Gene Ccel_1892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCcel_1892 
Symbol 
ID7310615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium cellulolyticum H10 
KingdomBacteria 
Replicon accessionNC_011898 
Strand
Start bp2248286 
End bp2248972 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content39% 
IMG OID643608826 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002506220 
Protein GI220929311 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000392 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAGCA AAAGTAAAGT ATTAATAGTT GATGATGACA GAAATATATG TGAGTTGATA 
GGGCTATACC TTGAAAAAGA AGGATACGAA GTCCTTTACG CTTATAACGG GTTAAATGCT
GTTGATACAT TTAAAATACA GACTCCTAGC CTGGTAGTTC TGGATATTAT GCTTCCCGGA
ATTGACGGAT GGCAGGTATG CAGGGAAATA AGAAAGGTAA GCTCTATCCC TATTATCATG
TTAACTGCAA AAGGTGAGAC CTTTGACAAA GTCCTTGGAC TCGAGCTGGG AGCAGATGAT
TACATGGTTA AGCCCTTTGA GCCTAAAGAG CTTGTTGCAA GGGTAAAGGC AGTATTGAGG
AGATATGAGT ATAAGGAAGT TGATACCCAG GAAGTTGCAT TTCCAAATCT CATTATAAAT
AAAAGTAACT ATACAATCAG GCTTAAGGGT AACCTAATCG AACTTCCTCC AAAGGAACTG
GAACTCTTGT TTTTTCTTGC ATCAAATCCA AACAAGGTTT TTACAAGGGA ACAACTCTTG
GAGCGTGTAT GGGGATTTGA TTTTTATGGA GATTCCAGAA CGGTTGATGT ACATGTAAAG
AGGGTTCGTG AAAAAATAGA TCTCGAAGGG CAGCCATGGC AGTTAAAAAC CGTATGGGGT
GTTGGCTACA AGTTCGAGGT GAAATAA
 
Protein sequence
MSSKSKVLIV DDDRNICELI GLYLEKEGYE VLYAYNGLNA VDTFKIQTPS LVVLDIMLPG 
IDGWQVCREI RKVSSIPIIM LTAKGETFDK VLGLELGADD YMVKPFEPKE LVARVKAVLR
RYEYKEVDTQ EVAFPNLIIN KSNYTIRLKG NLIELPPKEL ELLFFLASNP NKVFTREQLL
ERVWGFDFYG DSRTVDVHVK RVREKIDLEG QPWQLKTVWG VGYKFEVK