| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mpop_0907 |
|---|
| Symbol | |
|---|
| ID | 6312715 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium populi BJ001 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010725 |
|---|
| Strand | + |
|---|
| Start bp | 960867 |
|---|
| End bp | 962240 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642649623 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001923620 |
|---|
| Protein GI | 188580175 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.401363 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.40647 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCTC GCGTCCTGAT CGTGGATGAT CTCTACCCCA ACGTCCGATT GCTCGAGACG
AAGCTGTCTC TCGAGTATTT CGACGTGGCC GTGGCGATGA ACGGGCCCGA CGCGCTGGCG
ATCTGCGAGA AGGGTGCCTG CGACGTCGTG CTCCTCGACG TGATGATGCC GGGCATGGAC
GGGTTCGAGG TCTGCCGCCG GCTGAAGTCG AACCCCGTGA CCGCCCATCT GCCGGTGGTG
ATCGTCACCG CCCTCGACCA GCCCGCCGAC CGGCTGCGCG GCCTCGACGC CGGGGCCGAC
GACTTCCTGA CCAAGCCCAT CGACGACACC GCGCTGATGA CGCGGGTGCG CAGCCTCGTG
CGACTGAAGG CGGTCACCGA CGAGTTGCGC TCGCGCGCCC TGGCGACCCG GGAGATCGGC
GGGCCCGATC CCCTGGCGCT GGCTGCCGCC GACACCGGCG AGGGCGCCCG CATCCTCCTC
GTGGAGGATC GGCCGAGCGC CATCGACCGG ATCGGCACGG CGCTCTCGCA GCACCATCAG
GTCACCGTCG AGACCGATCC GCACCGGGCC CTGGTGCGGG CGCCGGAGGG CGGGTTCGAC
CTCGCCCTGG TGAGCCTCGA CCTCGAAGGA TTCGACGGCC TGCGCCTGTG CAGCCAGATC
CGCTCGCTGG AGCGGACCCG CAACATGGCG CTGATCATGA TCGGCGAAAT GCACGAGAAG
GCCCGCATCA CCCGCGGCCT CGATTTCGGC GTCAACGACT ACCTGCTGCG CCCGATCGAC
CGCAACGAAC TGATCGCGCG GGTCCGCACG CAGGTGCGGC GGCGGCGCTT CTCGGAGACC
CTGCGCGGGG CGCTCCAGGC CTCGATGGAA CTGGCGATCA CCGACGACCT GACGGGGCTG
CACAACCGGC GCTACCTCGA CCGGCATCTC GGCCCGGTCT TCGGCGAGGC GGCGCTGCAG
CAGAAGGGCC TCGCCTGCCT GCTCCTCGAC ATCGACCGCT TCAAGTCGAT CAACGACACC
TACGGCCACG AGGCCGGCGA CGAGGTGCTG CGCGCCTTCG CCGAGCGCAT CCGCCAGTAC
GTGCGGCCGA TGGACATCCT GGCCCGCTAC GGCGGCGAGG AGATCGTGAT GGTGGTGCCC
GGCGCGGAAC TGCCCGATGC CCGCGCCATC GCAGAGCGCA TCCGCGAGCG GATCGAGGCG
ACGCCGTTCG CGATCGACGG GGGAACCCGC GACATCGGCG TGACCGTCTC GGTCGGCGTC
TCCGTGCGCC GCACCACCGA TACCGGCCCG GCCGACCTGC TCAAGCGCGC CGACACCGCC
CTCTACCGCG CCAAGTCCTC GGGCCGGAAC CGGGTCGAGG CGGCGGCGGC GTAG
|
|---|
| Protein sequence | MSARVLIVDD LYPNVRLLET KLSLEYFDVA VAMNGPDALA ICEKGACDVV LLDVMMPGMD
GFEVCRRLKS NPVTAHLPVV IVTALDQPAD RLRGLDAGAD DFLTKPIDDT ALMTRVRSLV
RLKAVTDELR SRALATREIG GPDPLALAAA DTGEGARILL VEDRPSAIDR IGTALSQHHQ
VTVETDPHRA LVRAPEGGFD LALVSLDLEG FDGLRLCSQI RSLERTRNMA LIMIGEMHEK
ARITRGLDFG VNDYLLRPID RNELIARVRT QVRRRRFSET LRGALQASME LAITDDLTGL
HNRRYLDRHL GPVFGEAALQ QKGLACLLLD IDRFKSINDT YGHEAGDEVL RAFAERIRQY
VRPMDILARY GGEEIVMVVP GAELPDARAI AERIRERIEA TPFAIDGGTR DIGVTVSVGV
SVRRTTDTGP ADLLKRADTA LYRAKSSGRN RVEAAAA
|
|---|
| |