Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0987 |
Symbol | |
ID | 8567627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 1122105 |
End bp | 1122806 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003290269 |
Protein GI | 268316550 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.195539 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCGC GCATTCTGAT CGTCGAAGAC GATACGCCGC TGCGGGCGCT GCTGCAGGAG CGACTGGCGG CCGAGGGCTA TGCGGTCGAG GCCGTCGCCA CGGGCGAGGA AGCACTGCAG GCGCTGGAGG CCCGGCCGCC GGACCTGGTG GTGCTGGACC TGATGCTGCC GGGTATGGAC GGGCTGGAGG TGTGTCGCCG GTTGCGGGCA CGCCATCCGG CCGTGTACGT GCTGATGCTC ACGGCACGCT CGAGCGAACT GGATCGCGTG GTCGGGCTGG AAGTCGGGGC CGACGATTAC GTGACCAAGC CGTTCAGCCT GAACGAACTG GTGGCGCGCG TGCGGGCCGG ATTGCGTCGG CTGCAACTGG ATCGGGAGAC GGCCGACGAG GCGCCGCTGG AATTTGACGG ACTGCGCATC GATCCGGTGC GACGGCAGGT CTGGCGCGAC GGACAGCCCG TACACCTGAC CGTCCGGGAA TTCGAGCTGC TGCTGTTTCT GGCCCGGCAT CCGGATCGGC CGTTCACCCG GCTGCAACTG CTCCGCGAGG TCTGGGGCAT TGACTATCCC GGCTATGCGC GGACGGTCGA TTCGCACATC CAGCGGCTTC GGGCCAAGAT CGAACCCACC CCAGGCGCGC CGCGCTACAT CCGGACGGTC TGGGGCGTCG GCTACAAGTT TCAATCGAGT GAAGAGCCAT GA
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Protein sequence | MSARILIVED DTPLRALLQE RLAAEGYAVE AVATGEEALQ ALEARPPDLV VLDLMLPGMD GLEVCRRLRA RHPAVYVLML TARSSELDRV VGLEVGADDY VTKPFSLNEL VARVRAGLRR LQLDRETADE APLEFDGLRI DPVRRQVWRD GQPVHLTVRE FELLLFLARH PDRPFTRLQL LREVWGIDYP GYARTVDSHI QRLRAKIEPT PGAPRYIRTV WGVGYKFQSS EEP
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