245 homologs were found in PanDaTox collection
for query gene Lferr_0644 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011206  Lferr_0644  ComEC/Rec2-related protein  100 
 
 
700 aa  1349    Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.851772  normal 
 
 
-
 
NC_011761  AFE_0484  DNA internalization-related competence protein ComEC/Rec2  100 
 
 
736 aa  1350    Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_2093  DNA internalization-related competence protein ComEC/Rec2  31.65 
 
 
802 aa  184  5.0000000000000004e-45  Methylobacillus flagellatus KT  Bacteria  normal  0.35183  normal 
 
 
-
 
NC_011901  Tgr7_1368  DNA internalization-related competence protein ComEC/Rec2  33.39 
 
 
770 aa  165  3e-39  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_2672  DNA internalization-related competence protein ComEC/Rec2  31.33 
 
 
784 aa  164  8.000000000000001e-39  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_007614  Nmul_A2506  DNA internalization-related competence protein ComEC/Rec2  28.21 
 
 
766 aa  154  5e-36  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_2832  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  32.79 
 
 
772 aa  150  9e-35  Dechloromonas aromatica RCB  Bacteria  normal  0.395271  normal 
 
 
-
 
NC_010622  Bphy_1443  DNA internalization-related competence protein ComEC/Rec2  30.46 
 
 
843 aa  144  4e-33  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1990  DNA internalization-related competence protein ComEC/Rec2  34.71 
 
 
835 aa  141  3.9999999999999997e-32  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007951  Bxe_A1569  ComEC/Rec2-related protein  29.93 
 
 
801 aa  140  7.999999999999999e-32  Burkholderia xenovorans LB400  Bacteria  normal  normal  0.304315 
 
 
-
 
NC_010513  Xfasm12_0386  DNA uptake protein  32.33 
 
 
825 aa  140  8.999999999999999e-32  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_1465  DNA internalization-related competence protein ComEC/Rec2  26.68 
 
 
801 aa  139  2e-31  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2564  DNA internalization-related competence protein ComEC/Rec2  30.81 
 
 
929 aa  136  9.999999999999999e-31  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0267783  normal  0.0941772 
 
 
-
 
NC_010577  XfasM23_0350  DNA internalization-related competence protein ComEC/Rec2  32.19 
 
 
822 aa  136  9.999999999999999e-31  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1429  DNA internalization-related competence protein ComEC/Rec2  29.21 
 
 
840 aa  135  3.9999999999999996e-30  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_007404  Tbd_1759  DNA internalization-related competence protein ComEC/Rec2  28.94 
 
 
778 aa  133  1.0000000000000001e-29  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
NC_011071  Smal_1395  DNA internalization-related competence protein ComEC/Rec2  32.24 
 
 
799 aa  124  8e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.751306  normal 
 
 
-
 
NC_007908  Rfer_2476  DNA internalization-related competence protein ComEC/Rec2  30.43 
 
 
766 aa  120  7e-26  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_006369  lpl0663  hypothetical protein  26.46 
 
 
735 aa  120  9.999999999999999e-26  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_013889  TK90_1202  DNA internalization-related competence protein ComEC/Rec2  33.33 
 
 
776 aa  120  9.999999999999999e-26  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.177641 
 
 
-
 
NC_006368  lpp0680  hypothetical protein  26.94 
 
 
735 aa  119  1.9999999999999998e-25  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_010682  Rpic_0963  DNA internalization-related competence protein ComEC/Rec2  32.16 
 
 
840 aa  119  1.9999999999999998e-25  Ralstonia pickettii 12J  Bacteria  normal  0.116554  normal  0.0504124 
 
 
-
 
NC_007651  BTH_I1890  DNA internalization-related competence protein ComEC/Rec2  28.06 
 
 
845 aa  118  3.9999999999999997e-25  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_1059  DNA internalization-related competence protein ComEC/Rec2  32.77 
 
 
839 aa  117  6.9999999999999995e-25  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_4178  DNA internalization-like competence protein ComEC/Rec2  29.58 
 
 
747 aa  116  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.145225  normal  0.646667 
 
 
-
 
NC_007973  Rmet_1043  DNA internalization-related competence protein ComEC/Rec2  30.66 
 
 
851 aa  117  1.0000000000000001e-24  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.605949 
 
 
-
 
NC_008789  Hhal_1249  ComEC/Rec2-related protein  35.38 
 
 
710 aa  117  1.0000000000000001e-24  Halorhodospira halophila SL1  Bacteria  normal  0.435974  n/a   
 
 
-
 
NC_007347  Reut_A1079  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  28.57 
 
 
800 aa  115  4.0000000000000004e-24  Ralstonia eutropha JMP134  Bacteria  normal  0.723493  n/a   
 
 
-
 
NC_012791  Vapar_3404  DNA internalization-related competence protein ComEC/Rec2  32.74 
 
 
747 aa  115  4.0000000000000004e-24  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_0957  DNA internalization-related competence protein ComEC/Rec2  28 
 
 
841 aa  114  5e-24  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA1693  DNA internalization-related competence protein ComEC/Rec2  29.48 
 
 
842 aa  114  6e-24  Burkholderia mallei ATCC 23344  Bacteria  normal  0.891985  n/a   
 
 
-
 
NC_007434  BURPS1710b_2715  DNA internalization-related competence protein ComEC/Rec2  29.66 
 
 
842 aa  114  6e-24  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_2148  DNA internalization-related competence protein ComEC/Rec2  29.18 
 
 
829 aa  114  8.000000000000001e-24  Burkholderia ambifaria AMMD  Bacteria  normal  0.705314  n/a   
 
 
-
 
NC_008785  BMASAVP1_A2198  DNA internalization-related competence protein ComEC/Rec2  29.48 
 
 
856 aa  114  9e-24  Burkholderia mallei SAVP1  Bacteria  normal  0.975554  n/a   
 
 
-
 
NC_008836  BMA10229_A3120  DNA internalization-related competence protein ComEC/Rec2  29.48 
 
 
856 aa  114  9e-24  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_1471  DNA internalization-related competence protein ComEC/Rec2  29.48 
 
 
856 aa  114  9e-24  Burkholderia mallei NCTC 10247  Bacteria  normal  0.300879  n/a   
 
 
-
 
NC_009076  BURPS1106A_2636  DNA internalization-related competence protein ComEC/Rec2  29.48 
 
 
856 aa  113  1.0000000000000001e-23  Burkholderia pseudomallei 1106a  Bacteria  normal  0.0667077  n/a   
 
 
-
 
NC_010084  Bmul_1159  DNA internalization-related competence protein ComEC/Rec2  32.29 
 
 
819 aa  112  2.0000000000000002e-23  Burkholderia multivorans ATCC 17616  Bacteria  normal  hitchhiker  0.00785752 
 
 
-
 
NC_010551  BamMC406_2021  DNA internalization-related competence protein ComEC/Rec2  29.9 
 
 
833 aa  112  2.0000000000000002e-23  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.130557 
 
 
-
 
NC_009074  BURPS668_2581  DNA internalization-related competence protein ComEC/Rec2  29.48 
 
 
856 aa  113  2.0000000000000002e-23  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_0933  DNA internalization-related competence protein ComEC/Rec2  38.1 
 
 
861 aa  112  3e-23  Acidovorax ebreus TPSY  Bacteria  normal  0.337545  n/a   
 
 
-
 
NC_008786  Veis_0403  DNA internalization-related competence protein ComEC/Rec2  31.28 
 
 
878 aa  112  3e-23  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.105029 
 
 
-
 
NC_007005  Psyr_1632  ComEC/Rec2-related protein:DNA internalization-related competence protein ComEC/Rec2  33.05 
 
 
738 aa  108  3e-22  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.599163 
 
 
-
 
NC_008825  Mpe_A2554  putative transporter DNA uptake transmembrane protein  30.17 
 
 
846 aa  107  6e-22  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_004578  PSPTO_3848  DNA internalization-related competence protein ComEC/Rec2  30.63 
 
 
738 aa  107  7e-22  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_1205  DNA internalization-related competence protein ComEC/Rec2  31.37 
 
 
845 aa  107  8e-22  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.285892 
 
 
-
 
NC_010524  Lcho_2608  DNA internalization-related competence protein ComEC/Rec2  28.4 
 
 
833 aa  105  3e-21  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_003295  RSc1120  putative transporter DNA uptake transmembrane protein  31.29 
 
 
847 aa  102  2e-20  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0978754  normal  0.511509 
 
 
-
 
NC_009656  PSPA7_2177  DNA internalization-related competence protein ComEC/Rec2  32.45 
 
 
740 aa  101  4e-20  Pseudomonas aeruginosa PA7  Bacteria  normal  0.589266  n/a   
 
 
-
 
NC_003910  CPS_2124  DNA internalization-related competence protein ComEC/Rec2  26.83 
 
 
860 aa  101  5e-20  Colwellia psychrerythraea 34H  Bacteria  normal  0.118158  n/a   
 
 
-
 
NC_007912  Sde_1702  DNA internalization-related competence protein ComEC/Rec2  24.83 
 
 
839 aa  101  6e-20  Saccharophagus degradans 2-40  Bacteria  normal  normal  0.0283023 
 
 
-
 
NC_007948  Bpro_3158  DNA internalization-related competence protein ComEC/Rec2  30.7 
 
 
860 aa  100  8e-20  Polaromonas sp. JS666  Bacteria  normal  0.0990853  normal  0.446106 
 
 
-
 
NC_008752  Aave_1352  DNA internalization-related competence protein ComEC/Rec2  36.21 
 
 
948 aa  100  1e-19  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0141053 
 
 
-
 
NC_010501  PputW619_1508  DNA internalization-related competence protein ComEC/Rec2  29.32 
 
 
737 aa  98.2  4e-19  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_007799  ECH_0435  ComEC/Rec2-related protein  25.68 
 
 
674 aa  97.4  7e-19  Ehrlichia chaffeensis str. Arkansas  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1779  DNA internalization-related competence protein ComEC/Rec2  26.23 
 
 
762 aa  97.1  1e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1437  ComEC/Rec2-related protein  31.78 
 
 
750 aa  96.3  2e-18  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.715322 
 
 
-
 
NC_009439  Pmen_1611  DNA internalization-related competence protein ComEC/Rec2  33.08 
 
 
741 aa  95.5  3e-18  Pseudomonas mendocina ymp  Bacteria  normal  0.804409  normal  0.12587 
 
 
-
 
NC_010508  Bcenmc03_2129  DNA internalization-related competence protein ComEC/Rec2  29.54 
 
 
829 aa  93.6  1e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.326593  normal  0.0900672 
 
 
-
 
NC_007510  Bcep18194_A5417  DNA internalization-related competence protein ComEC/Rec2  28.84 
 
 
830 aa  93.2  1e-17  Burkholderia sp. 383  Bacteria  normal  0.560238  normal 
 
 
-
 
NC_009512  Pput_3817  DNA internalization-related competence protein ComEC/Rec2  32.67 
 
 
738 aa  93.2  1e-17  Pseudomonas putida F1  Bacteria  normal  0.925349  normal 
 
 
-
 
NC_002977  MCA2627  DNA internalization-related competence protein ComEC/Rec2  29.97 
 
 
801 aa  92.4  2e-17  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5966  DNA internalization-related competence protein ComEC/Rec2  29.27 
 
 
829 aa  92  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.814009  n/a   
 
 
-
 
NC_008542  Bcen2424_2111  DNA internalization-related competence protein ComEC/Rec2  29.27 
 
 
829 aa  92  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  0.261797  n/a   
 
 
-
 
NC_002947  PP_1897  DNA internalization-related competence protein ComEC/Rec2  38.43 
 
 
737 aa  91.7  4e-17  Pseudomonas putida KT2440  Bacteria  normal  hitchhiker  0.000116946 
 
 
-
 
NC_008740  Maqu_1744  DNA internalization-related competence protein ComEC/Rec2  26.33 
 
 
806 aa  90.5  9e-17  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00591  DNA internalization-related competence protein ComEC/Rec2  27.14 
 
 
776 aa  89.7  2e-16  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.0903265  n/a   
 
 
-
 
NC_009523  RoseRS_1609  ComEC/Rec2-related protein  29.75 
 
 
546 aa  89  2e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_5080  DNA internalization-related competence protein ComEC/Rec2  31.46 
 
 
832 aa  88.2  5e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.411729  normal  0.0251813 
 
 
-
 
NC_010322  PputGB1_1473  DNA internalization-related competence protein ComEC/Rec2  31.02 
 
 
738 aa  86.3  0.000000000000002  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_010644  Emin_1470  ComEC/Rec2-related protein  25.79 
 
 
609 aa  85.5  0.000000000000003  Elusimicrobium minutum Pei191  Bacteria  normal  normal 
 
 
-
 
NC_008463  PA14_25480  putative competence protein  29.98 
 
 
741 aa  85.1  0.000000000000004  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_1336  DNA internalization-related competence protein ComEC/Rec2  25.42 
 
 
765 aa  83.6  0.00000000000001  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.62013 
 
 
-
 
NC_002978  WD1160  ComEC/Rec2 family protein  26.07 
 
 
720 aa  82.4  0.00000000000003  Wolbachia endosymbiont of Drosophila melanogaster  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_0606  DNA internalization-related competence protein ComEC/Rec2  22.64 
 
 
778 aa  82.4  0.00000000000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007354  Ecaj_0586  ComEC/Rec2-related protein  28.09 
 
 
672 aa  81.6  0.00000000000004  Ehrlichia canis str. Jake  Bacteria  normal  0.330536  n/a   
 
 
-
 
NC_010424  Daud_2070  DNA internalization-related competence protein ComEC/Rec2  30.65 
 
 
818 aa  81.3  0.00000000000006  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2585  DNA internalization-related competence protein ComEC/Rec2  26.33 
 
 
773 aa  79  0.0000000000002  Shewanella sp. ANA-3  Bacteria  normal  normal  0.13038 
 
 
-
 
NC_008309  HS_1022  recombination protein 2  26.91 
 
 
808 aa  79  0.0000000000003  Haemophilus somnus 129PT  Bacteria  normal  0.949854  n/a   
 
 
-
 
NC_009972  Haur_3646  ComEC/Rec2-related protein  28.26 
 
 
493 aa  78.2  0.0000000000005  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0767  DNA internalization-related competence protein ComEC/Rec2  32.47 
 
 
840 aa  77.4  0.0000000000008  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011313  VSAL_II0736  putative competence-related protein  31.36 
 
 
768 aa  77.4  0.0000000000008  Aliivibrio salmonicida LFI1238  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1134  ComEC/Rec2-related protein  24.72 
 
 
672 aa  77  0.000000000001  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_012560  Avin_14730  DNA internalization-related competence protein ComA  35.89 
 
 
711 aa  76.3  0.000000000002  Azotobacter vinelandii DJ  Bacteria  normal  0.0603479  n/a   
 
 
-
 
NC_007969  Pcryo_0791  ComEC/Rec2-related protein  28.23 
 
 
1006 aa  75.9  0.000000000002  Psychrobacter cryohalolentis K5  Bacteria  normal  0.52274  normal 
 
 
-
 
NC_013385  Adeg_1483  DNA internalization-related competence protein ComEC/Rec2  26.77 
 
 
791 aa  75.9  0.000000000002  Ammonifex degensii KC4  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1011  hypothetical protein  27.41 
 
 
754 aa  75.9  0.000000000002  Escherichia coli E24377A  Bacteria  hitchhiker  0.00460048  n/a   
 
 
-
 
NC_009052  Sbal_1682  DNA internalization-related competence protein ComEC/Rec2  31.73 
 
 
783 aa  76.3  0.000000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_2040  hypothetical protein  29.56 
 
 
763 aa  76.3  0.000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2675  DNA internalization-related competence protein ComEC/Rec2  31.27 
 
 
783 aa  75.9  0.000000000003  Shewanella baltica OS223  Bacteria  normal  0.923098  normal  0.0587505 
 
 
-
 
CP001509  ECD_00917  conserved inner membrane protein  27.88 
 
 
754 aa  75.1  0.000000000004  Escherichia coli BL21(DE3)  Bacteria  normal  0.578469  n/a   
 
 
-
 
CP001637  EcDH1_2730  DNA internalization-related competence protein ComEC/Rec2  27.88 
 
 
754 aa  75.1  0.000000000004  Escherichia coli DH1  Bacteria  normal  0.170872  n/a   
 
 
-
 
NC_012892  B21_00924  hypothetical protein  27.88 
 
 
754 aa  75.1  0.000000000004  Escherichia coli BL21  Bacteria  normal  0.630751  n/a   
 
 
-
 
NC_008609  Ppro_1379  DNA internalization-related competence protein ComEC/Rec2  28.53 
 
 
808 aa  75.5  0.000000000004  Pelobacter propionicus DSM 2379  Bacteria  normal  0.011467  n/a   
 
 
-
 
NC_010468  EcolC_2683  hypothetical protein  27.88 
 
 
754 aa  75.1  0.000000000004  Escherichia coli ATCC 8739  Bacteria  normal  0.692344  normal  0.226957 
 
 
-
 
NC_009832  Spro_1711  hypothetical protein  29.77 
 
 
737 aa  74.7  0.000000000005  Serratia proteamaculans 568  Bacteria  normal  0.0805358  normal 
 
 
-
 
NC_007963  Csal_1585  DNA internalization-related competence protein ComEC/Rec2  29.64 
 
 
758 aa  74.7  0.000000000005  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.882312  n/a   
 
 
-
 
NC_008322  Shewmr7_2493  DNA internalization-related competence protein ComEC/Rec2  26.63 
 
 
773 aa  74.7  0.000000000005  Shewanella sp. MR-7  Bacteria  normal  0.105792  normal  0.137051 
 
 
-
 
NC_009901  Spea_1769  DNA internalization-related competence protein ComEC/Rec2  24.94 
 
 
812 aa  74.3  0.000000000007  Shewanella pealeana ATCC 700345  Bacteria  normal  0.479237  n/a   
 
 
-
 
NC_008321  Shewmr4_2423  DNA internalization-related competence protein ComEC/Rec2  25.82 
 
 
773 aa  74.3  0.000000000008  Shewanella sp. MR-4  Bacteria  normal  normal  0.395966 
 
 
-
 
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