Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | ECD_00917 |
Symbol | ycaI |
ID | 0 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Escherichia coli BL21(DE3) |
Kingdom | Bacteria |
Replicon accession | CP001509 |
Strand | + |
Start bp | 969410 |
End bp | 971674 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | conserved inner membrane protein |
Protein accession | ACT42812 |
Protein GI | 253977142 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.578469 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAA CGACAGTCGG TGTATGCATA ATTAGCGGAA TTTTTCCGTT GCTGATTTTG CCCCAATTGC CTGGGACATT AACCCTTGCG TTTCTGACTC TCTTCGCCTG CGTACTGGCA TTTATCCCTG TTAAAACCGT CCGTTATATC GCGCTGACGT TGCTGTTTTT CGTTTGGGGC ATATTATCAG CAAAGCAAAT TTTGTGGGCA GGAGAAACCT TAACTGGCGC GACGCAGGAT GCAATTGTTG AGATCACTGC AACTGACGGC ATGACCACTC ATTACGGTCA AATTACTCAT CTACAAGGTC GACGTATATT CCCTGCGTCA GGTCTCGTGA TGTATGGCGA ATATCTTCCG CAAGCGGTTT GTGCTGGACA ACAATGGTCA ATGAAACTCA AAGTTCGTGC AGTTCATGGC CAACTTAATG ATGGCGGCTT TGATAGCCAG CGTTATGCCA TTGCCCAGCA TCAGCCGCTC ACCGGCCGTT TTCTGCAGGC AAGTGTCATT GAACCGAATT GTAGCCTGCG TGCACAGTAT CTGGCGTCAC TACAAACAAC GCTGCAACCC TATCCGTGGA ATGCGGTTAT TCTTGGTTTA GGTATGGGGG AACGGTTATC CGTCCCCAAA GAAATCAAAA ATATCATGCG CGATACTGGA ACGGCGCATT TAATGGCGAT ATCGGGATTG CACATCGCTT TTGCGGCGTT GCTGGCTGCC GGACTCATTC GCAGTGGACA AATTTTTCTG CCTGGGCGCT GGATCCACTG GCAAATACCA TTAATTGGCG GAATCTGCTG TGCTGCTTTT TATGCCTGGT TGACGGGAAT GCAACCTCCT GCATTGCGTA CCATGGTGGC GCTTGCTACG TGGGGAATGC TTAAGTTAAG TGGGCGACAG TGGAGTGGCT GGGATGTATG GATATGTTGT CTGGCGGCAA TTTTGCTGAT GGATCCTGTT GCCATTCTCT CGCAAAGTTT ATGGCTCTCT GCCGCTGCGG TCGCGGCATT GATATTTTGG TATCAGTGGT TTCCCTGTCC TGAGTGGCAA CTGCCGCCGG TATTGCGTGC AGTTGTTTCC CTCATCCATC TGCAACTGGG AATCACACTT CTGCTTATGC CCGTGCAAAT CGTCATATTT CATGGCATTA GTCTGACCTC GTTTATTGCA AATCTATTAG CTATTCCCTT GGTGACATTT ATCACGGTTC CGTTGATCCT CGCCGCGATG GTTGTGCATT TAAGCGGGCC GTTAATCCTG GAGCAAGGGT TATGGTTTCT TGCCGACCGG TCTTTGGCTT TACTTTTCTG GGGGTTAAAG AGTTTGCCGG AAGGGTGGAT CAACATTGCT GAATGTTGGC AATGGCTATC ATTTTCCCCA TGGTTCTTAC TGGTGGTATG GCGATTAAAC GCCTGGCGAA CGTTGCCAGC AATGTGTGTG GCTGGAGGCT TGCTGATGTG CTGGCCGCTG TGGCAAAAAC CTCGACCTGA CGAGTGGCAG CTGTACATGC TTGATGTCGG GCAAGGGCTG GCAATGGTGA TAGCCAGAAA CGGCAAAGCG ATTCTCTATG ACACAGGACT GGCCTGGCCT GAAGGGGATA GTGGGCAACA ACTGATTATC CCCTGGCTCC ACTGGCATAA TCTTGAACCG GAAGGCGTTA TTCTGAGCCA TGAACATCTG GATCACCGGG GAGGGCTGGA TTCAATATTG CATATATGGC CGATGTTATG GATCAGAAGT CCGTTAAACT GGGAACATCA TCAGCCCTGT GTGCGTGGCG AAGCGTGGCA ATGGCAAGGA TTGCGTTTCA GCGCGCACTG GCCTTTACAA GGTAGCAACG ATAAAGGAAA TAACCATTCC TGTGTGGTTA AGGTTGATGA CGGGACGAAT AGCATTCTTC TAACCGGTGA TATTGAAGCC CCAGCTGAAC AAAAGATGCT AAGCCGTTAC TGGCAGCAAG TGCAGGCAAC ATTGCTTCAG GTACCTCACC ATGGCAGTAA TACCTCATCA TCGTTGCCAT TAATTCAGCG AGTGAATGGA AAAGTGGCAC TCGCATCGGC ATCGCGCTAT AACGCATGGC GACTGCCCTC TAACAAAGTT AAGCATCGCT ATCAACTGCA AGGATATCAA TGGATTGATA CTCCACATCA AGGTCAAACA ACGGTCAATT TTTCAGCGCA AGGCTGGCGG ATTAGCAGCC TCAGGGAGCA AATTTTACCT CGTTGGTATC ATCAGTGGTT TGGCGTGCCA GTGGATAACG GGTAG
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Protein sequence | MKITTVGVCI ISGIFPLLIL PQLPGTLTLA FLTLFACVLA FIPVKTVRYI ALTLLFFVWG ILSAKQILWA GETLTGATQD AIVEITATDG MTTHYGQITH LQGRRIFPAS GLVMYGEYLP QAVCAGQQWS MKLKVRAVHG QLNDGGFDSQ RYAIAQHQPL TGRFLQASVI EPNCSLRAQY LASLQTTLQP YPWNAVILGL GMGERLSVPK EIKNIMRDTG TAHLMAISGL HIAFAALLAA GLIRSGQIFL PGRWIHWQIP LIGGICCAAF YAWLTGMQPP ALRTMVALAT WGMLKLSGRQ WSGWDVWICC LAAILLMDPV AILSQSLWLS AAAVAALIFW YQWFPCPEWQ LPPVLRAVVS LIHLQLGITL LLMPVQIVIF HGISLTSFIA NLLAIPLVTF ITVPLILAAM VVHLSGPLIL EQGLWFLADR SLALLFWGLK SLPEGWINIA ECWQWLSFSP WFLLVVWRLN AWRTLPAMCV AGGLLMCWPL WQKPRPDEWQ LYMLDVGQGL AMVIARNGKA ILYDTGLAWP EGDSGQQLII PWLHWHNLEP EGVILSHEHL DHRGGLDSIL HIWPMLWIRS PLNWEHHQPC VRGEAWQWQG LRFSAHWPLQ GSNDKGNNHS CVVKVDDGTN SILLTGDIEA PAEQKMLSRY WQQVQATLLQ VPHHGSNTSS SLPLIQRVNG KVALASASRY NAWRLPSNKV KHRYQLQGYQ WIDTPHQGQT TVNFSAQGWR ISSLREQILP RWYHQWFGVP VDNG
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