Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_1701 |
Symbol | |
ID | 6463047 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 1816437 |
End bp | 1817147 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642727917 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002018554 |
Protein GI | 194336760 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGAAC CATTGATTCT TGTTGTTGAA GATGATCCAA ATCTTGCAAA ATTGCTGGAA TACAATCTCA ACAGGGCTGG CTATAAATCT CATCTTTCCG GCACAGCCGA AGATGCTCTT GAGCAACTGT CACGAAAAAG CTTTGACCTG GTGCTTCTTG ACGTCATGCT GCCGGGAATG GACGGTTTCG AGCTCTGCCG GATCATCCGA CAGCATCAAC TCTACAAGGA TCTTCCAATC ATCATGGTGA CGGCCAAAGG TGAAGAGATA GATCGAATCC TTGGCTTTGA GCTCGGCATT GACGACTATG TTGTAAAACC CTTCAGCCCC CGTGAACTGA ACCTTCGTAT ACGGGCAATC CTTAAGCGGG ATCGCCGTCA AGGAGGTAAA ATAGAAGAGC TGCTCAAAGC CGGAGATCTT GAAATCGATC TGGTACGGCA CATCGTGACG CTTGATGGCA AGGAGCTGGT GGTCACCCTT ATGGAGTTCA AACTTCTGGT TGCGCTCCTC AAAAGAAAGG GCGAAGCGCA ATCAAGGGAG AGGCTGCTCA GCGATGTCTG GGATGTCGAC AAAAGTATCA ACACCAGAAC CATCGACACA CACATTACGA GAATCCGCGA AAAGCTTGGC GAAACTGGCC GTATGATTAA AACGGTGCGG GGACTTGGTT ATAAATTTGA GGAAAAAGAG AGTGACGATC ATGCTGAATA A
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Protein sequence | MQEPLILVVE DDPNLAKLLE YNLNRAGYKS HLSGTAEDAL EQLSRKSFDL VLLDVMLPGM DGFELCRIIR QHQLYKDLPI IMVTAKGEEI DRILGFELGI DDYVVKPFSP RELNLRIRAI LKRDRRQGGK IEELLKAGDL EIDLVRHIVT LDGKELVVTL MEFKLLVALL KRKGEAQSRE RLLSDVWDVD KSINTRTIDT HITRIREKLG ETGRMIKTVR GLGYKFEEKE SDDHAE
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