More than 300 homologs were found in PanDaTox collection
for query gene Rfer_2029 on replicon NC_007908
Organism: Rhodoferax ferrireducens T118



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007908  Rfer_2029  methyl-accepting chemotaxis sensory transducer  100 
 
 
529 aa  1033    Rhodoferax ferrireducens T118  Bacteria  normal  0.174718  n/a   
 
 
-
 
NC_011992  Dtpsy_2970  methyl-accepting chemotaxis sensory transducer  46.17 
 
 
541 aa  400  9.999999999999999e-111  Acidovorax ebreus TPSY  Bacteria  normal  0.704891  n/a   
 
 
-
 
NC_008782  Ajs_3660  methyl-accepting chemotaxis sensory transducer  46.17 
 
 
541 aa  397  1e-109  Acidovorax sp. JS42  Bacteria  normal  0.512726  normal 
 
 
-
 
NC_008752  Aave_0830  methyl-accepting chemotaxis sensory transducer  47.88 
 
 
524 aa  392  1e-108  Acidovorax citrulli AAC00-1  Bacteria  normal  0.419137  normal  0.285122 
 
 
-
 
NC_007908  Rfer_2225  methyl-accepting chemotaxis sensory transducer  40.08 
 
 
583 aa  325  1e-87  Rhodoferax ferrireducens T118  Bacteria  normal  0.220406  n/a   
 
 
-
 
NC_007974  Rmet_5612  methyl-accepting chemotaxis protein II  41.2 
 
 
513 aa  325  1e-87  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B3731  methyl-accepting chemotaxis sensory transducer  41.4 
 
 
513 aa  323  7e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1752  methyl-accepting chemotaxis sensory transducer  40.43 
 
 
523 aa  318  1e-85  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1951  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
508 aa  318  2e-85  Acidovorax sp. JS42  Bacteria  normal  normal  0.747742 
 
 
-
 
NC_008782  Ajs_0160  methyl-accepting chemotaxis sensory transducer  41.63 
 
 
579 aa  308  1.0000000000000001e-82  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0178  methyl-accepting chemotaxis sensory transducer  41.39 
 
 
581 aa  306  5.0000000000000004e-82  Acidovorax ebreus TPSY  Bacteria  normal  0.62004  n/a   
 
 
-
 
NC_007908  Rfer_0925  methyl-accepting chemotaxis sensory transducer  37.4 
 
 
552 aa  298  1e-79  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A0586  methyl-accepting chemotaxis sensory transducer  42.83 
 
 
584 aa  298  1e-79  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_4189  methyl-accepting chemotaxis sensory transducer  38.89 
 
 
559 aa  298  2e-79  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_012791  Vapar_4186  methyl-accepting chemotaxis sensory transducer  40.04 
 
 
577 aa  296  8e-79  Variovorax paradoxus S110  Bacteria  normal  0.494266  n/a   
 
 
-
 
NC_007947  Mfla_2154  methyl-accepting chemotaxis sensory transducer  39.24 
 
 
569 aa  295  1e-78  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3464  methyl-accepting chemotaxis sensory transducer  39.92 
 
 
551 aa  291  2e-77  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0407  methyl-accepting chemotaxis sensory transducer  40.77 
 
 
525 aa  288  2e-76  Acidovorax citrulli AAC00-1  Bacteria  normal  0.770374  normal 
 
 
-
 
NC_007404  Tbd_1620  methyl-accepting chemotaxis sensory transducer  40.37 
 
 
559 aa  286  5.999999999999999e-76  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.439493  normal  0.532508 
 
 
-
 
NC_010002  Daci_3834  methyl-accepting chemotaxis sensory transducer  38.95 
 
 
595 aa  285  2.0000000000000002e-75  Delftia acidovorans SPH-1  Bacteria  normal  0.10184  normal  0.0113192 
 
 
-
 
NC_010625  Bphy_6319  methyl-accepting chemotaxis sensory transducer  48.62 
 
 
549 aa  279  1e-73  Burkholderia phymatum STM815  Bacteria  normal  0.249944  normal 
 
 
-
 
NC_013421  Pecwa_3618  methyl-accepting chemotaxis sensory transducer  39.32 
 
 
551 aa  278  2e-73  Pectobacterium wasabiae WPP163  Bacteria  normal  0.453306  n/a   
 
 
-
 
NC_008782  Ajs_0364  methyl-accepting chemotaxis sensory transducer  39.38 
 
 
580 aa  278  2e-73  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_0354  methyl-accepting chemotaxis sensory transducer  39.53 
 
 
578 aa  277  3e-73  Acidovorax ebreus TPSY  Bacteria  normal  0.496762  n/a   
 
 
-
 
NC_003296  RS04782  methyl-accepting chemotaxis transducer transmembrane protein  45.61 
 
 
543 aa  276  5e-73  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0104  methyl-accepting chemotaxis sensory transducer  54.05 
 
 
622 aa  275  1.0000000000000001e-72  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0990  methyl-accepting chemotaxis sensory transducer  37.7 
 
 
542 aa  271  2e-71  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0931  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
591 aa  269  8e-71  Acidovorax ebreus TPSY  Bacteria  normal  0.269909  n/a   
 
 
-
 
NC_008752  Aave_1343  methyl-accepting chemotaxis sensory transducer  39.16 
 
 
620 aa  269  8.999999999999999e-71  Acidovorax citrulli AAC00-1  Bacteria  normal  0.244601  normal  0.213177 
 
 
-
 
NC_008782  Ajs_1017  methyl-accepting chemotaxis sensory transducer  41.58 
 
 
591 aa  269  8.999999999999999e-71  Acidovorax sp. JS42  Bacteria  normal  0.696887  normal 
 
 
-
 
NC_008825  Mpe_A2663  methyl-accepting chemotaxis sensory transducer  53.62 
 
 
520 aa  268  1e-70  Methylibium petroleiphilum PM1  Bacteria  normal  0.0198398  normal 
 
 
-
 
NC_007908  Rfer_2507  methyl-accepting chemotaxis sensory transducer  45.74 
 
 
589 aa  268  2e-70  Rhodoferax ferrireducens T118  Bacteria  normal  0.197123  n/a   
 
 
-
 
NC_007908  Rfer_2354  methyl-accepting chemotaxis sensory transducer  46.46 
 
 
554 aa  268  2.9999999999999995e-70  Rhodoferax ferrireducens T118  Bacteria  normal  0.547249  n/a   
 
 
-
 
NC_012912  Dd1591_0695  methyl-accepting chemotaxis sensory transducer  39.54 
 
 
561 aa  266  5.999999999999999e-70  Dickeya zeae Ech1591  Bacteria  normal  0.305861  n/a   
 
 
-
 
NC_011992  Dtpsy_2969  methyl-accepting chemotaxis sensory transducer  49.53 
 
 
550 aa  265  1e-69  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_1344  methyl-accepting chemotaxis sensory transducer  43.08 
 
 
536 aa  264  3e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  0.129873  normal  0.199885 
 
 
-
 
NC_008752  Aave_1405  methyl-accepting chemotaxis sensory transducer  47.15 
 
 
548 aa  264  3e-69  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_3659  methyl-accepting chemotaxis sensory transducer  49.22 
 
 
550 aa  264  3e-69  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_1480  methyl-accepting chemotaxis sensory transducer  40.33 
 
 
537 aa  263  4.999999999999999e-69  Rhodoferax ferrireducens T118  Bacteria  normal  0.201713  n/a   
 
 
-
 
NC_010002  Daci_5082  methyl-accepting chemotaxis sensory transducer  42.36 
 
 
589 aa  261  2e-68  Delftia acidovorans SPH-1  Bacteria  normal  0.678642  normal  0.0204532 
 
 
-
 
NC_008825  Mpe_A0750  methyl-accepting chemotaxis sensory transducer  50.32 
 
 
592 aa  261  2e-68  Methylibium petroleiphilum PM1  Bacteria  normal  0.318431  normal  0.0335504 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  50.65 
 
 
554 aa  260  5.0000000000000005e-68  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_012912  Dd1591_0055  methyl-accepting chemotaxis sensory transducer  44.95 
 
 
628 aa  259  7e-68  Dickeya zeae Ech1591  Bacteria  normal  0.608397  n/a   
 
 
-
 
NC_008752  Aave_0831  methyl-accepting chemotaxis sensory transducer  48.54 
 
 
561 aa  259  7e-68  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236088  normal  0.180731 
 
 
-
 
NC_012791  Vapar_4183  methyl-accepting chemotaxis sensory transducer  37.39 
 
 
516 aa  259  8e-68  Variovorax paradoxus S110  Bacteria  normal  0.278563  n/a   
 
 
-
 
NC_010524  Lcho_1600  methyl-accepting chemotaxis sensory transducer  46.63 
 
 
594 aa  259  1e-67  Leptothrix cholodnii SP-6  Bacteria  n/a    decreased coverage  0.00034667 
 
 
-
 
NC_008752  Aave_0227  methyl-accepting chemotaxis sensory transducer  40.76 
 
 
592 aa  259  1e-67  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1879  methyl-accepting chemotaxis sensory transducer  46.18 
 
 
661 aa  259  1e-67  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6240  chemotaxis sensory transducer  49.7 
 
 
556 aa  258  2e-67  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1820  methyl-accepting chemotaxis sensory transducer  34.81 
 
 
553 aa  258  2e-67  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1622  methyl-accepting chemotaxis sensory transducer  50.64 
 
 
572 aa  257  3e-67  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.415216  normal 
 
 
-
 
NC_013421  Pecwa_4354  methyl-accepting chemotaxis sensory transducer  39.64 
 
 
555 aa  257  3e-67  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_1417  methyl-accepting chemotaxis sensory transducer  35.21 
 
 
554 aa  256  5e-67  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.37293  n/a   
 
 
-
 
NC_010524  Lcho_3485  methyl-accepting chemotaxis sensory transducer  44.81 
 
 
573 aa  255  1.0000000000000001e-66  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.000328178 
 
 
-
 
NC_009436  Ent638_1858  methyl-accepting chemotaxis sensory transducer  44.01 
 
 
552 aa  255  1.0000000000000001e-66  Enterobacter sp. 638  Bacteria  normal  normal  0.332391 
 
 
-
 
NC_012880  Dd703_3862  methyl-accepting chemotaxis sensory transducer  35.73 
 
 
555 aa  255  1.0000000000000001e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1697  methyl-accepting chemotaxis protein  52.26 
 
 
541 aa  254  2.0000000000000002e-66  Methylibium petroleiphilum PM1  Bacteria  normal  0.796497  normal  0.294844 
 
 
-
 
NC_013421  Pecwa_4355  methyl-accepting chemotaxis sensory transducer  48.39 
 
 
540 aa  254  2.0000000000000002e-66  Pectobacterium wasabiae WPP163  Bacteria  normal  0.31766  n/a   
 
 
-
 
NC_012880  Dd703_0727  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
559 aa  255  2.0000000000000002e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1806  methyl-accepting chemotaxis sensory transducer  43.77 
 
 
652 aa  254  2.0000000000000002e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4072  methyl-accepting chemotaxis sensory transducer  44.54 
 
 
540 aa  254  2.0000000000000002e-66  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_0071  methyl-accepting chemotaxis sensory transducer  45.57 
 
 
630 aa  255  2.0000000000000002e-66  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_1600  methyl-accepting chemotaxis sensory transducer  50.63 
 
 
535 aa  254  2.0000000000000002e-66  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008782  Ajs_4062  methyl-accepting chemotaxis sensory transducer  51.32 
 
 
653 aa  254  2.0000000000000002e-66  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3407  methyl-accepting chemotaxis sensory transducer  51.32 
 
 
653 aa  254  3e-66  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_012880  Dd703_1816  methyl-accepting chemotaxis sensory transducer  45.54 
 
 
651 aa  254  3e-66  Dickeya dadantii Ech703  Bacteria  normal  0.700193  n/a   
 
 
-
 
NC_010002  Daci_5410  methyl-accepting chemotaxis sensory transducer  40.35 
 
 
635 aa  254  3e-66  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_0036  methyl-accepting chemotaxis sensory transducer  45.82 
 
 
567 aa  254  3e-66  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0428  methyl-accepting chemotaxis sensory transducer  51.13 
 
 
597 aa  254  4.0000000000000004e-66  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1956  methyl-accepting chemotaxis sensory transducer  45.95 
 
 
598 aa  254  4.0000000000000004e-66  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0136938 
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  47.38 
 
 
596 aa  253  5.000000000000001e-66  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_4071  methyl-accepting chemotaxis sensory transducer  40.05 
 
 
553 aa  253  5.000000000000001e-66  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4703  methyl-accepting chemotaxis sensory transducer  50 
 
 
659 aa  253  8.000000000000001e-66  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_0034  methyl-accepting chemotaxis sensory transducer  47.11 
 
 
649 aa  252  1e-65  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.38678  n/a   
 
 
-
 
NC_010002  Daci_3266  methyl-accepting chemotaxis sensory transducer  49.19 
 
 
650 aa  252  1e-65  Delftia acidovorans SPH-1  Bacteria  normal  0.50478  hitchhiker  0.0000385615 
 
 
-
 
NC_009708  YpsIP31758_4122  methyl-accepting chemotaxis protein  47.11 
 
 
649 aa  252  1e-65  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1542  methyl-accepting chemotaxis sensory transducer  43.94 
 
 
566 aa  252  1e-65  Dickeya zeae Ech1591  Bacteria  normal  0.350049  n/a   
 
 
-
 
NC_008782  Ajs_3087  methyl-accepting chemotaxis sensory transducer  47.63 
 
 
527 aa  252  1e-65  Acidovorax sp. JS42  Bacteria  normal  normal  0.823637 
 
 
-
 
NC_010159  YpAngola_A3516  methyl-accepting chemotaxis protein  50 
 
 
557 aa  251  2e-65  Yersinia pestis Angola  Bacteria  normal  normal  0.698348 
 
 
-
 
NC_010002  Daci_4297  methyl-accepting chemotaxis sensory transducer  49.51 
 
 
471 aa  252  2e-65  Delftia acidovorans SPH-1  Bacteria  decreased coverage  0.00689697  normal 
 
 
-
 
NC_008752  Aave_2496  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
537 aa  251  2e-65  Acidovorax citrulli AAC00-1  Bacteria  decreased coverage  0.00000862286  decreased coverage  0.00394801 
 
 
-
 
NC_012560  Avin_27970  chemotaxis sensory transducer  50.66 
 
 
575 aa  251  3e-65  Azotobacter vinelandii DJ  Bacteria  normal  0.0997024  n/a   
 
 
-
 
NC_012880  Dd703_1514  methyl-accepting chemotaxis sensory transducer  43.54 
 
 
562 aa  251  3e-65  Dickeya dadantii Ech703  Bacteria  normal  0.957025  n/a   
 
 
-
 
NC_010465  YPK_1753  methyl-accepting chemotaxis sensory transducer  50 
 
 
557 aa  250  4e-65  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_1642  methyl-accepting chemotaxis protein  50 
 
 
557 aa  250  4e-65  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010524  Lcho_4044  methyl-accepting chemotaxis sensory transducer  51.42 
 
 
644 aa  250  4e-65  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000000893288 
 
 
-
 
NC_008786  Veis_0400  methyl-accepting chemotaxis sensory transducer  49.69 
 
 
602 aa  250  4e-65  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.0817302 
 
 
-
 
NC_008752  Aave_4303  methyl-accepting chemotaxis sensory transducer  41.44 
 
 
528 aa  250  5e-65  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A4084  methyl-accepting chemotaxis sensory transducer  37.28 
 
 
511 aa  249  6e-65  Burkholderia sp. 383  Bacteria  normal  0.51282  normal  0.262349 
 
 
-
 
NC_008752  Aave_4294  methyl-accepting chemotaxis sensory transducer  48.55 
 
 
539 aa  249  6e-65  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5306  methyl-accepting chemotaxis sensory transducer  46.98 
 
 
565 aa  249  7e-65  Cupriavidus metallidurans CH34  Bacteria  decreased coverage  0.00488588  normal  0.0415564 
 
 
-
 
NC_010557  BamMC406_5887  methyl-accepting chemotaxis sensory transducer  49.02 
 
 
519 aa  249  8e-65  Burkholderia ambifaria MC40-6  Bacteria  normal  0.330697  normal 
 
 
-
 
NC_007348  Reut_B5868  methyl-accepting chemotaxis sensory transducer  47.92 
 
 
541 aa  249  9e-65  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1771  methyl-accepting chemotaxis sensory transducer  47.53 
 
 
520 aa  249  1e-64  Ralstonia pickettii 12D  Bacteria  normal  normal  0.841752 
 
 
-
 
NC_010002  Daci_4877  methyl-accepting chemotaxis sensory transducer  51.96 
 
 
614 aa  249  1e-64  Delftia acidovorans SPH-1  Bacteria  normal  0.296639  normal 
 
 
-
 
NC_011149  SeAg_B3326  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
547 aa  249  1e-64  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_011205  SeD_A3501  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
547 aa  249  1e-64  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.601659  normal 
 
 
-
 
NC_008392  Bamb_6127  methyl-accepting chemotaxis sensory transducer  49.02 
 
 
519 aa  248  1e-64  Burkholderia ambifaria AMMD  Bacteria  normal  normal  0.0128017 
 
 
-
 
NC_011080  SNSL254_A3406  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
547 aa  249  1e-64  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_2019  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
567 aa  248  2e-64  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
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