| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lferr_0644 |
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| Symbol | |
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| ID | 6876606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 53993 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011206 |
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| Strand | + |
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| Start bp | 603044 |
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| End bp | 605146 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642788526 |
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| Product | ComEC/Rec2-related protein |
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| Protein accession | YP_002219104 |
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| Protein GI | 198282783 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0658] Predicted membrane metal-binding protein |
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| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.851772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGCTGG GGCTGGGGTT TTTTCACAGC TTCCGGCAAC TGCCAGCTTT GTGGATTCCG
CTTTCCGTAG CGCTTCCCGG ACTGCTCCTG GTTTGGAAAT GGCGGCCTGC GCTGCTGTTG
ACCGTCGCAG CGGGGGCCTT TGCCTGGGGC ATCTGGCAGG CCGATCTGCG CCTCGCCGTA
CAGTGGCCGG TGGGCCAGGA CTTCAGTGTC CGGGGGCGCA TCGTTTCCAT ACCCCAATTG
GGGGGCCGGG AATATCGCTT TCTGGTGGCG CCCGAGCACT GGCCGGCAGA AGCCCCTGCG
GGTGCCCGGC CTGACACCAT TCTCGTTCAC GGTAATCTTC CGGAAGTCCC CGTAGTCGGG
CAACGCTGGC AGTTGCGGTT GCACAGTGAG TCTCTTGCCA GCCTGCCCGG CAGCCCCTTT
GCCGACCTCG CCCGGCAGCG TTTCTGGGCC GGGGAGGGTG GGGTGGCACG GCTGCAGGAT
GCCCGGCTGT TGCCGGTTTC CCGCATGAAT CTCCAGGACG ACATCGCAGT GGCCCGTGAG
GCGGTGCTCC ATGCCAGCAA TATGGCCCTG GACCGCGAAG CGGCAGGTTT TGTGCAGGCA
CTGAGTATTG GTGTCGGTAA CCAGCTCCCG CCGGAGATCT GGCAGGTCTA CCGGGATACG
GGCACCGCCC ACTTGTTGGT GATCTCCGGT TCCCACGTGG CCGCGGTCGC CGGGCTGGCC
CTGTGGCTCG GTCAGTGGCT GTGGCGGCGT ATCCCCTGGC TGGTCGCTCG CTGGCCGGCG
CAGACGGCAG GAGTCCTCTG CAGCATCCCG GCGGCTTGGG GCTATGCCAG TTTTGCCGGC
ATGCAGATTC CGGGTGAGCG CGCCGCCTGG ATGATCACGG CAGCGGCACT CGCCCATCTG
CTGGGACGCC CAAACAACGC CTGGCAAGGG CTGTCCCTGG CCGCCCTGCT CATTGCCTTC
GGAAACCCCG GCGCGCTGGT GGATGTGGGA TTCTGGCTTT CTCTGGGCGC CGTGGCCGTG
TTGGTGGCCA TCGGCTATGG GGAAGGCGGC TGGCGCACCT TGCTGCGCAG CCAGTGGATG
GTTTCCATTG CCCTGATGCC TTTACTGGCG GGACTCTTCG GACAAGTTTC CCTGATTTCC
CCGATTGCAA ACGTGTTGGT GATCCCGCTG GTCGAGATGC TTGCGGTGCC CCTGGCCCTG
CTAGGCGCTT TTTTTGCACT GCTGGATCTG GAACTGCTCA GCCGCCTGCT CTTTCATCTG
GTGGCGCTGG AAATGGATGC AGTGACCGCA TTGCTGCGCA TTCTGCTGCA TATCCCATTT
GCGCGGGTCA GCACGGGTAT GGGTCGCACC TGGGCCTTGC TGGCGGCGGT GCTGGGGCTC
GGCATCTTTT TTCTGCCGCC GGGCTGGCCA GGGCGCCTCC TGGCTTTGCT GGGCATGGTA
CCGCTCCTGA TCCCCGCCGG GGGTACCGCT GATCTGGAAT TGCGTGCCCT GGATGCAGGA
TCCGGCATGC TGCTGTTCTG GCAGAAGGGG TCACAGAGCG GTATTTTCTC GGCAAATCTC
TGGAAGGCGG CCAGCCGCCG CAGCGGCAGC CTCGCGCTTA CGGCGGCGCT GCGCCAGCAG
GGCGTGACAC GGGTGGATGC ATGGTTACGC AGCGACATTT CCGCACCCCA GCCACTGCCT
GTTGCTGCCC GTCAGTGGTG GCCTGCCGGA GCCCGCGATT ATCCCGGAGG GCCGCCGACA
TCGGCCTTCT GTCGAACCGA CGGTGGTACA CCGGCAGAGA TGCATTTCCT GACCTTGAAT
GCACCTGTCC AGCCCTGCAT AGTGACCTGG GGAGCCGGAC CCGATGTGCT GATTCTGGGT
GACGCCGATG CCGCGACGGT CCATCGTCTT GTCGCGGAGC ACGGTGCCGC GTTGCATCGA
GCGCAGGCCA TCTTTGCCCC TGCCAGTCTG GGCAACACGG AAAGAGCGGC GTTAGGGGCT
GCCGCAGCAC AGGCACGGGT CTTTTATCTG GGCGAGGGCA AGCCGGGCAC ATGGACCTGG
CAGGCCGGGC GCTTACGTCA CGTCCTGCCG CCATCGCCCG CCTACTGGCA ACCCGGCGCC
TGA
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| Protein sequence | MGLGLGFFHS FRQLPALWIP LSVALPGLLL VWKWRPALLL TVAAGAFAWG IWQADLRLAV
QWPVGQDFSV RGRIVSIPQL GGREYRFLVA PEHWPAEAPA GARPDTILVH GNLPEVPVVG
QRWQLRLHSE SLASLPGSPF ADLARQRFWA GEGGVARLQD ARLLPVSRMN LQDDIAVARE
AVLHASNMAL DREAAGFVQA LSIGVGNQLP PEIWQVYRDT GTAHLLVISG SHVAAVAGLA
LWLGQWLWRR IPWLVARWPA QTAGVLCSIP AAWGYASFAG MQIPGERAAW MITAAALAHL
LGRPNNAWQG LSLAALLIAF GNPGALVDVG FWLSLGAVAV LVAIGYGEGG WRTLLRSQWM
VSIALMPLLA GLFGQVSLIS PIANVLVIPL VEMLAVPLAL LGAFFALLDL ELLSRLLFHL
VALEMDAVTA LLRILLHIPF ARVSTGMGRT WALLAAVLGL GIFFLPPGWP GRLLALLGMV
PLLIPAGGTA DLELRALDAG SGMLLFWQKG SQSGIFSANL WKAASRRSGS LALTAALRQQ
GVTRVDAWLR SDISAPQPLP VAARQWWPAG ARDYPGGPPT SAFCRTDGGT PAEMHFLTLN
APVQPCIVTW GAGPDVLILG DADAATVHRL VAEHGAALHR AQAIFAPASL GNTERAALGA
AAAQARVFYL GEGKPGTWTW QAGRLRHVLP PSPAYWQPGA
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