| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_0268 |
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| Symbol | |
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| ID | 8542647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 397065 |
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| End bp | 397748 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646385064 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_003264802 |
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| Protein GI | 262193593 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.509377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACCCGG CCCGCATCCT CGTCGCCGAC GATGAATCCA ACATCCGCGA CGTCGTCCAG
TACGCGCTCG AACGCGACGG CTATCGCGTC GAGACCGCGG CCGACGGCCA GAGCGCGCTC
GCGCGCATCG AGGCCGGCGG CATCGATCTG GTGATCCTCG ACGTGCTCAT GCCCGAGCTC
GACGGCCTCA ATCTGTGCCG CAAGCTGCGC GAGCGCGGCG ACGTGCCCAT CATTTTTCTG
TCCTCGCGCA GCGAGGAGGC CGACCGCATC CTGGGCCTCG AGCTCGGCGG CGACGACTAC
GTGACCAAGC CCTTCAGCCC GCGCGAGCTG GCCACCCGGG TCAAGGCCGT GTTGCGCCGC
GTGGCTGCCC GCCGCGGCGC CGATGACGCG CCCCCGGCTC TGGTCTACGA GCGCCTCACC
CTCGACCCCG CGGCCCACGA GCTGCGCGTG GACGACGACA AGATCGCGCT CACGGTCACC
GAGTTCCGCG TCCTGCACGC GATCCTCGAA CGCCCCGGCC GGGTGCTCAC GCGCTCACAG
CTCATCGACC GCGCGTACGA GGACGGTCTG CACGTGAGCG AGCGAACCAT CGACACGCAT
ATCCGCCGTA TCCGCGCCAA GCTGCGCCCC TACGGCATCG AGGCGATCGA GACCGTCCAT
GGACTCGGCT ACAAAACCCC CTGA
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| Protein sequence | MNPARILVAD DESNIRDVVQ YALERDGYRV ETAADGQSAL ARIEAGGIDL VILDVLMPEL
DGLNLCRKLR ERGDVPIIFL SSRSEEADRI LGLELGGDDY VTKPFSPREL ATRVKAVLRR
VAARRGADDA PPALVYERLT LDPAAHELRV DDDKIALTVT EFRVLHAILE RPGRVLTRSQ
LIDRAYEDGL HVSERTIDTH IRRIRAKLRP YGIEAIETVH GLGYKTP
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