| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | ECD_00917 |
|---|
| Symbol | ycaI |
|---|
| ID | 0 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli BL21(DE3) |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | CP001509 |
|---|
| Strand | + |
|---|
| Start bp | 969410 |
|---|
| End bp | 971674 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | conserved inner membrane protein |
|---|
| Protein accession | ACT42812 |
|---|
| Protein GI | 253977142 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.578469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA CGACAGTCGG TGTATGCATA ATTAGCGGAA TTTTTCCGTT GCTGATTTTG
CCCCAATTGC CTGGGACATT AACCCTTGCG TTTCTGACTC TCTTCGCCTG CGTACTGGCA
TTTATCCCTG TTAAAACCGT CCGTTATATC GCGCTGACGT TGCTGTTTTT CGTTTGGGGC
ATATTATCAG CAAAGCAAAT TTTGTGGGCA GGAGAAACCT TAACTGGCGC GACGCAGGAT
GCAATTGTTG AGATCACTGC AACTGACGGC ATGACCACTC ATTACGGTCA AATTACTCAT
CTACAAGGTC GACGTATATT CCCTGCGTCA GGTCTCGTGA TGTATGGCGA ATATCTTCCG
CAAGCGGTTT GTGCTGGACA ACAATGGTCA ATGAAACTCA AAGTTCGTGC AGTTCATGGC
CAACTTAATG ATGGCGGCTT TGATAGCCAG CGTTATGCCA TTGCCCAGCA TCAGCCGCTC
ACCGGCCGTT TTCTGCAGGC AAGTGTCATT GAACCGAATT GTAGCCTGCG TGCACAGTAT
CTGGCGTCAC TACAAACAAC GCTGCAACCC TATCCGTGGA ATGCGGTTAT TCTTGGTTTA
GGTATGGGGG AACGGTTATC CGTCCCCAAA GAAATCAAAA ATATCATGCG CGATACTGGA
ACGGCGCATT TAATGGCGAT ATCGGGATTG CACATCGCTT TTGCGGCGTT GCTGGCTGCC
GGACTCATTC GCAGTGGACA AATTTTTCTG CCTGGGCGCT GGATCCACTG GCAAATACCA
TTAATTGGCG GAATCTGCTG TGCTGCTTTT TATGCCTGGT TGACGGGAAT GCAACCTCCT
GCATTGCGTA CCATGGTGGC GCTTGCTACG TGGGGAATGC TTAAGTTAAG TGGGCGACAG
TGGAGTGGCT GGGATGTATG GATATGTTGT CTGGCGGCAA TTTTGCTGAT GGATCCTGTT
GCCATTCTCT CGCAAAGTTT ATGGCTCTCT GCCGCTGCGG TCGCGGCATT GATATTTTGG
TATCAGTGGT TTCCCTGTCC TGAGTGGCAA CTGCCGCCGG TATTGCGTGC AGTTGTTTCC
CTCATCCATC TGCAACTGGG AATCACACTT CTGCTTATGC CCGTGCAAAT CGTCATATTT
CATGGCATTA GTCTGACCTC GTTTATTGCA AATCTATTAG CTATTCCCTT GGTGACATTT
ATCACGGTTC CGTTGATCCT CGCCGCGATG GTTGTGCATT TAAGCGGGCC GTTAATCCTG
GAGCAAGGGT TATGGTTTCT TGCCGACCGG TCTTTGGCTT TACTTTTCTG GGGGTTAAAG
AGTTTGCCGG AAGGGTGGAT CAACATTGCT GAATGTTGGC AATGGCTATC ATTTTCCCCA
TGGTTCTTAC TGGTGGTATG GCGATTAAAC GCCTGGCGAA CGTTGCCAGC AATGTGTGTG
GCTGGAGGCT TGCTGATGTG CTGGCCGCTG TGGCAAAAAC CTCGACCTGA CGAGTGGCAG
CTGTACATGC TTGATGTCGG GCAAGGGCTG GCAATGGTGA TAGCCAGAAA CGGCAAAGCG
ATTCTCTATG ACACAGGACT GGCCTGGCCT GAAGGGGATA GTGGGCAACA ACTGATTATC
CCCTGGCTCC ACTGGCATAA TCTTGAACCG GAAGGCGTTA TTCTGAGCCA TGAACATCTG
GATCACCGGG GAGGGCTGGA TTCAATATTG CATATATGGC CGATGTTATG GATCAGAAGT
CCGTTAAACT GGGAACATCA TCAGCCCTGT GTGCGTGGCG AAGCGTGGCA ATGGCAAGGA
TTGCGTTTCA GCGCGCACTG GCCTTTACAA GGTAGCAACG ATAAAGGAAA TAACCATTCC
TGTGTGGTTA AGGTTGATGA CGGGACGAAT AGCATTCTTC TAACCGGTGA TATTGAAGCC
CCAGCTGAAC AAAAGATGCT AAGCCGTTAC TGGCAGCAAG TGCAGGCAAC ATTGCTTCAG
GTACCTCACC ATGGCAGTAA TACCTCATCA TCGTTGCCAT TAATTCAGCG AGTGAATGGA
AAAGTGGCAC TCGCATCGGC ATCGCGCTAT AACGCATGGC GACTGCCCTC TAACAAAGTT
AAGCATCGCT ATCAACTGCA AGGATATCAA TGGATTGATA CTCCACATCA AGGTCAAACA
ACGGTCAATT TTTCAGCGCA AGGCTGGCGG ATTAGCAGCC TCAGGGAGCA AATTTTACCT
CGTTGGTATC ATCAGTGGTT TGGCGTGCCA GTGGATAACG GGTAG
|
|---|
| Protein sequence | MKITTVGVCI ISGIFPLLIL PQLPGTLTLA FLTLFACVLA FIPVKTVRYI ALTLLFFVWG
ILSAKQILWA GETLTGATQD AIVEITATDG MTTHYGQITH LQGRRIFPAS GLVMYGEYLP
QAVCAGQQWS MKLKVRAVHG QLNDGGFDSQ RYAIAQHQPL TGRFLQASVI EPNCSLRAQY
LASLQTTLQP YPWNAVILGL GMGERLSVPK EIKNIMRDTG TAHLMAISGL HIAFAALLAA
GLIRSGQIFL PGRWIHWQIP LIGGICCAAF YAWLTGMQPP ALRTMVALAT WGMLKLSGRQ
WSGWDVWICC LAAILLMDPV AILSQSLWLS AAAVAALIFW YQWFPCPEWQ LPPVLRAVVS
LIHLQLGITL LLMPVQIVIF HGISLTSFIA NLLAIPLVTF ITVPLILAAM VVHLSGPLIL
EQGLWFLADR SLALLFWGLK SLPEGWINIA ECWQWLSFSP WFLLVVWRLN AWRTLPAMCV
AGGLLMCWPL WQKPRPDEWQ LYMLDVGQGL AMVIARNGKA ILYDTGLAWP EGDSGQQLII
PWLHWHNLEP EGVILSHEHL DHRGGLDSIL HIWPMLWIRS PLNWEHHQPC VRGEAWQWQG
LRFSAHWPLQ GSNDKGNNHS CVVKVDDGTN SILLTGDIEA PAEQKMLSRY WQQVQATLLQ
VPHHGSNTSS SLPLIQRVNG KVALASASRY NAWRLPSNKV KHRYQLQGYQ WIDTPHQGQT
TVNFSAQGWR ISSLREQILP RWYHQWFGVP VDNG
|
|---|
| |