Gene Dtox_1554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDtox_1554 
Symbol 
ID8428516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum acetoxidans DSM 771 
KingdomBacteria 
Replicon accessionNC_013216 
Strand
Start bp1624269 
End bp1624958 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content45% 
IMG OID645033888 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_003191039 
Protein GI258514817 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00709514 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCACAGA GAATTTTAAC GGTTGACGAT GACCCGAAAA TATTAAAAAT CTTACAGCAC 
AGTCTTGGTA AGGAAGGCTT TGAAGTGATA ACTGCATCCA GTGGTGAGGA GGCTTTGCAA
AAAGCCAGGC AATCATCACC CGACTTGGTT ATACTGGACC TAATGATGCC TGGTATGGAC
GGTTTTGAAA CTTACCAGAA GCTGAAGGCG CAGCGGGAGG TGCCGATAAT TATCCTATCC
GCCAGGACCG AAGAGGTGGA TCGGGTGGTA GGGTTTAGGA TGGGGGTAGA CGATTACCAG
ACCAAGCCCT TTAGTCCCAC TGAGTTGGCC TTGCGGGTGA AAGCTGTTTT GAGAAGACTT
GGTGAGCCAA AGGTTAACCT TGAAAATATG TTGAAATATG GTAACTTGAC TCTGGATTAC
ACGAAGCGTA CCGTTGCGGT GAATAACAGT AAGGTTGAAC TGACTCCGAA GCAATTTGAA
CTACTTTGGT TGATGGCCTC CAATCCAAAC CGGGTATTTA CCAAAGCGCA CCTGCTGGAT
AAAATATGGG ACAGCTCTTT TTACGGCGAT GATAATACAG TTACTGTTCA TATCAGGAGA
CTGCGCGAAA AGGTTGAAAC CGATCCTTCA AATCCTGAAT ATATAAAAAC CGTCTGGGGA
ATGGGATATA AATTTGAGTA CGAGGGTTAA
 
Protein sequence
MPQRILTVDD DPKILKILQH SLGKEGFEVI TASSGEEALQ KARQSSPDLV ILDLMMPGMD 
GFETYQKLKA QREVPIIILS ARTEEVDRVV GFRMGVDDYQ TKPFSPTELA LRVKAVLRRL
GEPKVNLENM LKYGNLTLDY TKRTVAVNNS KVELTPKQFE LLWLMASNPN RVFTKAHLLD
KIWDSSFYGD DNTVTVHIRR LREKVETDPS NPEYIKTVWG MGYKFEYEG