Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_2709 |
Symbol | |
ID | 7269616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | - |
Start bp | 3323786 |
End bp | 3324496 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 643567535 |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_002464013 |
Protein GI | 219849580 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0011921 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGAA CGATTCTAGT TGTTGATGAT GAACCCGGCA TCGTCAAAAT TGCCCGCGAC TACCTCGAAC GAGCCGGCTT CCACGTGATC AGCGCCGGCG ATGGACCCAG CGCGCTGCGA TTGGCCCGCC AAGAGCACCC ATCGCTGATC GTGCTCGATT TGATGTTGCC TGGGATGGAC GGACTAGACG TTACACGCGC ACTCCGTCAA GATCCGCTCA CCGCCGGCGT ACCGATCATC ATGCTCACCG CGCGCGTCGA AGAGACCGAC CGCTTGATCG GCCTTGAATT AGGTGCCGAC GATTACATCA CCAAACCCTT CAGCCCACGT GAACTGGTTG CGCGTGTGCG CGCAGTACTT CGACGGATTG AAGGGCACCT CCAACCGACA AAGGTGATAC AAGCCGGCCG ATTGACCATC GATCTCGAAC GGCGAATCGT TCGTCGCGAT AATGAGATCA TTGAGCTGAC TGCTACCGAG TTTGAGTTGC TCACCATTCT TGCCAGTGCG CCAGGACGAC CGTTCACCCG TGCCCAATTG CTTGATCGCA TCTATAATAC CAACTATATC GGTTTCGACC GCACCATCGA TGCCCATATT AAAAATCTGC GTCGTAAGAT CGAGCCTGAT CCAAATGGCC CACCACGCCT CATTTTGACG GTGTACGGCG TCGGGTACAA GTTTGCCGAA CCGGATGCAT ATAATCAGTG A
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Protein sequence | MKRTILVVDD EPGIVKIARD YLERAGFHVI SAGDGPSALR LARQEHPSLI VLDLMLPGMD GLDVTRALRQ DPLTAGVPII MLTARVEETD RLIGLELGAD DYITKPFSPR ELVARVRAVL RRIEGHLQPT KVIQAGRLTI DLERRIVRRD NEIIELTATE FELLTILASA PGRPFTRAQL LDRIYNTNYI GFDRTIDAHI KNLRRKIEPD PNGPPRLILT VYGVGYKFAE PDAYNQ
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