Gene Acid345_2479 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcid345_2479 
Symbol 
ID4072103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Koribacter versatilis Ellin345 
KingdomBacteria 
Replicon accessionNC_008009 
Strand
Start bp2935311 
End bp2935925 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content56% 
IMG OID637984496 
Productresponse regulator receiver protein 
Protein accessionYP_591554 
Protein GI94969506 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.303056 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACT CGATGCACGT GCTAGCGGTT GACGACAACC GGATTCACTC GTACGCGCTG 
GAAAAAACTC TCAGCAACAT CGGCTTCCAA GTAAAGGCAG TTCACACGGG ACAGGATGCA
CTCTGCGAAC TGCGTAGCAA ACGATACGAT GCCGTCTTGT TGGATGTGAA CCTGCCGGAG
ATGAACGGAT TTGAAATTTG CTCGGCGATT CGCAGCGACG GCAAGATCCA ACAACCGGCG
ATCGTCTTTC ATTCCGCGAC CCATGCCTCA GAAGCGACCT TTGCAACTGC ACGCGAGGTC
GGAGGGGACG CATTCCTGAC CTACCCGATT GAGACGGAAG CATTGAAGGC CGTTCTGACG
CGAGCGATTG AATCGCGCCG AAGCACGGAC GGAAAACCGA TGCTTAGCTG TTGGAAGGAC
ATCGCGAGGT TCTTCAACAA GGGCGTGCGG ACGGTGCAAC GCTGGGAGGC GATGGGAATG
CCGGTGCATC GACCGCAGCG CGACAAGAAC ATCGTATTCG CCGATCCTGA AGAGTTGCGG
CGCTGGGCCT ATTCGAATCT GCGAGAGCAC AAGCAGAAGA GCCAATCTGC CGGCAACAGT
AGCTCCACTT CCTGA
 
Protein sequence
MPNSMHVLAV DDNRIHSYAL EKTLSNIGFQ VKAVHTGQDA LCELRSKRYD AVLLDVNLPE 
MNGFEICSAI RSDGKIQQPA IVFHSATHAS EATFATAREV GGDAFLTYPI ETEALKAVLT
RAIESRRSTD GKPMLSCWKD IARFFNKGVR TVQRWEAMGM PVHRPQRDKN IVFADPEELR
RWAYSNLREH KQKSQSAGNS SSTS