Gene Mchl_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_0931 
Symbol 
ID7114698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp946786 
End bp948159 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content69% 
IMG OID643523733 
Productresponse regulator receiver modulated diguanylate cyclase 
Protein accessionYP_002419776 
Protein GI218528960 
COG category[T] Signal transduction mechanisms 
COG ID[COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.436852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.104843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCTC GCGTCCTGAT CGTGGATGAT CTCTACCCCA ACGTCCGGCT GCTCGAGACA 
AAACTGTCTC TCGAGTATTT CGACGTGGTC GTGGCGATGA ATGGGCCAGA CGCCCTGGCC
ATTTGCGAGA AGGGCGAATG CGACGTCGTT CTCCTCGACG TGATGATGCC GGGCATGGAC
GGCTTCGAGG TTTGCCGCCG GCTCAAGGCC AATCCCGCCA CCGCCCATCT GCCGGTGGTG
ATCGTCACCG CCCTCGATCA GCCCGCCGAC CGGCTGCGGG GCCTGGATGC GGGCGCCGAC
GATTTCCTGA CCAAGCCCAT CGACGACACC GCGCTGATGA CGCGGGTGCG TAGCCTCGTG
CGGCTGAAGG CGGTGACGGA CGAGCTGCGC TCCCGCGCCC TGGAAACGCG CGAGATCGGC
GGCCCCGACC CCCTGGTTCT CGCCGCCGCC GATACCGGCG AGGGTGCGCG CATTCTCCTC
GTGGAGGACC GGGCGAGCGC CATCGACCGC ATCAGCACGG CGCTCTCCCA GCACCATCAG
GTCACCGTGG AAACCGACCC GCACCGCGCC CTGGTGCGGG CGCCCGAGGA AGGCTTCGAC
CTCGCCCTGG TGAGCCTCGA TCTCGAAGGC TTCGACGGGC TGCGCCTGTG CAGCCAGCTC
CGATCGCTGG AGCGGACCCG CAGCATGGCG CTGATCATGC TCGGCGAGAT GCACGAGAAA
ACGCGCATCA CCCGCGGCCT CGAATTCGGC GTCAACGACT ACCTGCTGCG TCCGGTCGAC
CGCAACGAGC TGATCGCGCG GGTGCGCACG CAGGTGCGGC GGCGGCGCTT CTCCGAGACC
CTGCGCGGGG CGCTCCATGC CTCGATGGAA CTCGCCATCA CCGACGACCT GACCGGCCTG
CACAACCGGC GCTACCTCGA CCGCCATCTC GGGCCGGTCT TCGGTGAGGC GGCTTTGCAG
GAGAAGGGAC TCGCCTGCCT GCTCCTCGAC ATCGACCGCT TCAAGCTGAT CAACGACACC
TACGGCCACG AGGCCGGCGA CGAGGTGCTG CGCGCCTTCG CCGAGCGCAT CCGCCAGTAT
GTACGGCCGA TGGACATCCT CGCCCGCTAC GGCGGCGAGG AGATCGTGAT GGTGGTGCCC
GGTGCCGAAC TGCCCGATGC CCGCGCCATC GCCGAGCGCA TCCGCCACCG GATCGAGGCG
ACGCCCTTCG CCATCGACGG CGGGACGCGC GACATCGGCG TGACCGTCTC GGTCGGCGTC
TCCGTGCGGC GCGCGACCGA TACGGGTCCG TCCGACCTGC TCAAGCGCGC CGACACCGCG
CTCTACCGCG CCAAGTCCTT CGGCCGGAAC CGGGTCGAGG CGGCAGCCGC GTAG
 
Protein sequence
MSARVLIVDD LYPNVRLLET KLSLEYFDVV VAMNGPDALA ICEKGECDVV LLDVMMPGMD 
GFEVCRRLKA NPATAHLPVV IVTALDQPAD RLRGLDAGAD DFLTKPIDDT ALMTRVRSLV
RLKAVTDELR SRALETREIG GPDPLVLAAA DTGEGARILL VEDRASAIDR ISTALSQHHQ
VTVETDPHRA LVRAPEEGFD LALVSLDLEG FDGLRLCSQL RSLERTRSMA LIMLGEMHEK
TRITRGLEFG VNDYLLRPVD RNELIARVRT QVRRRRFSET LRGALHASME LAITDDLTGL
HNRRYLDRHL GPVFGEAALQ EKGLACLLLD IDRFKLINDT YGHEAGDEVL RAFAERIRQY
VRPMDILARY GGEEIVMVVP GAELPDARAI AERIRHRIEA TPFAIDGGTR DIGVTVSVGV
SVRRATDTGP SDLLKRADTA LYRAKSFGRN RVEAAAA