| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_3646 |
|---|
| Symbol | |
|---|
| ID | 5735507 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 4585983 |
|---|
| End bp | 4587464 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641280795 |
|---|
| Product | ComEC/Rec2-related protein |
|---|
| Protein accession | YP_001546410 |
|---|
| Protein GI | 159900163 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0658] Predicted membrane metal-binding protein |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGACTTT GTGGTTTTAC TGCTGGCTGG CTGCTTGGGC TGTGGTTAAA TGATAGGCTA
CAAATAGCAT GGTATCTATA TTTTATGGCA TCAATAGCGA TTATTTTACT CATTATCTAT
ATCCGAAAAT CATGGCGGGT TATGCTGATA GCAATATATG CTGGTACTAT GCTAGGGGTA
GTACGAATGG CGGTCAGTCA AAATTCCTCA AATCTTGACG ATATTCGTCA ACAGATTGGC
ATGACAACTC GTTTAGAAGG AGTAATTGTC GGCCAGCCGC AATGGACTCC ACAGCAACAA
CGGGTGGTTT TAGCCGTCCA TGCTTATCAA GATAATCAGC AACGAGTTGC CACAACTGGC
AAGATTATGT TAACTCTTCC AGCCGAGCCA CCACGCAGTA ATGGCGAACG TTTGTTAGTC
AGCGGCACAA TCATCACGCC AACCGCTAGC CCAAATTTCG ATTATGCCGA CTATCTACGT
CGCCGCTCGA TTTATGCCAT GCTTGAGCCT GCAACCGTTG AACAAGCCTT GCCTGCAAAA
AATTCAGTCT ATCAACGCTT AATCGCGCTC AAACAGCGCT CGCAAACAAT CATCAACCAA
ACGTTGCCGC AACCGCAAGC AGCAGTTTTG GTCGGAATGT TGCTGGGAGT CAAAAGCAGC
GTGCCTCAAA CTGTGTGGGA TACCTTCAAT CGCACTGGGC TTTCGCATAT CTTAATCATC
TCAGGCTGGA ATATTACAAT TGTGGTGGCG GCGTTATTGG GTTTGGGCAA GGCCTTAAAG
CTTAGTCAAC GCCACGCCAC CATGGTGGCA ATTGGCGCAA TTGTGGTGTA TGTAGCCTTT
GTGGGAGCTA GCGGGGCTGT GATTCGCGCT GCCTTGATGG GCGCAATCGT GGCACTAGCC
CAGCCGCTTG GTCGCAAATC CGATGCTTGG GCGGCACTCG CGGCAGCAAC TTGGCTCATG
ACCCTGATCG ATCCGCACAC CTTATGGGAT TTAGGCTTTC AACTATCAGC TTTGGCCACG
GCGAGCTTGT TTGCTTGGGG CAAGCCAATT GAAGCTCAAT TGCGGCAGTG GCTGCGTTGG
CGCTGGCTCG AATGGATGAT CGAGCCATTG ACCGCAACAT TGGCCGCCCA AATTTGGACA
CTGCCGATCA TTCTGTATCA TTTTGGTAAT CTCTCGTTGA TTGCACCCGT CGCCAATGTA
CTGATTGTGC CAGTTGTGCC GTTGATTATG GCCAGCGGCG CAATGCTAGC ATGCTTGGGG
TTGTTTGGCC GTTGGTTAGC ATTGCTGGCC TTGCCAATCA CATGGGCGGC ATTAACTTGG
GTCGTTGAGG CCGCCGAATG GCTGGCCGAT TTATCTTGGG CAGCGGTCGA AATTCCTAGG
TTTGGCATGA GCTGGCTGGT GCTGGCGTAT GGCTTGAGCG TTGGGGCGAA GGCGTGGATG
GTTAACCACG AAGAACGCGA AGGACGCGAA GTAAGAATTT AA
|
|---|
| Protein sequence | MRLCGFTAGW LLGLWLNDRL QIAWYLYFMA SIAIILLIIY IRKSWRVMLI AIYAGTMLGV
VRMAVSQNSS NLDDIRQQIG MTTRLEGVIV GQPQWTPQQQ RVVLAVHAYQ DNQQRVATTG
KIMLTLPAEP PRSNGERLLV SGTIITPTAS PNFDYADYLR RRSIYAMLEP ATVEQALPAK
NSVYQRLIAL KQRSQTIINQ TLPQPQAAVL VGMLLGVKSS VPQTVWDTFN RTGLSHILII
SGWNITIVVA ALLGLGKALK LSQRHATMVA IGAIVVYVAF VGASGAVIRA ALMGAIVALA
QPLGRKSDAW AALAAATWLM TLIDPHTLWD LGFQLSALAT ASLFAWGKPI EAQLRQWLRW
RWLEWMIEPL TATLAAQIWT LPIILYHFGN LSLIAPVANV LIVPVVPLIM ASGAMLACLG
LFGRWLALLA LPITWAALTW VVEAAEWLAD LSWAAVEIPR FGMSWLVLAY GLSVGAKAWM
VNHEEREGRE VRI
|
|---|
| |