| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1022 |
|---|
| Symbol | rec2 |
|---|
| ID | 4240520 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | - |
|---|
| Start bp | 1128741 |
|---|
| End bp | 1131167 |
|---|
| Gene Length | 2427 bp |
|---|
| Protein Length | 808 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 638104583 |
|---|
| Product | recombination protein 2 |
|---|
| Protein accession | YP_719234 |
|---|
| Protein GI | 113461165 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
|---|
| TIGRFAM ID | [TIGR00360] ComEC/Rec2-related protein
[TIGR00361] DNA internalization-related competence protein ComEC/Rec2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.949854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA ACCTTGATCA TTACCTTTTT GTTATTTTAG CGAGTGCAAT GACATTGCTA
ATTACACCTC GTATTTTTTT ATTGAATTGG CAATGGATAT TGATCTTATG TCTTGTTCTT
GGGTTAGGAT ATATTGGTGT CAAAGCAGTA TTTTTTCGCT GTGTTCTAAA GCTATTTTTC
ATTTTTGTTC TTGGGGTGGG ATTTTTTCAT TATCAAGCAT TAAACTTGTT GGAACAAAGT
GAGCATATTA CCCGCTTACC TAAAAAAGTA CAAACTAACG TTAAAATAGC TGAAATTATT
CAGCAGAAAG ACTATCAAGC AGTGATCGCA GAAGGAAATT TCACCTCATC TTTGCCAACA
CAGCGAATTT ATTTAAATTG GCGTACTGAG CAAGAAGTTC AAGTTGGTGA AATTTGGCAA
GTAAATATGC ACATTCGTCC GATTTCTTCT CGATTAAATA TAGGAGGATT TGATCGTCAA
ACCTGGTATT TAGCAAAAGA AATTACAGCT TATGCCACAG TAAAAAGTGC GGTGAAAATT
GGTGAGGATT TTTCTTGGCG AGCTACTCGA CTGAATCAAG CTTTACAACA AACTTCCAAT
TTAGTTTCAC AAGGTTTATT GCTTGCATTG GGTTTTGGTG AAAGAGCCTG GCTAGACAAG
GAATTATGGC AACTTTATCA ACAAACCAAT ACCGCACATT TAATTGCAAT TTCAGGGTTG
CATATTGGTT TAGCTATGTT CATCGGTTTT ACATTAGGGC GAGCTATTCA ATTATTATTC
CCTACTCGTT ATATTGAACC TTATTTTCCT TTAATATTAG GGATTTTTTT AGCATTCTGT
TATGCAGAAT TAGCGGGATT TTCAATTCCT ACTTTTCGTG CGATTGTCGC TTTATTTATA
GTTTGTTTGT GTCGTATATG TCGAGTTTCC TATAATGTTT GGCAACTATT TTTGCGGGTT
ATTTGTGTTT TACTGATACT TAATCCATTT ATGTTATTGT CAGCCAGTTT TTGGCTATCA
ATCGGAGCGG TAGGTTGTTT GATCATGTGG TATCAATGGA TACCGCTAAA TTTATTTTTA
TGGAAAGAAA AGCCTTTGGC ACAATCTTCC TTGAAAAAAG TGCGGTATTT TATCGGTCTT
TTTCATTTGC AATTTGGGCT TTTGTGGTTT TTTACACCTA TCCAACTCTT AATTTTTAAT
GGTATCGCCT TAAATGGATT TTGGGCTAAT TTATTATTGT TGCCTTTGTT CAGTTTTTTG
TTAGTTCCAC TTATTCTTTT TGCTGTACTG ACGGAAGGTG CGTTAAATAG TTGGAATATA
GCTGATCAGC TTGCTATATG GATCAATCAA TTGTTAAAGC TGTTACCAAA TCAGTGGATC
AATATTTCTC TTGCAGAAAG CTATTTTATT TCAGCTATAT TAGCTTTGCT CTTCACCTTA
TGCTGTAAAT GCATTATTAA GTGTTCAACC GACGATGATT TATCTTTATT GAGAAAAGTT
AGAAAAAAAA GTTTTTACCC TATACGGTTG AATTTTTCGG ACGGTTTTTC ACATAAAAAA
TATCAATATG GTATGGTGGT CAGTTCAGCT ATGTCTGTTA TTTTTTTATG TCTGTGGTTT
TTTTCGCTAT ATGAACAAGG GCGATTAAAA AACACACAAT GGCAATTTGA TACTCTAGAT
GTTGGTCAAG GATTGGCAAG TTTATTGGTA AAAAATCAAC ATGGAATTTT GTATGATACG
GGAGCAAGCT GGAAAAATGG TAGTATGGCA AAAATTGAGA TTATTCCTTA TCTAAGAAGA
CAGGGTATTA TTCTTGATAA AGTTATATTA AGTCATGATG ATAATGATCA TGCAGGTGGA
GTAAAAGATA TTTTCCAAGC TTATCCGAAT GCTGAGTTTA TCAGTCCCTC ATTAAAAAAG
TACGAGAATT CTCCAGAAAA TAGACCGCAT ATTGCTTGTC AAAAAGGAAA AATATGGCAT
TGGCAAGGGT TATATATTGA AGCCTTATCG CCAAGTAAAA TTGTGATGAG AGCCAATAAT
CCGGATTCTT GTGTGCTGAT AATTTCAGAT GGACAGCATA AAGTATTATT AACAGGAGAT
GCTGATGTGG CGACTGAATA TAAAATTTTG TCTGACTTGG GTAAGATTGA TGTGTTACAG
GTCGGACATC ATGGTAGTAA AACGTCAACC GGTGAGAAAT TACTACAGCA TATTCAGCCT
AAAATTGCTT TAATTTCCAG TGGACGTTGG AATCCTTGGG GATTTCCGCA TCAAGATGTC
GTCAAACGCT TAAATGCGGT TGAAAGTGCG GTCTATAATA CGGCCATTTC CGGTCAAATT
CGTTTAATAT TCAAAGGAAA AGATATTCAA ATTCAAACCG CAAGGACAGA GTTTAGCCCT
TGGTATAGAG GATTAATTGG CTTGTAA
|
|---|
| Protein sequence | MKFNLDHYLF VILASAMTLL ITPRIFLLNW QWILILCLVL GLGYIGVKAV FFRCVLKLFF
IFVLGVGFFH YQALNLLEQS EHITRLPKKV QTNVKIAEII QQKDYQAVIA EGNFTSSLPT
QRIYLNWRTE QEVQVGEIWQ VNMHIRPISS RLNIGGFDRQ TWYLAKEITA YATVKSAVKI
GEDFSWRATR LNQALQQTSN LVSQGLLLAL GFGERAWLDK ELWQLYQQTN TAHLIAISGL
HIGLAMFIGF TLGRAIQLLF PTRYIEPYFP LILGIFLAFC YAELAGFSIP TFRAIVALFI
VCLCRICRVS YNVWQLFLRV ICVLLILNPF MLLSASFWLS IGAVGCLIMW YQWIPLNLFL
WKEKPLAQSS LKKVRYFIGL FHLQFGLLWF FTPIQLLIFN GIALNGFWAN LLLLPLFSFL
LVPLILFAVL TEGALNSWNI ADQLAIWINQ LLKLLPNQWI NISLAESYFI SAILALLFTL
CCKCIIKCST DDDLSLLRKV RKKSFYPIRL NFSDGFSHKK YQYGMVVSSA MSVIFLCLWF
FSLYEQGRLK NTQWQFDTLD VGQGLASLLV KNQHGILYDT GASWKNGSMA KIEIIPYLRR
QGIILDKVIL SHDDNDHAGG VKDIFQAYPN AEFISPSLKK YENSPENRPH IACQKGKIWH
WQGLYIEALS PSKIVMRANN PDSCVLIISD GQHKVLLTGD ADVATEYKIL SDLGKIDVLQ
VGHHGSKTST GEKLLQHIQP KIALISSGRW NPWGFPHQDV VKRLNAVESA VYNTAISGQI
RLIFKGKDIQ IQTARTEFSP WYRGLIGL
|
|---|
| |