257 homologs were found in PanDaTox collection
for query gene Hhal_1249 on replicon NC_008789
Organism: Halorhodospira halophila SL1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008789  Hhal_1249  ComEC/Rec2-related protein  100 
 
 
710 aa  1352    Halorhodospira halophila SL1  Bacteria  normal  0.435974  n/a   
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  44.59 
 
 
770 aa  296  8e-79  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1437  ComEC/Rec2-related protein  45 
 
 
750 aa  281  3e-74  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.715322 
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  37.5 
 
 
784 aa  280  6e-74  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  32.2 
 
 
802 aa  249  1e-64  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  35.33 
 
 
766 aa  235  2.0000000000000002e-60  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  34.77 
 
 
929 aa  233  7.000000000000001e-60  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  36.22 
 
 
801 aa  233  8.000000000000001e-60  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  36.98 
 
 
825 aa  232  2e-59  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  36.97 
 
 
801 aa  230  8e-59  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  39.73 
 
 
835 aa  222  1.9999999999999999e-56  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  34.41 
 
 
772 aa  219  1e-55  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  35.77 
 
 
822 aa  219  2e-55  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  35.77 
 
 
778 aa  215  1.9999999999999998e-54  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  32.79 
 
 
801 aa  215  1.9999999999999998e-54  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  38.39 
 
 
776 aa  214  3.9999999999999995e-54  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  30.63 
 
 
841 aa  212  2e-53  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  29.97 
 
 
839 aa  212  2e-53  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  35.83 
 
 
829 aa  209  1e-52  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  36.87 
 
 
738 aa  208  3e-52  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  35.54 
 
 
843 aa  205  3e-51  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  35.3 
 
 
833 aa  204  4e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  34.06 
 
 
806 aa  204  6e-51  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  37.57 
 
 
738 aa  201  3e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_006368  lpp0680  hypothetical protein  26.2 
 
 
735 aa  200  7e-50  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  34.25 
 
 
845 aa  200  7e-50  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  36.18 
 
 
846 aa  199  2.0000000000000003e-49  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_006369  lpl0663  hypothetical protein  25.88 
 
 
735 aa  196  1e-48  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  37.06 
 
 
747 aa  196  1e-48  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  35.49 
 
 
830 aa  196  1e-48  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  32.32 
 
 
851 aa  196  1e-48  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  34.93 
 
 
800 aa  192  2e-47  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  33.77 
 
 
860 aa  190  8e-47  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  35.5 
 
 
829 aa  189  1e-46  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  35.21 
 
 
839 aa  188  3e-46  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  34.74 
 
 
766 aa  188  4e-46  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  34.69 
 
 
847 aa  187  7e-46  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  36.07 
 
 
776 aa  187  7e-46  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  34.05 
 
 
878 aa  185  3e-45  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  35.3 
 
 
819 aa  184  5.0000000000000004e-45  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  36.56 
 
 
737 aa  183  8.000000000000001e-45  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  35.55 
 
 
829 aa  183  8.000000000000001e-45  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  35.55 
 
 
829 aa  183  8.000000000000001e-45  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  34.03 
 
 
833 aa  182  2e-44  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  35.4 
 
 
840 aa  181  2.9999999999999997e-44  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  37.36 
 
 
737 aa  181  4.999999999999999e-44  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  34.48 
 
 
840 aa  181  4.999999999999999e-44  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  34.73 
 
 
832 aa  180  1e-43  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  35.49 
 
 
747 aa  177  8e-43  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  35.13 
 
 
845 aa  174  2.9999999999999996e-42  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  36.21 
 
 
861 aa  173  7.999999999999999e-42  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  33.11 
 
 
768 aa  173  7.999999999999999e-42  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  26.1 
 
 
860 aa  173  1e-41  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  36.72 
 
 
738 aa  173  1e-41  Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  37.02 
 
 
738 aa  170  1e-40  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  36.72 
 
 
741 aa  168  2.9999999999999998e-40  Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  30.76 
 
 
762 aa  167  4e-40  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  35.99 
 
 
799 aa  167  6.9999999999999995e-40  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  39.9 
 
 
711 aa  166  2.0000000000000002e-39  Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_009457  VC0395_A1470  ComEC/rec2 family protein  32.45 
 
 
752 aa  166  2.0000000000000002e-39  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  36.4 
 
 
740 aa  164  4.0000000000000004e-39  Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  35.19 
 
 
948 aa  161  5e-38  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_011206  Lferr_0644  ComEC/Rec2-related protein  31.98 
 
 
700 aa  160  8e-38  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.851772  normal 
 
 
-
 
NC_011761  AFE_0484  DNA internalization-related competence protein ComEC/Rec2  31.98 
 
 
736 aa  160  1e-37  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  29.72 
 
 
765 aa  159  2e-37  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_008463  PA14_25480  putative competence protein  35.49 
 
 
741 aa  152  2e-35  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  39.06 
 
 
842 aa  145  2e-33  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  39.06 
 
 
856 aa  146  2e-33  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  39.06 
 
 
856 aa  146  2e-33  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  39.06 
 
 
856 aa  146  2e-33  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1818  DNA internalization-related competence protein ComEC/Rec2  30.02 
 
 
765 aa  144  5e-33  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0856288  normal  0.218544 
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  36.75 
 
 
758 aa  142  1.9999999999999998e-32  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  31.36 
 
 
737 aa  137  9e-31  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_009831  Ssed_2827  DNA internalization-related competence protein ComEC/Rec2  28.55 
 
 
767 aa  129  2.0000000000000002e-28  Shewanella sediminis HAW-EB3  Bacteria  normal  normal  0.0829289 
 
 
-
 
NC_009438  Sputcn32_1556  DNA internalization-related competence protein ComEC/Rec2  33.84 
 
 
774 aa  128  4.0000000000000003e-28  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_2389  DNA internalization-related competence protein ComEC/Rec2  23.69 
 
 
831 aa  128  5e-28  Shewanella frigidimarina NCIMB 400  Bacteria  decreased coverage  0.00142105  n/a   
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  25.74 
 
 
773 aa  127  8.000000000000001e-28  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  25.54 
 
 
812 aa  125  3e-27  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_009783  VIBHAR_01534  hypothetical protein  26.47 
 
 
752 aa  125  3e-27  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  26.99 
 
 
773 aa  125  4e-27  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  25.74 
 
 
773 aa  124  5e-27  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_008709  Ping_0899  DNA internalization-related competence protein ComEC/Rec2  27.31 
 
 
798 aa  123  9.999999999999999e-27  Psychromonas ingrahamii 37  Bacteria  normal  0.383263  normal  0.740662 
 
 
-
 
NC_009436  Ent638_1432  hypothetical protein  29.22 
 
 
754 aa  121  3.9999999999999996e-26  Enterobacter sp. 638  Bacteria  normal  0.0687894  normal 
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  27.22 
 
 
783 aa  118  3.9999999999999997e-25  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1667  DNA internalization-related competence protein ComEC/Rec2  33.55 
 
 
795 aa  116  1.0000000000000001e-24  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  30.81 
 
 
840 aa  115  2.0000000000000002e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  29.9 
 
 
783 aa  115  2.0000000000000002e-24  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
NC_008309  HS_1022  recombination protein 2  29.82 
 
 
808 aa  115  3e-24  Haemophilus somnus 129PT  Bacteria  normal  0.949854  n/a   
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  25.39 
 
 
778 aa  114  4.0000000000000004e-24  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2578  hypothetical protein  27.6 
 
 
763 aa  114  5e-24  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0251432  n/a   
 
 
-
 
NC_010465  YPK_2666  hypothetical protein  27.6 
 
 
763 aa  114  6e-24  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1704  DNA internalization-related competence protein ComEC/Rec2  28.64 
 
 
783 aa  114  6e-24  Shewanella baltica OS195  Bacteria  normal  0.0286912  normal 
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  27.66 
 
 
763 aa  112  3e-23  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011094  SeSA_A1097  hypothetical protein  29.42 
 
 
756 aa  112  3e-23  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_2803  DNA internalization-related competence protein ComEC/Rec2  27.65 
 
 
769 aa  111  4.0000000000000004e-23  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010159  YpAngola_A1958  hypothetical protein  27.08 
 
 
763 aa  111  6e-23  Yersinia pestis Angola  Bacteria  hitchhiker  0.0001218  normal  0.195131 
 
 
-
 
NC_011149  SeAg_B0989  hypothetical protein  28.34 
 
 
737 aa  110  6e-23  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  24.49 
 
 
754 aa  110  9.000000000000001e-23  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
CP001509  ECD_00917  conserved inner membrane protein  24.29 
 
 
754 aa  109  1e-22  Escherichia coli BL21(DE3)  Bacteria  normal  0.578469  n/a   
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  24.29 
 
 
754 aa  109  1e-22  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
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