Gene VIBHAR_01620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVIBHAR_01620 
Symbol 
ID5552941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio harveyi ATCC BAA-1116 
KingdomBacteria 
Replicon accessionNC_009783 
Strand
Start bp1628443 
End bp1630863 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content48% 
IMG OID640907111 
ProductSignal transduction histidine kinase 
Protein accessionYP_001444817 
Protein GI156973910 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAATTC GTTCGTCACT CAGAAAAAAA AGCATTCTCG CCCTAACGCT TTATTTGTGT 
TTCTTTATCG CGACCATTGG CTCCGTCGTG TACCTCGTTG TTGACCCGCC AGTCCGAGAA
AAGCTCGAAC GTAATTTGAA TTTACGCACC CAATTACTCG CATCTCAAAT TGAGGGGCCA
TTGACCAGCT CCGTGGGGTT GCTGAACAGC TTGGTCGGGT TAGGGCAAAC ACCAACAGCC
GATATTTCAC TGCAAGGTAC CATTCCCCAG TTACTTGCTG TGAGTGATGA CATCATCGTC
AGTGGCGGTT TATGGCCAAA GCCGACACTC GAAGATGAGC GCTGGCAATA CACAAGTTTA
TTCTTCAATA AGAACGAGCA CGGCAGCTTA GATCAAATCC ATTCTTACAA TAACCCCGAG
TCCGGTGGTT ACGACAACGA GCCATGGTAT CAATCTGTGG CGAATAAGCC CGCTGGTTAT
GTAAGTTGGT CTGGCGTTTA TATTGACACC TTTACCCAAG TTCAGATGAT CACGGCTTCA
GCACCTTACT ACAAAGAGGG CGTTTTTGCT GGTGTCGCCA CGGTCGATTT ATCCCTCGAA
GCGCTATTCC AGTTCATTCG CGAGCACACC AACCAATACT CTTTAGGCGT GGTGATCCGT
GACGCGGATG GACAAGTCGT GATTGAGCAT AACTTTCATC TCACCAAAGA CATTTACATC
AGTCAGCTTG AATTCGGCGC TTTCCAATGG CAAATGGACG TTGTGAATGC CAAAGTTCAA
GTTGCAGAAC AAGTGTTTGA TCAAGTGATG AGTGTAGAGC GGGGCATCAT CCCTTTCTTA
CTGATCTGCG TGCTGGTGGG CTACTACCTA CTGAATCGCT ACATTGTGGA GCCTATTGTC
CGCATCGCGC AAAAAGTTGA TGACTCCAAA ACTGGTGGCA TTATCGACAT TACCTACGAT
AGTGAAGATG AAATCGGACA CCTGATCACC AAGTTCAATG AGAAAACCGT CTACCTAGAG
CAAGAGCGCA TCAAAGCGCA GGCATCCACC AATGCGAAAA CGGCATTTTT GGCGACGCTA
TCACATGAAA TTCGAACGCC GATGAATGGT GTGTTAGGAA CGGCGCAAAT TCTGCTGAAA
ACCCAGTTAA CCGACGAGCA GAGAAAACAC CTCAACACCC TGTATGACTC AGGCGATCAT
ATGATGACGT TGCTAAACGA AATCTTGGAT TACTCGAAGA TTGAGCAGGG GCACATCGAG
ATTGATAACA CCCCATTCCC AATTGATTCG ATTCTGGGCA GTACCAACAG TGTCTATCAC
ACCTTGTGTG CTGAGAAGGG CCTGCAATTC CGCGTGATTT CCAATGTGCC AGAGGGGCGT
TGGTACAACA ACGATAAAGC ACGACTGCGC CAAGTTTTGT TCAATCTACT CAATAATGCA
GTCAAGTTCA CCGACCGAGG CTATGTGGAG GTAGAGCTGA CAGAGTATGT CGAGGGACAG
CAAACGCGCT TGCGCATTAG CGTAAAAGAC ACGGGCATCG GCATTAGTCC TGACGCTCAG
GAACGCATCT TTAGGCCGTT TGAGCAGGCA GAGTCTTCGA CCACGCGTCG ATATGGCGGT
ACAGGCCTTG GACTCGCGAT TGTTAAGCAG ATTTCCGAGC ACATGGGCGG TAGCATTACC
GTGCAGAGCC AAGAATGCAT CGGCACTAAG TTTGTGGTCG AACTTGAGCT AAACCCCTGT
GAAGCGGGGA TATTAGAGCC TACCAGCACA CACAAACTTG ATTGCCAGGG CTTACGTGCA
TTGATCGTTG AAGATAACCG CACCAACACC ATCATCATGG AGACCTTCTT ACGCTCGAAG
GGTTTCGCTT GTGTTTGTGT CGAGAATGGC AAACAAGCCG TAGAGCAGGT GTCCAGTCAG
AAGTTTGATT TAGTATTAAT GGACAACCAC ATGCCGGTGC TCGATGGGGT AGGCGCAATC
GCGGTGATTC GCTCTATGGA TACACCCGCA AAATCTGTGT TGATCTTCGG GTGTACGGCC
GATGTATTCA AAGAGACACA AGAGAGAATG CTGGATGTAG GCGCTAACCA CATTATTGCA
AAACCTATTG TTGAATCAGA ATTGGATGAT GCTTTGTATC GCCACGCTTC TATCCTCTAT
CAATACCAAG ATAAGCAGGG GAATAGACCA GTAACACCGC ACGATGTAGA TGCGTTACTT
TTGAACTTCT ATCTAGCGTT AGATGATGGC AACCTCACTC AAGCGTTAAC GACGCTGTCT
TATATTCTCG ATAGCGTGCA ACCGAGCATG ACAGAAGAGC TAAGCAGTGT TATTGCACGT
ATTGAAAGCC ACTTACTCAA AGCCTTATCT CCTGAGCAAG AAGACATCGA TCAGCTCACC
ATATTATTGG CAGATCAATA A
 
Protein sequence
MEIRSSLRKK SILALTLYLC FFIATIGSVV YLVVDPPVRE KLERNLNLRT QLLASQIEGP 
LTSSVGLLNS LVGLGQTPTA DISLQGTIPQ LLAVSDDIIV SGGLWPKPTL EDERWQYTSL
FFNKNEHGSL DQIHSYNNPE SGGYDNEPWY QSVANKPAGY VSWSGVYIDT FTQVQMITAS
APYYKEGVFA GVATVDLSLE ALFQFIREHT NQYSLGVVIR DADGQVVIEH NFHLTKDIYI
SQLEFGAFQW QMDVVNAKVQ VAEQVFDQVM SVERGIIPFL LICVLVGYYL LNRYIVEPIV
RIAQKVDDSK TGGIIDITYD SEDEIGHLIT KFNEKTVYLE QERIKAQAST NAKTAFLATL
SHEIRTPMNG VLGTAQILLK TQLTDEQRKH LNTLYDSGDH MMTLLNEILD YSKIEQGHIE
IDNTPFPIDS ILGSTNSVYH TLCAEKGLQF RVISNVPEGR WYNNDKARLR QVLFNLLNNA
VKFTDRGYVE VELTEYVEGQ QTRLRISVKD TGIGISPDAQ ERIFRPFEQA ESSTTRRYGG
TGLGLAIVKQ ISEHMGGSIT VQSQECIGTK FVVELELNPC EAGILEPTST HKLDCQGLRA
LIVEDNRTNT IIMETFLRSK GFACVCVENG KQAVEQVSSQ KFDLVLMDNH MPVLDGVGAI
AVIRSMDTPA KSVLIFGCTA DVFKETQERM LDVGANHIIA KPIVESELDD ALYRHASILY
QYQDKQGNRP VTPHDVDALL LNFYLALDDG NLTQALTTLS YILDSVQPSM TEELSSVIAR
IESHLLKALS PEQEDIDQLT ILLADQ