| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | M446_6679 |
|---|
| Symbol | |
|---|
| ID | 6129360 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium sp. 4-46 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010511 |
|---|
| Strand | - |
|---|
| Start bp | 7352894 |
|---|
| End bp | 7354267 |
|---|
| Gene Length | 1374 bp |
|---|
| Protein Length | 457 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641646765 |
|---|
| Product | response regulator receiver modulated diguanylate cyclase |
|---|
| Protein accession | YP_001773364 |
|---|
| Protein GI | 170744709 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCAC GCGTGCTCAT CGTCGACGAC CTCTTCCCGA ACCTCAAGCT CCTCGAGACC
AAGCTGTCGC TGGAGTATTT CGACGTGATC TCGGCCATGA ACGGGCCGGA CGCGATCGCG
ATCTGCGAGC AGGGCCTGTG CGACATCGTC CTCCTCGACG TGATGATGCC GGGCATGGAC
GGGTTCGAGG TGTGCCGGCG GCTGAAGACG ACGCCGACCA CGGCGCATCT GCCGGTGGTG
ATGGTGACCG CCCTCGACCA GCCGAGCGAC CGCCTGCGCG GCCTCGACGC CGGGGCCGAC
GATTTCCTGA CCAAGCCGAT CGACGACACG GCCCTGCTCG CGCGGGTGCG CAGCCTCGTG
CGGCTGAAGG CGATGACCGA CGAGCTGCGC AACCGCGCAC TCGCCTCGCG GGACCTCGGC
TTCGCGGACC CGCTCGCGGC GGCGGCCGCC GAGACCGGGC TCAACGCCCA CCTGCTGATC
GCCGATGACC GCCGCGCCTC GGCCGAGCGC ATGGCCGCGG CGCTGAGCCA GTCCCATTGC
GTCGAGGTGG TGGCCGATCC GCACCGGGCG CTGGAGACCG CGACCGAGGG CAATTTCGAC
GTGGCGCTGG TCAGCCTCGA CTTCGACGGG TTCGACGGGC TGCGCCTGTG CAGCCAGCTG
CGCTCCCTCG ACCGGACGCG CGGCATGCAG GTGGTGATGC TCGCCGACGC GGGCGACCGC
GCCCGGATCA TGCGCGGGCT CGACCTCGGC GTGCACGACT ACCTGGTGCG CCCGATCGAC
CGCAACGAGC TCGTCGCCCG GGTGCGCACC CAGGTGCGGC GCCGGCGCTT CGCGCATTCC
CTGCGCGAAT CCGTCCAGGC CTCGATGGAG CTCGCCGTCA CGGACGGGCT CACCGGCCTG
CACAATCGCC GCTACTTCGA CAGCCACCTC GCCGGGCTGT TCCGCGAGAC CTCCCTGCGC
GGGCGGCCGC TCGCCCTGCT CCTCCTCGAC ATCGACCGCT TCAAGGCGAT CAACGACAGT
TTCGGCCACG ACGCGGGCGA CGAGGTGCTG CGCCAGTTCG CCGACCGGAT CCGCGCCCAT
ACCCGGGGCA TCGACATCGT CGCCCGCTTC GGCGGCGAGG AGATCGTCGT CGTGGTCCCG
GATACCGGGC TCGACGGCGC CGGCCAGGTC GCCGAGCGCA TCCGCGAACG GATCGAGGCG
ACGCCCTTCC TGGTGCACGG GGGCACGCGG GGAATCGACG TCACGGTCTC GATCGGCCTG
GCGGTGCGCC ACCCGGACGA CGCACTCCCC GCCGACCTCC TCAAGCGCGC CGACGTGGCG
CTCTACCGGG CCAAGCAGGA GGGGCGCAAC CGGGTCGTCG CGGCCGCGGC CTGA
|
|---|
| Protein sequence | MSARVLIVDD LFPNLKLLET KLSLEYFDVI SAMNGPDAIA ICEQGLCDIV LLDVMMPGMD
GFEVCRRLKT TPTTAHLPVV MVTALDQPSD RLRGLDAGAD DFLTKPIDDT ALLARVRSLV
RLKAMTDELR NRALASRDLG FADPLAAAAA ETGLNAHLLI ADDRRASAER MAAALSQSHC
VEVVADPHRA LETATEGNFD VALVSLDFDG FDGLRLCSQL RSLDRTRGMQ VVMLADAGDR
ARIMRGLDLG VHDYLVRPID RNELVARVRT QVRRRRFAHS LRESVQASME LAVTDGLTGL
HNRRYFDSHL AGLFRETSLR GRPLALLLLD IDRFKAINDS FGHDAGDEVL RQFADRIRAH
TRGIDIVARF GGEEIVVVVP DTGLDGAGQV AERIRERIEA TPFLVHGGTR GIDVTVSIGL
AVRHPDDALP ADLLKRADVA LYRAKQEGRN RVVAAAA
|
|---|
| |