Gene Mmc1_1491 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1491 
Symbol 
ID4483605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1823262 
End bp1823972 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content55% 
IMG OID639722233 
Producttwo component transcriptional regulator 
Protein accessionYP_865406 
Protein GI117924789 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00391258 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGTCTGTCA ACATCCTCAT TGTCGAAGAC GAACGGGATC TGGCTAATAC CCTGGAGTAT 
AGCTTGAAAC AAGAGGGCTT TAATGCTCGT GTCGCCCTAA CCGGTGAAGA GGGGATGCGA
ATTGCAACGG TGGAACGCTG GCCCGATCTG GTGCTGCTGG ATCTTATGTT GCCCGGTGTG
TCGGGCATTG AGGTGTGTCG ACGTATGCGT GAGGAGGATG GTACCCGTAC CATGCCGGTG
ATCATGCTCA CGGCGCGGGG GGAGGAGATT GACAAAGTGA TGGGCTTTGA GGCCGGAGCC
GATGACTATG TGGTTAAACC GTTTAAGGTT AGGGAGTTGG TCTTGCGTAT ACGCGCCATT
TTACGGCGGG TACAACCAGA GCAGGCCGAG AGTGCCGCCC TGGTCACCTT TGGTCGTTTA
AAGGTGGATC TAGAGGGGCA CCGGGTGTGG GTTGACGGTG AAGAGAGCAG CTTGACCGCG
ATGGAGTTTA AGTTACTGAC CACCTTTTTA TCGCGCAAGG GGCGGGTGCA AAACCGGGAT
ACCCTGCTCA ACGATGTATG GGGGGTAAAT GCCTTTGTGC AGACCCGCAC GGTGGATGCC
CACGTTAAAC GATTGCGGGA AAAACTTGGC CCAGCGGGTA AATATATGGA GACCATCCGC
GGGGTAGGTT ACCGTTTTCG TGATCGCCCG GATGGGGAAG ATATGTCGTG A
 
Protein sequence
MSVNILIVED ERDLANTLEY SLKQEGFNAR VALTGEEGMR IATVERWPDL VLLDLMLPGV 
SGIEVCRRMR EEDGTRTMPV IMLTARGEEI DKVMGFEAGA DDYVVKPFKV RELVLRIRAI
LRRVQPEQAE SAALVTFGRL KVDLEGHRVW VDGEESSLTA MEFKLLTTFL SRKGRVQNRD
TLLNDVWGVN AFVQTRTVDA HVKRLREKLG PAGKYMETIR GVGYRFRDRP DGEDMS