Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmob_0875 |
Symbol | |
ID | 5758332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Petrotoga mobilis SJ95 |
Kingdom | Bacteria |
Replicon accession | NC_010003 |
Strand | + |
Start bp | 929593 |
End bp | 930321 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 641302084 |
Product | two component transcriptional regulator |
Protein accession | YP_001567921 |
Protein GI | 160902340 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000486966 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAAAA AAAGTATTAT GATAGTAGAA GACGATCCGG CGATCTCTGA AATGTTATCT TTGAACTTGA CCAAAGAAGG TTACGAAGTA ATAACGGCTG TGTCTGCTGA TGAGGCTTTA AAGAAATTAG AGGAAAAAGA TACCGACTTT TTCATAGTGG ATATTATGTT ACCAGGTTCA ATGGATGGAT TTGATTTAAT TAGAATCTTG AAATCCAGCG AAGATTATCG CAATACGCCC GTACTCATAT TGAGTGCCAA AGATGATGCT GCTGATAAAG TAGCTGGGTT AGAACTTGGT AGCGATGATT ATGTCACTAA ACCTTTTAAT GTAAGAGAAC TAATTGCAAG AATTAAAAGC ATATTTAGGA GACAAGCTGC ATCAGCTCAA ATGAAAGAAG AAGGACCCAA AAAAATTACA GCTAAAGATT TAATTATCGA CACTGAAAGA TTAGAAGTTT GGGTAGGGGG AAATCCAGTC AGCCTTACCC CGTTGGAGTT CGATTTGTTA GTTTTTCTTG CTAAAAATGA AGGAAAAGTC TTTAGTCGAG ATGTATTGTT GGATAAATTG TGGGGTTATG ACTACTACGG AGATACAAGA ACAGTAGACG TTCATATCAG AAGGTTGAGA ACAAAGATCG AAGAAGATCC TTCTAATCCA AAATACATAA TTACAGTAAG AGGGAAAGGA TACAAATTCA GAGATCCTGG AAAGGAAAGA AACTACTAA
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Protein sequence | MAKKSIMIVE DDPAISEMLS LNLTKEGYEV ITAVSADEAL KKLEEKDTDF FIVDIMLPGS MDGFDLIRIL KSSEDYRNTP VLILSAKDDA ADKVAGLELG SDDYVTKPFN VRELIARIKS IFRRQAASAQ MKEEGPKKIT AKDLIIDTER LEVWVGGNPV SLTPLEFDLL VFLAKNEGKV FSRDVLLDKL WGYDYYGDTR TVDVHIRRLR TKIEEDPSNP KYIITVRGKG YKFRDPGKER NY
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