Gene Dhaf_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1237 
Symbol 
ID7258207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1331631 
End bp1332335 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content51% 
IMG OID643561150 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002457730 
Protein GI219667295 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.178035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTAAAA TTTTGCTCGT GGAAGATGAT GCGGTCATTC AAGAGCTTGT CACCTACAAT 
CTGGAACGTG AGGGTTATAC GGTCATGATC GCTGAAGAAG GGAATAAGGC CTTAGAGTTA
TTAAATAAGG AGAAGCCGGA TCTGGTGCTT TTGGATGTGA TGCTTCCGGA ATTGGATGGG
CTGGACGTGT GTAAAAAAAT CCGGGGGAAC CAGGAGACGG CGAACATCCC CCTCATTATG
CTCAGTGCCC GGGATGAGGT GGCTGATCGG GTTATCGGCC TGGAGCTGGG TGCTGATGAT
TATATCACCA AACCGTTCAG CCCCCGGGAG TTGCTGGCCC GGATTAAGGC CCGGCTGAGA
GAAGAAAGGC GCAATTCAAC GCCGCCGCCC CTTTCTCTTA CCTGGGGTGA TTTGGAGATC
TGGCCGGAGA GCTATATGGT TACGATAAAA GGAGAACAGG TCACCCTGAC AGGAAAGGAA
TTTGAGCTCC TGCATATCTT TATGAAACGC CCCAACCAGG TCTTCAGCAG AGAGTACCTC
CTGCAGAAAG TGTGGGGGTA TACCGTCAGC GGGGATACCA GAACGGTGGA TGTTCACATA
AGCAACCTGA GGAGTAAACT TAAATCGGTT TCACCAATTA TTGAATCGGT ACGGGGGGTT
GGCTACCGGT TGGCTGTAAA CTACTCCAGG CCCAAGGATG TTTAA
 
Protein sequence
MVKILLVEDD AVIQELVTYN LEREGYTVMI AEEGNKALEL LNKEKPDLVL LDVMLPELDG 
LDVCKKIRGN QETANIPLIM LSARDEVADR VIGLELGADD YITKPFSPRE LLARIKARLR
EERRNSTPPP LSLTWGDLEI WPESYMVTIK GEQVTLTGKE FELLHIFMKR PNQVFSREYL
LQKVWGYTVS GDTRTVDVHI SNLRSKLKSV SPIIESVRGV GYRLAVNYSR PKDV