Gene Ppha_1701 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1701 
Symbol 
ID6463047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1816437 
End bp1817147 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content48% 
IMG OID642727917 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002018554 
Protein GI194336760 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGGAAC CATTGATTCT TGTTGTTGAA GATGATCCAA ATCTTGCAAA ATTGCTGGAA 
TACAATCTCA ACAGGGCTGG CTATAAATCT CATCTTTCCG GCACAGCCGA AGATGCTCTT
GAGCAACTGT CACGAAAAAG CTTTGACCTG GTGCTTCTTG ACGTCATGCT GCCGGGAATG
GACGGTTTCG AGCTCTGCCG GATCATCCGA CAGCATCAAC TCTACAAGGA TCTTCCAATC
ATCATGGTGA CGGCCAAAGG TGAAGAGATA GATCGAATCC TTGGCTTTGA GCTCGGCATT
GACGACTATG TTGTAAAACC CTTCAGCCCC CGTGAACTGA ACCTTCGTAT ACGGGCAATC
CTTAAGCGGG ATCGCCGTCA AGGAGGTAAA ATAGAAGAGC TGCTCAAAGC CGGAGATCTT
GAAATCGATC TGGTACGGCA CATCGTGACG CTTGATGGCA AGGAGCTGGT GGTCACCCTT
ATGGAGTTCA AACTTCTGGT TGCGCTCCTC AAAAGAAAGG GCGAAGCGCA ATCAAGGGAG
AGGCTGCTCA GCGATGTCTG GGATGTCGAC AAAAGTATCA ACACCAGAAC CATCGACACA
CACATTACGA GAATCCGCGA AAAGCTTGGC GAAACTGGCC GTATGATTAA AACGGTGCGG
GGACTTGGTT ATAAATTTGA GGAAAAAGAG AGTGACGATC ATGCTGAATA A
 
Protein sequence
MQEPLILVVE DDPNLAKLLE YNLNRAGYKS HLSGTAEDAL EQLSRKSFDL VLLDVMLPGM 
DGFELCRIIR QHQLYKDLPI IMVTAKGEEI DRILGFELGI DDYVVKPFSP RELNLRIRAI
LKRDRRQGGK IEELLKAGDL EIDLVRHIVT LDGKELVVTL MEFKLLVALL KRKGEAQSRE
RLLSDVWDVD KSINTRTIDT HITRIREKLG ETGRMIKTVR GLGYKFEEKE SDDHAE