Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VIBHAR_01620 |
Symbol | |
ID | 5552941 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio harveyi ATCC BAA-1116 |
Kingdom | Bacteria |
Replicon accession | NC_009783 |
Strand | + |
Start bp | 1628443 |
End bp | 1630863 |
Gene Length | 2421 bp |
Protein Length | 806 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640907111 |
Product | Signal transduction histidine kinase |
Protein accession | YP_001444817 |
Protein GI | 156973910 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase [COG0784] FOG: CheY-like receiver |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTC GTTCGTCACT CAGAAAAAAA AGCATTCTCG CCCTAACGCT TTATTTGTGT TTCTTTATCG CGACCATTGG CTCCGTCGTG TACCTCGTTG TTGACCCGCC AGTCCGAGAA AAGCTCGAAC GTAATTTGAA TTTACGCACC CAATTACTCG CATCTCAAAT TGAGGGGCCA TTGACCAGCT CCGTGGGGTT GCTGAACAGC TTGGTCGGGT TAGGGCAAAC ACCAACAGCC GATATTTCAC TGCAAGGTAC CATTCCCCAG TTACTTGCTG TGAGTGATGA CATCATCGTC AGTGGCGGTT TATGGCCAAA GCCGACACTC GAAGATGAGC GCTGGCAATA CACAAGTTTA TTCTTCAATA AGAACGAGCA CGGCAGCTTA GATCAAATCC ATTCTTACAA TAACCCCGAG TCCGGTGGTT ACGACAACGA GCCATGGTAT CAATCTGTGG CGAATAAGCC CGCTGGTTAT GTAAGTTGGT CTGGCGTTTA TATTGACACC TTTACCCAAG TTCAGATGAT CACGGCTTCA GCACCTTACT ACAAAGAGGG CGTTTTTGCT GGTGTCGCCA CGGTCGATTT ATCCCTCGAA GCGCTATTCC AGTTCATTCG CGAGCACACC AACCAATACT CTTTAGGCGT GGTGATCCGT GACGCGGATG GACAAGTCGT GATTGAGCAT AACTTTCATC TCACCAAAGA CATTTACATC AGTCAGCTTG AATTCGGCGC TTTCCAATGG CAAATGGACG TTGTGAATGC CAAAGTTCAA GTTGCAGAAC AAGTGTTTGA TCAAGTGATG AGTGTAGAGC GGGGCATCAT CCCTTTCTTA CTGATCTGCG TGCTGGTGGG CTACTACCTA CTGAATCGCT ACATTGTGGA GCCTATTGTC CGCATCGCGC AAAAAGTTGA TGACTCCAAA ACTGGTGGCA TTATCGACAT TACCTACGAT AGTGAAGATG AAATCGGACA CCTGATCACC AAGTTCAATG AGAAAACCGT CTACCTAGAG CAAGAGCGCA TCAAAGCGCA GGCATCCACC AATGCGAAAA CGGCATTTTT GGCGACGCTA TCACATGAAA TTCGAACGCC GATGAATGGT GTGTTAGGAA CGGCGCAAAT TCTGCTGAAA ACCCAGTTAA CCGACGAGCA GAGAAAACAC CTCAACACCC TGTATGACTC AGGCGATCAT ATGATGACGT TGCTAAACGA AATCTTGGAT TACTCGAAGA TTGAGCAGGG GCACATCGAG ATTGATAACA CCCCATTCCC AATTGATTCG ATTCTGGGCA GTACCAACAG TGTCTATCAC ACCTTGTGTG CTGAGAAGGG CCTGCAATTC CGCGTGATTT CCAATGTGCC AGAGGGGCGT TGGTACAACA ACGATAAAGC ACGACTGCGC CAAGTTTTGT TCAATCTACT CAATAATGCA GTCAAGTTCA CCGACCGAGG CTATGTGGAG GTAGAGCTGA CAGAGTATGT CGAGGGACAG CAAACGCGCT TGCGCATTAG CGTAAAAGAC ACGGGCATCG GCATTAGTCC TGACGCTCAG GAACGCATCT TTAGGCCGTT TGAGCAGGCA GAGTCTTCGA CCACGCGTCG ATATGGCGGT ACAGGCCTTG GACTCGCGAT TGTTAAGCAG ATTTCCGAGC ACATGGGCGG TAGCATTACC GTGCAGAGCC AAGAATGCAT CGGCACTAAG TTTGTGGTCG AACTTGAGCT AAACCCCTGT GAAGCGGGGA TATTAGAGCC TACCAGCACA CACAAACTTG ATTGCCAGGG CTTACGTGCA TTGATCGTTG AAGATAACCG CACCAACACC ATCATCATGG AGACCTTCTT ACGCTCGAAG GGTTTCGCTT GTGTTTGTGT CGAGAATGGC AAACAAGCCG TAGAGCAGGT GTCCAGTCAG AAGTTTGATT TAGTATTAAT GGACAACCAC ATGCCGGTGC TCGATGGGGT AGGCGCAATC GCGGTGATTC GCTCTATGGA TACACCCGCA AAATCTGTGT TGATCTTCGG GTGTACGGCC GATGTATTCA AAGAGACACA AGAGAGAATG CTGGATGTAG GCGCTAACCA CATTATTGCA AAACCTATTG TTGAATCAGA ATTGGATGAT GCTTTGTATC GCCACGCTTC TATCCTCTAT CAATACCAAG ATAAGCAGGG GAATAGACCA GTAACACCGC ACGATGTAGA TGCGTTACTT TTGAACTTCT ATCTAGCGTT AGATGATGGC AACCTCACTC AAGCGTTAAC GACGCTGTCT TATATTCTCG ATAGCGTGCA ACCGAGCATG ACAGAAGAGC TAAGCAGTGT TATTGCACGT ATTGAAAGCC ACTTACTCAA AGCCTTATCT CCTGAGCAAG AAGACATCGA TCAGCTCACC ATATTATTGG CAGATCAATA A
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Protein sequence | MEIRSSLRKK SILALTLYLC FFIATIGSVV YLVVDPPVRE KLERNLNLRT QLLASQIEGP LTSSVGLLNS LVGLGQTPTA DISLQGTIPQ LLAVSDDIIV SGGLWPKPTL EDERWQYTSL FFNKNEHGSL DQIHSYNNPE SGGYDNEPWY QSVANKPAGY VSWSGVYIDT FTQVQMITAS APYYKEGVFA GVATVDLSLE ALFQFIREHT NQYSLGVVIR DADGQVVIEH NFHLTKDIYI SQLEFGAFQW QMDVVNAKVQ VAEQVFDQVM SVERGIIPFL LICVLVGYYL LNRYIVEPIV RIAQKVDDSK TGGIIDITYD SEDEIGHLIT KFNEKTVYLE QERIKAQAST NAKTAFLATL SHEIRTPMNG VLGTAQILLK TQLTDEQRKH LNTLYDSGDH MMTLLNEILD YSKIEQGHIE IDNTPFPIDS ILGSTNSVYH TLCAEKGLQF RVISNVPEGR WYNNDKARLR QVLFNLLNNA VKFTDRGYVE VELTEYVEGQ QTRLRISVKD TGIGISPDAQ ERIFRPFEQA ESSTTRRYGG TGLGLAIVKQ ISEHMGGSIT VQSQECIGTK FVVELELNPC EAGILEPTST HKLDCQGLRA LIVEDNRTNT IIMETFLRSK GFACVCVENG KQAVEQVSSQ KFDLVLMDNH MPVLDGVGAI AVIRSMDTPA KSVLIFGCTA DVFKETQERM LDVGANHIIA KPIVESELDD ALYRHASILY QYQDKQGNRP VTPHDVDALL LNFYLALDDG NLTQALTTLS YILDSVQPSM TEELSSVIAR IESHLLKALS PEQEDIDQLT ILLADQ
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