Gene Rcas_4207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_4207 
Symbol 
ID5541718 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp5442041 
End bp5442403 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content54% 
IMG OID640896314 
Productresponse regulator receiver protein 
Protein accessionYP_001434252 
Protein GI156744123 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.771701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.140814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA AAATTTTGGT GGTCGACGAC AGTAAACTGG TAACCGATAT TGTCAAGATG 
CGACTTGGCA TGTACGGCTA TGAGGTGCGC CTGGCGCACA GCGGCGAAGA GGCGCTCAAA
GCCATAGAAG AAGAGGTGCC CGACCTGCTG GTGCTCGATG TGCATATGCC GGGAATCGAC
GGGTATGAAG TCTGTCGCCG GCTACGCGAT AACCCGGCGC TTGATGCCTT GCGTATCATT
ATGCTCACTT CAAGCGACGA CAAGCATGCG GCATTCGAGG CGGGAGTCGA TGACTACCTG
AACAAAGATG TCGACCTGCT CAACCTTCCC AACCGGGTCA AGATGATCCT GGAGATGGAT
TAG
 
Protein sequence
MAEKILVVDD SKLVTDIVKM RLGMYGYEVR LAHSGEEALK AIEEEVPDLL VLDVHMPGID 
GYEVCRRLRD NPALDALRII MLTSSDDKHA AFEAGVDDYL NKDVDLLNLP NRVKMILEMD