More than 300 homologs were found in PanDaTox collection
for query gene GWCH70_2675 on replicon NC_012793
Organism: Geobacillus sp. WCH70



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012793  GWCH70_2675  two component transcriptional regulator, winged helix family  100 
 
 
234 aa  476  1e-133  Geobacillus sp. WCH70  Bacteria  normal  0.661044  n/a   
 
 
-
 
NC_013411  GYMC61_0785  two component transcriptional regulator, winged helix family  78.3 
 
 
235 aa  380  1e-104  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_4720  DNA-binding response regulator PhoP  76.27 
 
 
239 aa  365  1e-100  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS4484  DNA-binding response regulator PhoP  76.27 
 
 
239 aa  365  1e-100  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4319  alkaline phosphatase synthesis response regulator  76.27 
 
 
239 aa  365  1e-100  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK4330  alkaline phosphatase synthesis response regulator  76.27 
 
 
239 aa  365  1e-100  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0539  DNA-binding response regulator PhoP  75.31 
 
 
239 aa  365  1e-100  Bacillus cereus G9842  Bacteria  normal  hitchhiker  0.000130788 
 
 
-
 
NC_011725  BCB4264_A4699  DNA-binding response regulator PhoP  75.31 
 
 
239 aa  365  1e-100  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_4833  DNA-binding response regulator PhoP  76.27 
 
 
239 aa  365  1e-100  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0982965  n/a   
 
 
-
 
NC_009674  Bcer98_3274  two component transcriptional regulator  76.17 
 
 
238 aa  365  1e-100  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_4704  DNA-binding response regulator PhoP  76.27 
 
 
239 aa  365  1e-100  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.00000000000000673192 
 
 
-
 
NC_011658  BCAH187_A4714  DNA-binding response regulator PhoP  76.27 
 
 
239 aa  365  1e-100  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4419  two component transcriptional regulator  75.42 
 
 
239 aa  362  2e-99  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1256  alkaline phosphatase synthesis transcriptional regulatory protein PhoP  67.23 
 
 
236 aa  325  4.0000000000000003e-88  Staphylococcus epidermidis RP62A  Bacteria  normal  0.577358  n/a   
 
 
-
 
NC_009632  SaurJH1_1784  alkaline phosphatase synthesis transcriptional regulatory protein  68.1 
 
 
234 aa  320  1.9999999999999998e-86  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.561076  n/a   
 
 
-
 
NC_009487  SaurJH9_1750  two component transcriptional regulator  68.1 
 
 
234 aa  320  1.9999999999999998e-86  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  57.63 
 
 
237 aa  258  4e-68  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  55.98 
 
 
235 aa  256  2e-67  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  55.98 
 
 
235 aa  256  2e-67  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  55.98 
 
 
235 aa  256  2e-67  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  55.98 
 
 
235 aa  256  2e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  55.98 
 
 
235 aa  256  2e-67  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  55.98 
 
 
235 aa  256  2e-67  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  56.41 
 
 
235 aa  256  2e-67  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  55.98 
 
 
235 aa  256  2e-67  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  55.98 
 
 
235 aa  256  2e-67  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  55.98 
 
 
235 aa  256  3e-67  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_007644  Moth_0070  two component transcriptional regulator  57.14 
 
 
229 aa  255  5e-67  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.834843 
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  56.17 
 
 
236 aa  254  9e-67  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009513  Lreu_0019  two component transcriptional regulator  55.08 
 
 
235 aa  254  1.0000000000000001e-66  Lactobacillus reuteri DSM 20016  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  55.56 
 
 
235 aa  253  2.0000000000000002e-66  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_008531  LEUM_0585  DNA-binding response regulator  54.42 
 
 
230 aa  251  5.000000000000001e-66  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00125793  n/a   
 
 
-
 
NC_008527  LACR_0444  DNA-binding response regulator  53.45 
 
 
233 aa  248  6e-65  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0064  DNA-binding response regulator  55.36 
 
 
235 aa  247  1e-64  Lactobacillus gasseri ATCC 33323  Bacteria  normal  0.611294  normal 
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  54.59 
 
 
239 aa  246  3e-64  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_008346  Swol_0951  response regulator receiver protein  52.77 
 
 
239 aa  245  4.9999999999999997e-64  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  unclonable  0.0000000111905  n/a   
 
 
-
 
NC_008532  STER_1116  DNA-binding response regulator  53.42 
 
 
235 aa  245  4.9999999999999997e-64  Streptococcus thermophilus LMD-9  Bacteria  normal  0.310768  n/a   
 
 
-
 
NC_002976  SERP2534  DNA-binding response regulator YycF  54.74 
 
 
233 aa  243  9.999999999999999e-64  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_0018  response regulator receiver  54.11 
 
 
233 aa  243  1.9999999999999999e-63  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_0018  two component transcriptional regulator  54.11 
 
 
233 aa  243  1.9999999999999999e-63  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.70243  n/a   
 
 
-
 
NC_004116  SAG0719  DNA-binding response regulator  52.77 
 
 
236 aa  240  1e-62  Streptococcus agalactiae 2603V/R  Bacteria  normal  0.0951718  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  53.51 
 
 
232 aa  238  9e-62  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1997  two component transcriptional regulator  56.33 
 
 
234 aa  237  1e-61  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.000000742772  n/a   
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  51.32 
 
 
232 aa  236  2e-61  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  51.69 
 
 
239 aa  235  4e-61  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  51.69 
 
 
239 aa  235  4e-61  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_013216  Dtox_1077  two component transcriptional regulator, winged helix family  50.21 
 
 
235 aa  229  2e-59  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  52.19 
 
 
230 aa  230  2e-59  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_011830  Dhaf_4050  two component transcriptional regulator, winged helix family  54.19 
 
 
227 aa  229  3e-59  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.00552008  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  51.95 
 
 
235 aa  228  5e-59  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  47.46 
 
 
239 aa  228  6e-59  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  51.54 
 
 
237 aa  226  2e-58  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_1100  two component transcriptional regulator, winged helix family  48.67 
 
 
236 aa  226  2e-58  Chloroflexus aggregans DSM 9485  Bacteria  normal  unclonable  0.0000000182155 
 
 
-
 
NC_013526  Tter_2867  two component transcriptional regulator, winged helix family  48.71 
 
 
233 aa  226  2e-58  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  51.54 
 
 
226 aa  224  1e-57  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_008528  OEOE_0105  DNA-binding response regulator  49.57 
 
 
237 aa  223  1e-57  Oenococcus oeni PSU-1  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2983  two component transcriptional regulator  53.12 
 
 
228 aa  223  2e-57  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0499  winged helix family two component transcriptional regulator  51.56 
 
 
229 aa  222  3e-57  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0997  two component transcriptional regulator  48.25 
 
 
230 aa  222  4e-57  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.679101  normal 
 
 
-
 
NC_009972  Haur_0804  two component transcriptional regulator  49.11 
 
 
236 aa  222  4e-57  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.324741  n/a   
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  51.56 
 
 
237 aa  221  4.9999999999999996e-57  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  50 
 
 
223 aa  222  4.9999999999999996e-57  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  48.44 
 
 
228 aa  220  9.999999999999999e-57  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  45.61 
 
 
239 aa  220  9.999999999999999e-57  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  49.11 
 
 
227 aa  220  1.9999999999999999e-56  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_011898  Ccel_2106  two component transcriptional regulator, winged helix family  49.78 
 
 
238 aa  218  5e-56  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_013552  DhcVS_143  DNA-binding response regulator, two-component system, OmpR family  47.79 
 
 
256 aa  218  5e-56  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2903  two component transcriptional regulator, winged helix family  48.28 
 
 
234 aa  218  6e-56  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010424  Daud_1419  two component transcriptional regulator  49.56 
 
 
231 aa  218  6e-56  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.0720218  n/a   
 
 
-
 
NC_010718  Nther_0984  two component transcriptional regulator, winged helix family  47.5 
 
 
246 aa  217  1e-55  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.0723779 
 
 
-
 
NC_013131  Caci_8215  two component transcriptional regulator, winged helix family  50 
 
 
226 aa  216  2e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  46.93 
 
 
228 aa  216  2e-55  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  49.13 
 
 
226 aa  216  2e-55  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  48.87 
 
 
230 aa  216  2.9999999999999998e-55  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1394  two component transcriptional regulator  48.26 
 
 
236 aa  216  2.9999999999999998e-55  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000024965  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  49.12 
 
 
231 aa  215  4e-55  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_4663  two component transcriptional regulator  47.81 
 
 
232 aa  215  4e-55  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1237  two component transcriptional regulator, winged helix family  48.67 
 
 
234 aa  216  4e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.178035  n/a   
 
 
-
 
NC_013205  Aaci_2922  two component transcriptional regulator, winged helix family  50.88 
 
 
230 aa  215  4e-55  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.221617  n/a   
 
 
-
 
NC_011830  Dhaf_1673  two component transcriptional regulator, winged helix family  49.56 
 
 
233 aa  215  5e-55  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  49.33 
 
 
229 aa  214  7e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0353  two component transcriptional regulator  49.78 
 
 
230 aa  214  9e-55  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.683455 
 
 
-
 
NC_009523  RoseRS_3818  two component transcriptional regulator  47.58 
 
 
230 aa  213  1.9999999999999998e-54  Roseiflexus sp. RS-1  Bacteria  normal  0.386967  normal  0.165932 
 
 
-
 
NC_011830  Dhaf_4687  two component transcriptional regulator, winged helix family  46.22 
 
 
230 aa  213  1.9999999999999998e-54  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000000280381  n/a   
 
 
-
 
NC_011831  Cagg_0243  two component transcriptional regulator, winged helix family  48.29 
 
 
235 aa  212  2.9999999999999995e-54  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.0646165  normal 
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  50 
 
 
229 aa  212  2.9999999999999995e-54  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_009455  DehaBAV1_0235  two component transcriptional regulator  46.46 
 
 
230 aa  213  2.9999999999999995e-54  Dehalococcoides sp. BAV1  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0135  DNA-binding response regulator  46.02 
 
 
230 aa  212  3.9999999999999995e-54  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_0623  DNA-binding response regulator  52.42 
 
 
231 aa  212  3.9999999999999995e-54  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.000212568  n/a   
 
 
-
 
NC_013946  Mrub_0302  two component transcriptional regulator, winged helix family  48.23 
 
 
221 aa  212  3.9999999999999995e-54  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_02690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  45.81 
 
 
229 aa  212  3.9999999999999995e-54  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_03700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  46.46 
 
 
226 aa  211  4.9999999999999996e-54  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.132847 
 
 
-
 
NC_014212  Mesil_0142  two component transcriptional regulator, winged helix family  48.89 
 
 
221 aa  211  4.9999999999999996e-54  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.709604 
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  50.22 
 
 
230 aa  211  1e-53  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  47.56 
 
 
228 aa  211  1e-53  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009565  TBFG_10499  two component system sensor transduction protein regX3  45.13 
 
 
227 aa  210  2e-53  Mycobacterium tuberculosis F11  Bacteria  decreased coverage  2.46064e-66  normal 
 
 
-
 
NC_007604  Synpcc7942_1012  two component transcriptional regulator  45.76 
 
 
257 aa  209  2e-53  Synechococcus elongatus PCC 7942  Bacteria  normal  0.658807  normal 
 
 
-
 
NC_010816  BLD_1073  putative response regulator  44.59 
 
 
234 aa  209  2e-53  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_013124  Afer_0200  two component transcriptional regulator, winged helix family  46.67 
 
 
242 aa  209  2e-53  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0955644  n/a   
 
 
-
 
NC_008262  CPR_0609  DNA-binding response regulator  51.98 
 
 
231 aa  210  2e-53  Clostridium perfringens SM101  Bacteria  hitchhiker  0.0000282114  n/a   
 
 
-
 
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