More than 300 homologs were found in PanDaTox collection
for query gene Dhaf_3739 on replicon NC_011830
Organism: Desulfitobacterium hafniense DCB-2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  100 
 
 
230 aa  468  1.0000000000000001e-131  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_012793  GWCH70_2219  two component transcriptional regulator, winged helix family  56.6 
 
 
240 aa  267  8e-71  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009487  SaurJH9_1549  two component transcriptional regulator  54.24 
 
 
241 aa  263  1e-69  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  n/a   
 
 
-
 
NC_009632  SaurJH1_1580  response regulator receiver  54.24 
 
 
241 aa  263  1e-69  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_1728  two component transcriptional regulator, winged helix family  56.83 
 
 
233 aa  264  1e-69  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1200  two component transcriptional regulator  55.13 
 
 
238 aa  261  4.999999999999999e-69  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1055  DNA-binding response regulator SrrA  55.08 
 
 
241 aa  259  2e-68  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_007644  Moth_0827  two component transcriptional regulator  59.46 
 
 
256 aa  258  5.0000000000000005e-68  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.00211389  normal  0.244563 
 
 
-
 
NC_013385  Adeg_1028  two component transcriptional regulator, winged helix family  53.39 
 
 
237 aa  257  1e-67  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  54.3 
 
 
228 aa  257  1e-67  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_013411  GYMC61_0402  two component transcriptional regulator, winged helix family  55.98 
 
 
241 aa  256  2e-67  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_1601  DNA-binding response regulator ResD  55.13 
 
 
250 aa  255  3e-67  Bacillus cereus ATCC 10987  Bacteria  normal  0.953648  n/a   
 
 
-
 
NC_011773  BCAH820_1569  DNA-binding response regulator ResD  55.13 
 
 
250 aa  255  3e-67  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.45334e-32 
 
 
-
 
NC_011658  BCAH187_A1637  DNA-binding response regulator ResD  55.13 
 
 
250 aa  255  3e-67  Bacillus cereus AH187  Bacteria  normal  0.0246031  n/a   
 
 
-
 
NC_005945  BAS1386  DNA-binding response regulator ResD  55.13 
 
 
238 aa  255  4e-67  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_1359  response regulator  55.13 
 
 
238 aa  255  4e-67  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0319788  n/a   
 
 
-
 
NC_006274  BCZK1358  response regulator  55.13 
 
 
238 aa  255  4e-67  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_1497  DNA-binding response regulator ResD  55.13 
 
 
238 aa  255  4e-67  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.862661  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1399  two component transcriptional regulator  53.85 
 
 
238 aa  253  1.0000000000000001e-66  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.129694  n/a   
 
 
-
 
NC_011772  BCG9842_B3814  DNA-binding response regulator ResD  54.7 
 
 
238 aa  254  1.0000000000000001e-66  Bacillus cereus G9842  Bacteria  normal  hitchhiker  3.95849e-16 
 
 
-
 
NC_011725  BCB4264_A1531  DNA-binding response regulator ResD  54.7 
 
 
238 aa  254  1.0000000000000001e-66  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  49.78 
 
 
230 aa  252  3e-66  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  53.81 
 
 
228 aa  251  5.000000000000001e-66  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_010424  Daud_1897  two component transcriptional regulator  52.68 
 
 
227 aa  244  9.999999999999999e-64  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  0.151466  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  52.49 
 
 
223 aa  241  5e-63  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  50.68 
 
 
223 aa  241  6e-63  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_013216  Dtox_4198  two component transcriptional regulator, winged helix family  50.45 
 
 
226 aa  240  1e-62  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  52.49 
 
 
223 aa  240  1e-62  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  51.58 
 
 
223 aa  239  2e-62  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  51.58 
 
 
223 aa  239  2e-62  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  52.49 
 
 
223 aa  239  2.9999999999999997e-62  Bacillus cereus G9842  Bacteria  normal  normal  0.910988 
 
 
-
 
NC_009253  Dred_2981  two component transcriptional regulator  50.89 
 
 
229 aa  239  2.9999999999999997e-62  Desulfotomaculum reducens MI-1  Bacteria  unclonable  0.0000000201285  n/a   
 
 
-
 
NC_010320  Teth514_2216  two component transcriptional regulator  49.34 
 
 
224 aa  238  4e-62  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3085  two component transcriptional regulator, winged helix family  55.36 
 
 
232 aa  238  6.999999999999999e-62  Desulfotomaculum acetoxidans DSM 771  Bacteria  unclonable  0.00000000315463  hitchhiker  0.000599707 
 
 
-
 
NC_006274  BCZK1193  response regulator  51.58 
 
 
223 aa  238  8e-62  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  51.58 
 
 
223 aa  238  8e-62  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1191  response regulator  51.58 
 
 
223 aa  238  9e-62  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  51.58 
 
 
223 aa  237  1e-61  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  51.58 
 
 
223 aa  237  1e-61  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  51.58 
 
 
223 aa  233  1.0000000000000001e-60  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0258  two component transcriptional regulator, winged helix family  51.97 
 
 
236 aa  231  5e-60  Eggerthella lenta DSM 2243  Bacteria  normal  0.606292  normal 
 
 
-
 
NC_011830  Dhaf_0940  two component transcriptional regulator, winged helix family  50.22 
 
 
237 aa  231  5e-60  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.324642  n/a   
 
 
-
 
NC_012793  GWCH70_1924  two component transcriptional regulator, winged helix family  48.65 
 
 
225 aa  229  2e-59  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  50 
 
 
227 aa  229  3e-59  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_013170  Ccur_11690  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  52.23 
 
 
236 aa  227  1e-58  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.52451  normal 
 
 
-
 
NC_013165  Shel_00330  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  51.79 
 
 
240 aa  226  3e-58  Slackia heliotrinireducens DSM 20476  Bacteria  decreased coverage  0.00972196  normal 
 
 
-
 
NC_013411  GYMC61_1696  two component transcriptional regulator, winged helix family  48.21 
 
 
224 aa  225  3e-58  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_0154  two component transcriptional regulator  47.6 
 
 
238 aa  225  4e-58  Clostridium phytofermentans ISDg  Bacteria  normal  0.644268  n/a   
 
 
-
 
NC_013203  Apar_1349  two component transcriptional regulator, winged helix family  50.45 
 
 
237 aa  224  6e-58  Atopobium parvulum DSM 20469  Bacteria  normal  normal  0.421984 
 
 
-
 
NC_010184  BcerKBAB4_3288  two component transcriptional regulator  49.56 
 
 
225 aa  223  2e-57  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0366247  n/a   
 
 
-
 
NC_011830  Dhaf_2286  two component transcriptional regulator, winged helix family  45.89 
 
 
231 aa  222  3e-57  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000000188753  n/a   
 
 
-
 
NC_010001  Cphy_2855  two component transcriptional regulator  48.66 
 
 
224 aa  222  4e-57  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000000952101  n/a   
 
 
-
 
NC_011725  BCB4264_A0316  DNA-binding response regulator  46.67 
 
 
237 aa  221  6e-57  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B1606  DNA-binding response regulator  48.23 
 
 
225 aa  221  7e-57  Bacillus cereus G9842  Bacteria  hitchhiker  0.00543423  hitchhiker  0.0000000112462 
 
 
-
 
NC_011725  BCB4264_A3709  DNA-binding response regulator  48.23 
 
 
225 aa  221  7e-57  Bacillus cereus B4264  Bacteria  unclonable  0.0000227696  n/a   
 
 
-
 
NC_011773  BCAH820_3612  DNA-binding response regulator  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  4.20142e-22 
 
 
-
 
NC_003909  BCE_3620  DNA-binding response regulator  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus cereus ATCC 10987  Bacteria  normal  0.0597824  n/a   
 
 
-
 
NC_011658  BCAH187_A3627  DNA-binding response regulator  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000000456124  n/a   
 
 
-
 
NC_005945  BAS3396  DNA-binding response regulator  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus anthracis str. Sterne  Bacteria  decreased coverage  0.0000765328  n/a   
 
 
-
 
NC_012803  Mlut_03750  PhoP-like protein  46.67 
 
 
226 aa  221  9.999999999999999e-57  Micrococcus luteus NCTC 2665  Bacteria  normal  0.181369  n/a   
 
 
-
 
NC_005957  BT9727_3358  transcriptional regulatory protein  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0000200566  n/a   
 
 
-
 
NC_006274  BCZK3308  transcriptional regulatory protein  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus cereus E33L  Bacteria  hitchhiker  0.000872353  n/a   
 
 
-
 
NC_007530  GBAA_3661  DNA-binding response regulator  48.23 
 
 
225 aa  221  9.999999999999999e-57  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  hitchhiker  0.000000222084  n/a   
 
 
-
 
NC_011830  Dhaf_1756  two component transcriptional regulator, winged helix family  46.15 
 
 
230 aa  220  1.9999999999999999e-56  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.769657  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5259  two component transcriptional regulator  47.81 
 
 
235 aa  219  1.9999999999999999e-56  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000559572  n/a   
 
 
-
 
NC_009674  Bcer98_2250  two component transcriptional regulator  48.23 
 
 
225 aa  219  1.9999999999999999e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000295266  n/a   
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  49.77 
 
 
236 aa  220  1.9999999999999999e-56  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1220  two component transcriptional regulator, winged helix family  46.67 
 
 
233 aa  220  1.9999999999999999e-56  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  hitchhiker  0.00991602 
 
 
-
 
NC_011725  BCB4264_A5589  DNA-binding response regulator YycF  47.81 
 
 
235 aa  219  3e-56  Bacillus cereus B4264  Bacteria  normal  0.0469644  n/a   
 
 
-
 
NC_009674  Bcer98_4006  two component transcriptional regulator  47.81 
 
 
235 aa  219  3e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.010356  n/a   
 
 
-
 
NC_008261  CPF_2180  DNA-binding response regulator  48.2 
 
 
223 aa  219  3e-56  Clostridium perfringens ATCC 13124  Bacteria  normal  0.0299585  n/a   
 
 
-
 
NC_011773  BCAH820_5572  DNA-binding response regulator YycF  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.81316e-29 
 
 
-
 
NC_003909  BCE_5615  DNA-binding response regulator YycF  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS5319  DNA-binding response regulator YycF  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus anthracis str. Sterne  Bacteria  normal  0.169223  n/a   
 
 
-
 
NC_005957  BT9727_5147  response regulator  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.00168683  n/a   
 
 
-
 
NC_006274  BCZK5163  response regulator  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus cereus E33L  Bacteria  hitchhiker  0.00196509  n/a   
 
 
-
 
NC_011658  BCAH187_A5650  DNA-binding response regulator YycF  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus cereus AH187  Bacteria  hitchhiker  0.00563499  n/a   
 
 
-
 
NC_007530  GBAA_5715  DNA-binding response regulator YycF  47.81 
 
 
235 aa  219  3.9999999999999997e-56  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.656882  n/a   
 
 
-
 
NC_008262  CPR_1891  DNA-binding response regulator  48.2 
 
 
223 aa  218  3.9999999999999997e-56  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_0264  two component transcriptional regulator  46.78 
 
 
238 aa  218  5e-56  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.392693  n/a   
 
 
-
 
NC_011772  BCG9842_B5346  DNA-binding response regulator YycF  48.25 
 
 
235 aa  218  5e-56  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000234523  hitchhiker  0.00000000000323141 
 
 
-
 
NC_011772  BCG9842_B4998  DNA-binding response regulator  45.22 
 
 
237 aa  218  7e-56  Bacillus cereus G9842  Bacteria  normal  0.709524  normal 
 
 
-
 
NC_013595  Sros_0961  response regulator receiver protein  45.58 
 
 
229 aa  218  8.999999999999998e-56  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010180  BcerKBAB4_5511  two component transcriptional regulator  46.19 
 
 
236 aa  216  2e-55  Bacillus weihenstephanensis KBAB4  Bacteria  normal  normal  0.567595 
 
 
-
 
NC_008262  CPR_2497  DNA-binding response regulator  47.77 
 
 
228 aa  216  2e-55  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0132  response regulator receiver protein  47.77 
 
 
231 aa  216  2.9999999999999998e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  47.32 
 
 
228 aa  215  5e-55  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1367  two component transcriptional regulator, winged helix family  47.35 
 
 
230 aa  215  5e-55  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000177207  n/a   
 
 
-
 
NC_008531  LEUM_1950  DNA-binding response regulator  46.55 
 
 
235 aa  214  5.9999999999999996e-55  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.100456  n/a   
 
 
-
 
NC_010001  Cphy_1954  two component transcriptional regulator  44.84 
 
 
229 aa  214  7e-55  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000155813  n/a   
 
 
-
 
NC_012793  GWCH70_3409  two component transcriptional regulator, winged helix family  49.78 
 
 
236 aa  214  8e-55  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0258  response regulator  45.02 
 
 
237 aa  214  9e-55  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6145  two component transcriptional regulator  45.74 
 
 
228 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  normal  0.788201 
 
 
-
 
NC_010320  Teth514_0439  two component transcriptional regulator  45.95 
 
 
225 aa  213  9.999999999999999e-55  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000223011  n/a   
 
 
-
 
NC_008578  Acel_0088  two component transcriptional regulator  47.14 
 
 
228 aa  214  9.999999999999999e-55  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009253  Dred_0707  two component transcriptional regulator  48.26 
 
 
232 aa  213  9.999999999999999e-55  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0170  two component transcriptional regulator, winged helix family  44.44 
 
 
232 aa  213  1.9999999999999998e-54  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_3538  two component transcriptional regulator, winged helix family  49.78 
 
 
237 aa  213  1.9999999999999998e-54  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_005957  BT9727_0255  DNA-binding response regulator  45.58 
 
 
237 aa  213  2.9999999999999995e-54  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_2910  response regulator receiver  44.05 
 
 
230 aa  213  2.9999999999999995e-54  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
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