More than 300 homologs were found in PanDaTox collection
for query gene Mext_3893 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_4261  methyl-accepting chemotaxis sensory transducer  97.94 
 
 
679 aa  1092    Methylobacterium chloromethanicum CM4  Bacteria  normal  0.131059  normal  0.834811 
 
 
-
 
NC_010172  Mext_3893  nitrate and nitrite sensing domain-containing protein  100 
 
 
679 aa  1272    Methylobacterium extorquens PA1  Bacteria  normal  normal  0.252207 
 
 
-
 
NC_010725  Mpop_4364  methyl-accepting chemotaxis sensory transducer  87.99 
 
 
694 aa  937    Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1563  methyl-accepting chemotaxis sensory transducer  58.65 
 
 
682 aa  525  1e-147  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.543621  normal  0.0909129 
 
 
-
 
NC_010511  M446_3706  methyl-accepting chemotaxis sensory transducer  49.41 
 
 
684 aa  389  1e-106  Methylobacterium sp. 4-46  Bacteria  normal  0.677815  hitchhiker  0.00614515 
 
 
-
 
NC_009485  BBta_0969  methyl-accepting chemotaxis sensory transducer  46.44 
 
 
562 aa  264  4e-69  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.956339  normal  0.570918 
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  47.01 
 
 
567 aa  261  2e-68  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_0330  putative methyl-accepting chemotaxis receptor/sensory transducer  46.93 
 
 
676 aa  257  5e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0869057 
 
 
-
 
NC_009485  BBta_6635  methyl-accepting chemotaxis protein  45.09 
 
 
565 aa  257  5e-67  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.459746  normal  0.104137 
 
 
-
 
NC_011004  Rpal_3598  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
672 aa  254  2.0000000000000002e-66  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3107  chemotaxis sensory transducer  45.93 
 
 
674 aa  255  2.0000000000000002e-66  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0664997 
 
 
-
 
NC_009485  BBta_4464  methyl-accepting chemotaxis sensory transducer  44.41 
 
 
573 aa  251  2e-65  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.610641  normal  0.757777 
 
 
-
 
NC_007925  RPC_1795  methyl-accepting chemotaxis sensory transducer  46.68 
 
 
561 aa  251  4e-65  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.432423  normal  0.0230577 
 
 
-
 
NC_007778  RPB_2358  methyl-accepting chemotaxis sensory transducer  42.12 
 
 
673 aa  250  7e-65  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.207811 
 
 
-
 
NC_011757  Mchl_3733  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
558 aa  248  2e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.152196  normal 
 
 
-
 
NC_010172  Mext_3424  chemotaxis sensory transducer  44.89 
 
 
558 aa  248  2e-64  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.574813 
 
 
-
 
NC_010172  Mext_2555  chemotaxis sensory transducer  48.7 
 
 
561 aa  248  4e-64  Methylobacterium extorquens PA1  Bacteria  normal  0.834906  normal 
 
 
-
 
NC_009485  BBta_2904  putative methyl-accepting chemotaxis protein  43.49 
 
 
568 aa  247  4e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481458  normal  0.283558 
 
 
-
 
NC_010172  Mext_3147  chemotaxis sensory transducer  47.33 
 
 
561 aa  247  4.9999999999999997e-64  Methylobacterium extorquens PA1  Bacteria  normal  0.0908078  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  44.72 
 
 
688 aa  246  6.999999999999999e-64  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_011757  Mchl_2346  methyl-accepting chemotaxis sensory transducer  49.44 
 
 
556 aa  246  6.999999999999999e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.395485 
 
 
-
 
NC_010172  Mext_2072  chemotaxis sensory transducer  49.15 
 
 
556 aa  246  9.999999999999999e-64  Methylobacterium extorquens PA1  Bacteria  normal  0.68132  normal  0.341201 
 
 
-
 
NC_009485  BBta_6717  methyl-accepting chemotaxis sensory transducer  46.49 
 
 
741 aa  246  9.999999999999999e-64  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.447835  normal  0.587139 
 
 
-
 
NC_007778  RPB_4280  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
563 aa  246  9.999999999999999e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_3471  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
561 aa  246  9.999999999999999e-64  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.130295  normal 
 
 
-
 
NC_010505  Mrad2831_3824  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
561 aa  245  1.9999999999999999e-63  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_1388  methyl-accepting chemotaxis sensory transducer  45.88 
 
 
656 aa  244  3e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0527529  normal  0.207734 
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  44.1 
 
 
568 aa  244  3e-63  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  42.58 
 
 
565 aa  244  3e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  44.51 
 
 
688 aa  244  3e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_011004  Rpal_1830  methyl-accepting chemotaxis sensory transducer  44.33 
 
 
563 aa  244  3.9999999999999997e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3547  chemotaxis sensory transducer  41.46 
 
 
566 aa  244  3.9999999999999997e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2149  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
675 aa  243  6e-63  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.0391093 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  47.61 
 
 
562 aa  242  2e-62  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_011757  Mchl_3907  methyl-accepting chemotaxis sensory transducer  44.87 
 
 
565 aa  241  2.9999999999999997e-62  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1266  chemotaxis sensory transducer  47.87 
 
 
562 aa  241  4e-62  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_1427  methyl-accepting chemotaxis sensory transducer  47.87 
 
 
562 aa  241  4e-62  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.309452  normal 
 
 
-
 
NC_007925  RPC_3161  methyl-accepting chemotaxis sensory transducer  42.25 
 
 
731 aa  240  5e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.072786  normal 
 
 
-
 
NC_011004  Rpal_2757  methyl-accepting chemotaxis sensory transducer  44.69 
 
 
561 aa  241  5e-62  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0630329  n/a   
 
 
-
 
NC_007958  RPD_0497  chemotaxis sensory transducer  45.48 
 
 
577 aa  240  5.999999999999999e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
689 aa  240  8e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_011757  Mchl_2778  methyl-accepting chemotaxis sensory transducer  48.19 
 
 
558 aa  239  1e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.060825  normal 
 
 
-
 
NC_011757  Mchl_5373  methyl-accepting chemotaxis sensory transducer  48.34 
 
 
565 aa  238  2e-61  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.620524  normal  0.472724 
 
 
-
 
NC_011004  Rpal_4783  methyl-accepting chemotaxis sensory transducer  42.38 
 
 
730 aa  238  3e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2368  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  45.12 
 
 
561 aa  238  3e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.280114 
 
 
-
 
NC_009485  BBta_6483  methyl-accepting chemotaxis protein  43.41 
 
 
565 aa  237  5.0000000000000005e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.877741  normal 
 
 
-
 
NC_010511  M446_2544  methyl-accepting chemotaxis sensory transducer  49.3 
 
 
566 aa  237  5.0000000000000005e-61  Methylobacterium sp. 4-46  Bacteria  normal  0.476321  normal 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  44.2 
 
 
567 aa  237  6e-61  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_2241  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
566 aa  237  6e-61  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0820  chemotaxis sensory transducer  44.32 
 
 
608 aa  237  6e-61  Methylobacterium extorquens PA1  Bacteria  normal  0.254614  normal  0.216431 
 
 
-
 
NC_007958  RPD_1918  chemotaxis sensory transducer  42.82 
 
 
688 aa  237  6e-61  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.537222 
 
 
-
 
NC_010725  Mpop_3344  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
561 aa  236  7e-61  Methylobacterium populi BJ001  Bacteria  normal  0.828703  normal 
 
 
-
 
NC_009485  BBta_7508  putative methyl-accepting chemotaxis protein (with a HAMP region)  46.02 
 
 
552 aa  236  8e-61  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.692825  normal 
 
 
-
 
NC_007778  RPB_2983  methyl-accepting chemotaxis sensory transducer  44.71 
 
 
561 aa  236  1.0000000000000001e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.0323515 
 
 
-
 
NC_010725  Mpop_0581  methyl-accepting chemotaxis sensory transducer  43.29 
 
 
562 aa  236  1.0000000000000001e-60  Methylobacterium populi BJ001  Bacteria  normal  0.0281709  decreased coverage  0.00474558 
 
 
-
 
NC_007778  RPB_0192  methyl-accepting chemotaxis sensory transducer  44.38 
 
 
688 aa  234  3e-60  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_3380  methyl-accepting chemotaxis sensory transducer  42.18 
 
 
567 aa  234  3e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.689596 
 
 
-
 
NC_007925  RPC_0061  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
674 aa  234  4.0000000000000004e-60  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1857  chemotaxis sensory transducer  43.11 
 
 
563 aa  234  5e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_2465  chemotaxis sensory transducer  43.77 
 
 
561 aa  234  5e-60  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.5909  normal  0.697276 
 
 
-
 
NC_010511  M446_0383  methyl-accepting chemotaxis sensory transducer  46.76 
 
 
559 aa  233  6e-60  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.50218 
 
 
-
 
NC_010725  Mpop_0223  methyl-accepting chemotaxis sensory transducer  47.11 
 
 
565 aa  233  8.000000000000001e-60  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_2091  methyl-accepting chemotaxis sensory transducer  42.96 
 
 
562 aa  233  1e-59  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.0245477 
 
 
-
 
NC_010505  Mrad2831_1766  methyl-accepting chemotaxis sensory transducer  47.59 
 
 
575 aa  233  1e-59  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2903  methyl-accepting chemotaxis sensory transducer  43.07 
 
 
568 aa  233  1e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.335645  normal  0.0996392 
 
 
-
 
NC_007778  RPB_0914  methyl-accepting chemotaxis sensory transducer  44.47 
 
 
689 aa  232  2e-59  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.497103 
 
 
-
 
NC_011757  Mchl_0779  methyl-accepting chemotaxis sensory transducer with Cache sensor  44.13 
 
 
558 aa  232  2e-59  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0546434  normal  0.151916 
 
 
-
 
NC_007925  RPC_3379  methyl-accepting chemotaxis sensory transducer  44.5 
 
 
587 aa  231  2e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.787169  normal 
 
 
-
 
NC_007925  RPC_3804  methyl-accepting chemotaxis sensory transducer  43.92 
 
 
655 aa  231  2e-59  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.772812  normal 
 
 
-
 
NC_007958  RPD_1025  methyl-accepting chemotaxis sensory transducer  45.3 
 
 
681 aa  232  2e-59  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5119  methyl-accepting chemotaxis sensory transducer  43.87 
 
 
563 aa  231  3e-59  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4549  methyl-accepting chemotaxis sensory transducer  48.18 
 
 
561 aa  231  4e-59  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  46.39 
 
 
674 aa  231  4e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_009485  BBta_2906  putative methyl-accepting chemotaxis protein  45.9 
 
 
564 aa  230  5e-59  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.430156  normal  0.106702 
 
 
-
 
NC_007778  RPB_2250  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
670 aa  229  1e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_2744  methyl-accepting chemotaxis sensory transducer  40.46 
 
 
572 aa  229  1e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.696609  normal  0.585687 
 
 
-
 
NC_007925  RPC_4407  methyl-accepting chemotaxis sensory transducer  43.17 
 
 
566 aa  229  1e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.365939 
 
 
-
 
NC_007643  Rru_A0568  chemotaxis sensory transducer  42.74 
 
 
662 aa  228  2e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  50.18 
 
 
438 aa  229  2e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2367  putative methyl-accepting chemotaxis receptor/sensory transducer precursor  44.63 
 
 
562 aa  228  2e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.287749 
 
 
-
 
NC_009485  BBta_2905  putative methyl-accepting chemotaxis protein  42.82 
 
 
542 aa  228  2e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.234112  normal  0.211145 
 
 
-
 
NC_007778  RPB_1321  methyl-accepting chemotaxis sensory transducer  45.89 
 
 
730 aa  228  2e-58  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0177086  normal  0.260794 
 
 
-
 
NC_010505  Mrad2831_0796  methyl-accepting chemotaxis sensory transducer  47.24 
 
 
558 aa  228  2e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.579527 
 
 
-
 
NC_007925  RPC_1843  methyl-accepting chemotaxis sensory transducer  45.01 
 
 
568 aa  228  3e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.618754 
 
 
-
 
NC_009485  BBta_2907  putative methyl-accepting chemotaxis protein  46.57 
 
 
556 aa  228  3e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.835875  normal  0.0729634 
 
 
-
 
NC_010172  Mext_0191  chemotaxis sensory transducer  47.7 
 
 
565 aa  228  4e-58  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.731843 
 
 
-
 
NC_007925  RPC_4406  methyl-accepting chemotaxis sensory transducer  41.29 
 
 
566 aa  227  4e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.341232 
 
 
-
 
NC_010505  Mrad2831_4059  methyl-accepting chemotaxis sensory transducer  47.75 
 
 
563 aa  227  5.0000000000000005e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.193865  normal 
 
 
-
 
NC_011757  Mchl_0134  methyl-accepting chemotaxis sensory transducer  43.1 
 
 
565 aa  227  5.0000000000000005e-58  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.150747 
 
 
-
 
NC_009485  BBta_1536  methyl-accepting chemotaxis protein  45.71 
 
 
716 aa  227  7e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.284447 
 
 
-
 
NC_010511  M446_0370  methyl-accepting chemotaxis sensory transducer  48.42 
 
 
560 aa  227  7e-58  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.52335 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  49.65 
 
 
449 aa  226  7e-58  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
NC_011004  Rpal_4941  methyl-accepting chemotaxis sensory transducer  44.84 
 
 
563 aa  227  7e-58  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.396774  n/a   
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  43.43 
 
 
656 aa  226  7e-58  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_010172  Mext_0141  chemotaxis sensory transducer  48.62 
 
 
565 aa  226  8e-58  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_3081  methyl-accepting chemotaxis sensory transducer  47.28 
 
 
562 aa  226  9e-58  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.53055  normal 
 
 
-
 
NC_009485  BBta_0575  methyl-accepting chemotaxis sensory transducer  44.29 
 
 
681 aa  226  9e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2900  putative methyl-accepting chemotaxis receptor/sensory transducer (chemoreceptor)  45.95 
 
 
675 aa  226  9e-58  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.142675  normal  0.173139 
 
 
-
 
NC_009485  BBta_2908  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.73 
 
 
561 aa  226  1e-57  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.07018 
 
 
-
 
NC_011004  Rpal_1871  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.65 
 
 
716 aa  226  1e-57  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
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