| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cagg_2709 |
|---|
| Symbol | |
|---|
| ID | 7269616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chloroflexus aggregans DSM 9485 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011831 |
|---|
| Strand | - |
|---|
| Start bp | 3323786 |
|---|
| End bp | 3324496 |
|---|
| Gene Length | 711 bp |
|---|
| Protein Length | 236 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643567535 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002464013 |
|---|
| Protein GI | 219849580 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.0011921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAA CGATTCTAGT TGTTGATGAT GAACCCGGCA TCGTCAAAAT TGCCCGCGAC
TACCTCGAAC GAGCCGGCTT CCACGTGATC AGCGCCGGCG ATGGACCCAG CGCGCTGCGA
TTGGCCCGCC AAGAGCACCC ATCGCTGATC GTGCTCGATT TGATGTTGCC TGGGATGGAC
GGACTAGACG TTACACGCGC ACTCCGTCAA GATCCGCTCA CCGCCGGCGT ACCGATCATC
ATGCTCACCG CGCGCGTCGA AGAGACCGAC CGCTTGATCG GCCTTGAATT AGGTGCCGAC
GATTACATCA CCAAACCCTT CAGCCCACGT GAACTGGTTG CGCGTGTGCG CGCAGTACTT
CGACGGATTG AAGGGCACCT CCAACCGACA AAGGTGATAC AAGCCGGCCG ATTGACCATC
GATCTCGAAC GGCGAATCGT TCGTCGCGAT AATGAGATCA TTGAGCTGAC TGCTACCGAG
TTTGAGTTGC TCACCATTCT TGCCAGTGCG CCAGGACGAC CGTTCACCCG TGCCCAATTG
CTTGATCGCA TCTATAATAC CAACTATATC GGTTTCGACC GCACCATCGA TGCCCATATT
AAAAATCTGC GTCGTAAGAT CGAGCCTGAT CCAAATGGCC CACCACGCCT CATTTTGACG
GTGTACGGCG TCGGGTACAA GTTTGCCGAA CCGGATGCAT ATAATCAGTG A
|
|---|
| Protein sequence | MKRTILVVDD EPGIVKIARD YLERAGFHVI SAGDGPSALR LARQEHPSLI VLDLMLPGMD
GLDVTRALRQ DPLTAGVPII MLTARVEETD RLIGLELGAD DYITKPFSPR ELVARVRAVL
RRIEGHLQPT KVIQAGRLTI DLERRIVRRD NEIIELTATE FELLTILASA PGRPFTRAQL
LDRIYNTNYI GFDRTIDAHI KNLRRKIEPD PNGPPRLILT VYGVGYKFAE PDAYNQ
|
|---|
| |