| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_2694 |
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| Symbol | |
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| ID | 5209663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 3348208 |
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| End bp | 3351117 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640596296 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001277018 |
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| Protein GI | 148656813 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0176534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAC TGGCACACAT CCTCGTGGTC GATGACGACG CCAGTGTGCG TCGTATGCTT
CAGATTCTCC TGTCCAATGC CGGGTATCGC GTGTCGCTCG CCACCACCGG CGAAGAGGCG
CTGGCGTACC TGGAACTCGT CACCCCTGAT CTGGTGTTGC TGGATGTGGC ATTGCCGGGG
GTCAGCGGTC GTCAGGTGAT GGAGCGCATT AAGTCCGACC CGGATCGTCC GTTTATTCCG
GTCATCCTGG TCACCGGGCA TAGCGATCCA GAGGCAAAAG TTGCGGCGCT CGATGCCGGC
GCCGACGATT TCCTGGTCAA ACCGGTCGAT CTGGCTGAAC TCCTTGCGCG GGTGCGCGCA
ATGCTGCGGT TGCAACGCAG TCAGCGCTCG CTGCGCGCCG AGCAGCGGAA AACCGAATTG
TTGTTGCACC TGACGCGCGA ACTGGGAACG ACGCTTGATC TTGATCGGTT GCTCACCCAG
TTTCTCAACC GGCTCGCCGA TGCCGTCGGT GCGGTGCGCG CCAGCATTCT GGTGCTTGCC
AGCGACCAAC CGCGCCTTTT CTCCAGCACG CGCAACCGCC CAACCATTCC ATTGACCGAC
ATTCTCGGTC AGGGTGTGGC CGGGTGGGTG CTGCGCGAGC GACAACCGTT GATTATCAAT
GATACCCGTG ACGATCCGCG CTGGATCGCG GTGAATGCCC AGCAGCGCGC AGTGCGAAGC
GTCGCCGCTG TGCCGCTGGT GCGCGAAGGG CGCGCCCTTG CCGCGATTAC GCTGGTGCAC
CATACTCCCG GCTATTTTGG TGAGGAGCAT CTGGAATTGC TGAATGCTGT GGCAGCACAG
AGCGCAATTG CGCTCGAAAA TGCGGAACTG TTCCGACTGA CCCGCATCCA GCGTGATCTG
CTCGAGCGCC GCGCCGAGGA ACTCCAACGC ATCAATCAGA TCAGTCGCTA CCTGACCGAG
TTGATGAGTC CGGATCAACT GCTCCGCCTG GTGGCGCACC TGATCCATCA TACGTTTGGC
TATCCGCTGG TCGCTGTCGT GCTCCAGGAG GAGGACCGTC TGGTGCTGCG CGCCGCCGCA
GGCAACCGCG CCATCGAACA GGCAATCGGG CAGGTGACGC TCTCGGAAGT CAGCGCTGCC
GGACAGGCGA TTCTGCGCCG CGAACCGTAT CTTATCGCCG ATACGCTTCA GACGGAACTC
GCAATGTCGG CGGCTCTTGA TCGCAGCGTG CGCTCGGATC TGGCAGTGCC GATCCAGACG
GCGCGCCAGG TCTTTGGCGC TCTGGCGGTC ATGTCGCCTG TGCCTGAAGC GTTCGGCGAC
GCCGATATCC GGCTTCTTTC GACACTGGCA AGCCAGCTGG GCATTGCGCT GGATAACGCA
CGCCTGTTCG ATATGGAGCA GCGGCGCGTG CGTCAACTCG GCATGGTGAA CAACCTGTCG
CTGGCAATGA CGGCGCGCCT GGATGCAGCG GAAAATCTGA CCATCGCCGC GCGCGCGATT
GCTGCAATCT TCGACGTTGT CGGATGTGGC ATCGTCCTCA CCGATCCGGG CGCCCATGCC
ATGGATAGTG CGGTGCATGC CACCGATAGC ATCAGGAATC GTCTCCCCTG GCGCGCGCTT
GCCGAAACGA TCTCGCTTCC CGCTCCCCGT GTGCTTCCGG TGAGCGATGA GCGCCTGGCT
GGATGCGCAA CCGAACTTGT GGCGGCTGGC GTTACGACGC TGGCAATCGC GCCGCTGCTG
ACAGGAAGCC GGCAGATCGG GCTGATTGTG CTCGATGTCA GCGGTTATGA ACGGCAGTTC
CAGGCGACCG ATCTCACGCT GCTCGAGACG GTTGCAAGTT TGCTGGCGCA GGTGATAGAA
AACGCTCGTC TGTATCACGA GGTGGAAGAC GAACGCTCGA CGCTGGGCGC CGTGCTGCGC
AGCGCTGCCG ATCCGATTCT GTTGATCGAT CCGCACAACC GGTTGCTGCT GGCGAACCCG
GCAGCGGAGC AACGCCTCCA CCTGACAGCC ACGTCTGGGA GCTCGCTCGA TCAGTTAGTC
GAGAATCGCG ATCTGCTCCG TGCGTTGAAC GGCGCTTCCG ACAATGGTCA ACCGATGGTG
GAAGTCGCTC TGCCCGATGG CGCGATCTTC AATGTCAGCG TCGCGCCGGT GCGCGGCGCC
GATAATGCGT TGATCGGGCG CGTGGCAGTC ATGCAGGATA TTACTGCGAT CAAAGAACTT
GAGCGTGCTG AACAGGAGCG CCTGCGCGCG ACGTTTCGAC GCTATGTGTC GCCCCAGGTG
GTCGAAGAGG TCCTGGCGGG CGGCGGAGAG TTCGGCGCAC CGCAGGAGTG CGATATTGTG
GTGCTGTTTG CCGATATACG CGGCTATACC ACGCTCGCCG AAGGTCTGGC GCCGCATATC
CTCGTCGAGG AGATCCTCAA TCGCTACTTT ACCGCAATGA CCGAGGCGCT CTACCGTCAC
GGCGGCACGG TCGACAAGTT TCTGGGCGAC GGGTTGATCG GGGTGTTCGG GGTGCCTATC
GCCCGTGATG ACGATGTGCC CCGTTCGTTG CGCGCAGCGG TCGATCTTCA ACTGGCGTTC
CACGATCTGC GCAACATCTG GCGTCGCACC CTTGGTCTCG ATCTGGGGAT GGGCGTGGGG
GTCGCTTACG GGTCGGCGCT CGTCGGGACG ATTGGATCAC CGCAACGCCT CGACTACACC
GTGATCGGAG ATGTTGTCAA TACGGCGAAT CGCCTGAGTG GACTGGCGCG CGCCGATCAG
ATTATTGTGT CCCATCGTCT GATCGATGCA CTGCCGCCGG ATTGTGACCT GCCGTGGCAG
TTGCGTCCAA TCGGTCATGT CCAGCTCAAG GGGAAGCAGG AAGCGCACCT GGCGTATGAA
ATCGTGTATG AAGTGCAATG CCACGTCTGA
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| Protein sequence | MTELAHILVV DDDASVRRML QILLSNAGYR VSLATTGEEA LAYLELVTPD LVLLDVALPG
VSGRQVMERI KSDPDRPFIP VILVTGHSDP EAKVAALDAG ADDFLVKPVD LAELLARVRA
MLRLQRSQRS LRAEQRKTEL LLHLTRELGT TLDLDRLLTQ FLNRLADAVG AVRASILVLA
SDQPRLFSST RNRPTIPLTD ILGQGVAGWV LRERQPLIIN DTRDDPRWIA VNAQQRAVRS
VAAVPLVREG RALAAITLVH HTPGYFGEEH LELLNAVAAQ SAIALENAEL FRLTRIQRDL
LERRAEELQR INQISRYLTE LMSPDQLLRL VAHLIHHTFG YPLVAVVLQE EDRLVLRAAA
GNRAIEQAIG QVTLSEVSAA GQAILRREPY LIADTLQTEL AMSAALDRSV RSDLAVPIQT
ARQVFGALAV MSPVPEAFGD ADIRLLSTLA SQLGIALDNA RLFDMEQRRV RQLGMVNNLS
LAMTARLDAA ENLTIAARAI AAIFDVVGCG IVLTDPGAHA MDSAVHATDS IRNRLPWRAL
AETISLPAPR VLPVSDERLA GCATELVAAG VTTLAIAPLL TGSRQIGLIV LDVSGYERQF
QATDLTLLET VASLLAQVIE NARLYHEVED ERSTLGAVLR SAADPILLID PHNRLLLANP
AAEQRLHLTA TSGSSLDQLV ENRDLLRALN GASDNGQPMV EVALPDGAIF NVSVAPVRGA
DNALIGRVAV MQDITAIKEL ERAEQERLRA TFRRYVSPQV VEEVLAGGGE FGAPQECDIV
VLFADIRGYT TLAEGLAPHI LVEEILNRYF TAMTEALYRH GGTVDKFLGD GLIGVFGVPI
ARDDDVPRSL RAAVDLQLAF HDLRNIWRRT LGLDLGMGVG VAYGSALVGT IGSPQRLDYT
VIGDVVNTAN RLSGLARADQ IIVSHRLIDA LPPDCDLPWQ LRPIGHVQLK GKQEAHLAYE
IVYEVQCHV
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