptional regulator  46.26 
 
 
230 aa  187  1e-46  Caulobacter sp. K31  Bacteria  normal  normal  0.281853 
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  43.59 
 
 
239 aa  187  1e-46  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_013173  Dbac_2662  two component transcriptional regulator, winged helix family  40.79 
 
 
231 aa  187  1e-46  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_3106  two component transcriptional regulator, winged helix family  46.98 
 
 
234 aa  186  2e-46  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_3000  two component transcriptional regulator, winged helix family  46.98 
 
 
234 aa  187  2e-46  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_5257  two component transcriptional regulator, winged helix family  45.22 
 
 
234 aa  186  2e-46  Methylobacterium populi BJ001  Bacteria  normal  0.025536  normal 
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  45.78 
 
 
228 aa  186  2e-46  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  45.02 
 
 
238 aa  187  2e-46  Bacillus cereus G9842  Bacteria  normal  hitchhiker  3.95849e-16 
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  43.97 
 
 
239 aa  186  2e-46  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  45.02 
 
 
238 aa  187  2e-46  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_0850  two component transcriptional regulator, winged helix family  43.11 
 
 
226 aa  186  3e-46  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013757  Gobs_4602  two component transcriptional regulator, winged helix family  44 
 
 
226 aa  186  3e-46  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_5185  two component transcriptional regulator PhoB, winged helix family  44.35 
 
 
234 aa  185  4e-46  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.809056 
 
 
-
 
NC_010172  Mext_4718  phosphate regulon transcriptional regulatory protein PhoB  44.35 
 
 
239 aa  186  4e-46  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.220817 
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  46.43 
 
 
225 aa  186  4e-46  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
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