Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | GM21_2710 |
Symbol | |
ID | 8138052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter sp. M21 |
Kingdom | Bacteria |
Replicon accession | NC_012918 |
Strand | - |
Start bp | 3154568 |
End bp | 3156682 |
Gene Length | 2115 bp |
Protein Length | 704 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644870314 |
Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_003022504 |
Protein GI | 253701315 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.00325078 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGACCA GGAAAGCCAA GCGCAGCACT CCGCTCGTCA TGGTCGTCGA CGACGACCAG GCGGTGCGCC TTCTGGCCCG GGAGACCCTG GAGAGTTCGG GCTTCGCGGT GCGCGACGTG GAAAACGGCG AGCAGGCGCT GGAGGAGTTC GATGCTCACG CACCCGACAT CGTGCTCCTG GACGTGATGA TGCCGGGCAT CGACGGCTTC TCCGTCTGCA GCGCCATCCG GCGCACCGCG TCCGGGCGGG ACACGCCGGT TTTGATGATG ACAGGCCTGG ACGACCTGGA ATCCATCGAC TGCGCCTACG AGGCTGGGGC CACCGATTTC ATCACCAAAC CGATCAACTG GCACGTGCTC GGGTACCGGG TGAGCTACAT GCTGAGGGCG AGCGGCGCCC TGGAGCAGTT GAGGGAGAGC AGGGCGGGTT TAGCCCACGC CCAGAGCCTC GCCCACATCG GGAGTTGGGA GTGGGACCTG GCCACCGGCG AAATCCGCTG CTCCGAGGAG GTCTACAGCA TCTGCAGCAT CGACCGCTCA CTCAAAGGGG GGAACCCCAT CCTCGACCCG GTGCACCCCC TGGACCTGGG TTTCGTGCAG GGGGCCATCG AGGAGGCGAT CGGAAAGCGC GCACCGCTCT CCTTCGATTA CCGGATCACG CTGGGGGCGG GAGAGCGCAC CCTGCACGCC GAACTGGTGA CGGTGCTGGA CGAGCAGGGC GAGCCGGTCT GCCTCACCGG GACCATACAG GACATCACGG AGAGAAAGCA CGCCGAGGAG CAGATCCGGC TCCTGGCTTA CTACGACGCT CTGACCGGTC TTCCCAACCG CCGCTTCTTC CTGCAGCAGT TGGAGCAGGC ACTGGTCTTC GCCAACCGGC ACGACCGCAT GCTGGCGGTC CTCTTCCTCG ACCTTGACCG CTTCAAACTG GTGAACGACA CCCTCGGGCA CGGGGTGGGG GACCGCTTGC TGCAGGACGT GGCCGACCGC CTGCTCCGCT GCGTCCGCAG GGGGGACTGT CTCGCCCGCG CCGACGAGGA GTGCCCACCC TCCCTGGTCT CGCGCCTGGG AGGGGACGAG TTCACCATCA TGCTCTGCGA CATCGAGCAC TTCCAGGACG TGGCGAAGAT CGCCCGGCGC ATCCTGGAGG CCGTATCCGT TCCCTATTCG CTGGAGGGGC AGGAGGTCTT CGTCTCCACC AGCATCGGCA TCAGCCTCTA CCCCTTCGAC GCCACCACGG CGAGCGACCT GATCCGTAAC GCGGACGGCG CCATGTACCA GGCCAAGGAG CAGGGTAGAA ACGGCTACCA GATCTACGAC GAGTCGATGA ACGCGAAGGC CTTGGAGCGG ATCATACTGG AAAGCCAGCT GCATAAGGCG CTCAAGGAGG AGGAGTTCAC CGTCTATTAC CAGCCGCAGG TCTCAAGCCA AACGGGGCTC GTGGTAGGGA TCGAGGCGCT GGTGCGCTGG AACTCAAAGG AGCTGGGGCT CGTCGAGCCG GGCCGTTTCC TGCCGCTGGC CGAGGAAATC GGGCTGGTGA TCCAGATCGA CCAGTGGGTG ATGCGGGAAG CCTGCCGGCA GCACAAGCTC TGGCTGGACG CAGGGCTCCC GCCGGTGACG CTCGCCATCA ACATCTCAGG GCAGCAGTTC ATGAAAAACG AGCTTTTGGA GACGGTGACG TCGGTCCTGA AAGAGAGCGG GCTCGACCCT GGGCTCTTGG AGCTGGAACT CACCGAGGGG GTACTCATGG CGCACACCGA GCGCACCGTG AAGACGCTGC AGGCCCTGAA AGGGATGGGG GTGAGGCTCG CCATCGACGA CTTCGGGACC GGCTTCTCCT CGCTCTCCTA TTTGAAGCGC TTCCCGCTCG ACGTCCTCAA GATCGACCGG ACCTTCATCA ACGACATCAC CACCGACCCC GACGACGCCG CCATCACCCT CGCCACCATC GAGATGGCGC ACACGCTGAA GCTGAAGGTG ATCGCGGAGG GGGTCGAGAC CAAGCCCCAG CTGGAGTTCC TCACCAAAAA CGGCTGCGAC ATGTACCAGG GTTACCTGTT CAGCAAACCG GTCCCCTCTA CGGAGCTTCC CCGCCTTTTC AACTGCCGGC AGTAG
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Protein sequence | MLTRKAKRST PLVMVVDDDQ AVRLLARETL ESSGFAVRDV ENGEQALEEF DAHAPDIVLL DVMMPGIDGF SVCSAIRRTA SGRDTPVLMM TGLDDLESID CAYEAGATDF ITKPINWHVL GYRVSYMLRA SGALEQLRES RAGLAHAQSL AHIGSWEWDL ATGEIRCSEE VYSICSIDRS LKGGNPILDP VHPLDLGFVQ GAIEEAIGKR APLSFDYRIT LGAGERTLHA ELVTVLDEQG EPVCLTGTIQ DITERKHAEE QIRLLAYYDA LTGLPNRRFF LQQLEQALVF ANRHDRMLAV LFLDLDRFKL VNDTLGHGVG DRLLQDVADR LLRCVRRGDC LARADEECPP SLVSRLGGDE FTIMLCDIEH FQDVAKIARR ILEAVSVPYS LEGQEVFVST SIGISLYPFD ATTASDLIRN ADGAMYQAKE QGRNGYQIYD ESMNAKALER IILESQLHKA LKEEEFTVYY QPQVSSQTGL VVGIEALVRW NSKELGLVEP GRFLPLAEEI GLVIQIDQWV MREACRQHKL WLDAGLPPVT LAINISGQQF MKNELLETVT SVLKESGLDP GLLELELTEG VLMAHTERTV KTLQALKGMG VRLAIDDFGT GFSSLSYLKR FPLDVLKIDR TFINDITTDP DDAAITLATI EMAHTLKLKV IAEGVETKPQ LEFLTKNGCD MYQGYLFSKP VPSTELPRLF NCRQ
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