More than 300 homologs were found in PanDaTox collection
for query gene Swit_2724 on replicon NC_009511
Organism: Sphingomonas wittichii RW1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  100 
 
 
341 aa  686    Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
367 aa  352  7e-96  Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  48.51 
 
 
362 aa  312  5.999999999999999e-84  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0771  methyl-accepting chemotaxis sensory transducer  49.85 
 
 
409 aa  311  1e-83  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0082  chemotaxis sensory transducer  48.34 
 
 
359 aa  310  2e-83  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  47.15 
 
 
362 aa  309  4e-83  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_007643  Rru_A0081  chemotaxis sensory transducer  47.02 
 
 
362 aa  306  3e-82  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  48.78 
 
 
345 aa  306  4.0000000000000004e-82  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  48.15 
 
 
361 aa  304  2.0000000000000002e-81  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_4260  methyl-accepting chemotaxis sensory transducer  47.8 
 
 
352 aa  299  5e-80  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3892  putative methyl-accepting chemotaxis protein  47.48 
 
 
352 aa  297  2e-79  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.344749 
 
 
-
 
NC_010505  Mrad2831_5068  methyl-accepting chemotaxis sensory transducer  49.24 
 
 
371 aa  296  5e-79  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0531667 
 
 
-
 
NC_007925  RPC_4930  methyl-accepting chemotaxis sensory transducer  47.13 
 
 
362 aa  293  4e-78  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226636 
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  44.74 
 
 
359 aa  285  7e-76  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  45.48 
 
 
351 aa  282  5.000000000000001e-75  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2252  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
364 aa  278  8e-74  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1975  chemotaxis sensory transducer  44.35 
 
 
364 aa  278  9e-74  Methylobacterium extorquens PA1  Bacteria  normal  0.129929  normal 
 
 
-
 
NC_010725  Mpop_1930  methyl-accepting chemotaxis sensory transducer  45.21 
 
 
366 aa  275  6e-73  Methylobacterium populi BJ001  Bacteria  normal  0.702252  normal  0.0243578 
 
 
-
 
NC_011989  Avi_1377  methyl-accepting chemotaxis protein  40.38 
 
 
370 aa  243  5e-63  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_0931  methyl-accepting chemotaxis sensory transducer  41.85 
 
 
368 aa  241  1e-62  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.219476  normal  0.828358 
 
 
-
 
NC_012850  Rleg_1080  methyl-accepting chemotaxis sensory transducer  42.04 
 
 
368 aa  240  2.9999999999999997e-62  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  32.93 
 
 
377 aa  171  1e-41  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  26.22 
 
 
334 aa  109  6e-23  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1760  CheW protein  35.71 
 
 
875 aa  103  4e-21  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1071  CheW protein  32.22 
 
 
891 aa  89.4  9e-17  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1709  hypothetical protein  29.21 
 
 
668 aa  87  4e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_2145  hypothetical protein  30.05 
 
 
692 aa  75.5  0.000000000001  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0470  CheW protein  27.43 
 
 
848 aa  73.6  0.000000000005  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2970  CheW protein  32.8 
 
 
841 aa  72.4  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007298  Daro_1140  chemotaxis sensory transducer  27.39 
 
 
418 aa  62  0.00000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0865  methyl-accepting chemotaxis sensory transducer  52.86 
 
 
712 aa  62  0.00000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.163995 
 
 
-
 
NC_009616  Tmel_1867  methyl-accepting chemotaxis sensory transducer  41.46 
 
 
279 aa  62.4  0.00000001  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00249255  n/a   
 
 
-
 
NC_008825  Mpe_A2920  aerotaxis sensor receptor  39.81 
 
 
549 aa  61.2  0.00000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_2094  methyl-accepting chemotaxis sensory transducer  49.28 
 
 
511 aa  61.2  0.00000002  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_1641  methyl-accepting chemotaxis sensory transducer  46.05 
 
 
518 aa  60.8  0.00000003  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.901147  normal 
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  39.25 
 
 
546 aa  60.1  0.00000005  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_009485  BBta_0533  methyl-accepting chemotaxis protein (MCP)  31.21 
 
 
712 aa  60.1  0.00000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.566253  normal  0.595703 
 
 
-
 
NC_011368  Rleg2_4686  methyl-accepting chemotaxis sensory transducer  34.29 
 
 
601 aa  60.1  0.00000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.115608  normal 
 
 
-
 
NC_011004  Rpal_2025  methyl-accepting chemotaxis sensory transducer  48.68 
 
 
688 aa  60.1  0.00000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.0110809  n/a   
 
 
-
 
NC_007520  Tcr_0361  methyl-accepting chemotaxis sensory transducer  43.66 
 
 
601 aa  59.7  0.00000007  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2726  methyl-accepting chemotaxis sensory transducer  50 
 
 
319 aa  59.3  0.00000008  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00330308  n/a   
 
 
-
 
NC_007778  RPB_3545  methyl-accepting chemotaxis sensory transducer  50.75 
 
 
689 aa  59.7  0.00000008  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.457552  normal  0.598514 
 
 
-
 
NC_007958  RPD_0065  chemotaxis sensory transducer  37.41 
 
 
688 aa  59.3  0.00000008  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.0714339 
 
 
-
 
NC_013522  Taci_0209  methyl-accepting chemotaxis sensory transducer  52.31 
 
 
574 aa  59.3  0.00000009  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.0000416646  n/a   
 
 
-
 
NC_007954  Sden_3066  chemotaxis sensory transducer  34.71 
 
 
488 aa  59.3  0.00000009  Shewanella denitrificans OS217  Bacteria  normal  0.301784  n/a   
 
 
-
 
NC_012912  Dd1591_3613  methyl-accepting chemotaxis sensory transducer  35.14 
 
 
530 aa  58.9  0.0000001  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1716  methyl-accepting chemotaxis sensory transducer  41.76 
 
 
564 aa  58.9  0.0000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0822312  normal  0.62395 
 
 
-
 
NC_013457  VEA_001368  methyl-accepting chemotaxis protein  34.27 
 
 
519 aa  58.9  0.0000001  Vibrio sp. Ex25  Bacteria  normal  0.237865  n/a   
 
 
-
 
NC_007802  Jann_3360  methyl-accepting chemotaxis sensory transducer  42.16 
 
 
648 aa  58.9  0.0000001  Jannaschia sp. CCS1  Bacteria  normal  0.59059  normal 
 
 
-
 
NC_008789  Hhal_0974  methyl-accepting chemotaxis sensory transducer  39.45 
 
 
532 aa  58.9  0.0000001  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0699  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
282 aa  58.2  0.0000002  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  44.83 
 
 
653 aa  58.2  0.0000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_2382  methyl-accepting chemotaxis sensory transducer  58 
 
 
871 aa  58.2  0.0000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.115192  n/a   
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  30.3 
 
 
394 aa  58.2  0.0000002  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1017  methyl-accepting chemotaxis protein  34.91 
 
 
438 aa  58.2  0.0000002  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_0164  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.35 
 
 
1123 aa  58.5  0.0000002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2901  methyl-accepting chemotaxis sensory transducer  54.24 
 
 
674 aa  58.2  0.0000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.14772  normal  0.22504 
 
 
-
 
NC_008228  Patl_2247  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  32.59 
 
 
511 aa  58.2  0.0000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_013201  Hmuk_3378  methyl-accepting chemotaxis sensory transducer  42.05 
 
 
517 aa  58.2  0.0000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  34.86 
 
 
796 aa  58.2  0.0000002  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_009636  Smed_1613  methyl-accepting chemotaxis sensory transducer  49.18 
 
 
603 aa  58.2  0.0000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.183078  normal  0.160096 
 
 
-
 
NC_009616  Tmel_0851  methyl-accepting chemotaxis sensory transducer  46.77 
 
 
765 aa  58.5  0.0000002  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1554  methyl-accepting chemotaxis protein  31.65 
 
 
684 aa  57.4  0.0000003  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3594  CheW protein  29.59 
 
 
946 aa  57.8  0.0000003  Delftia acidovorans SPH-1  Bacteria  normal  0.0170517  normal  0.147677 
 
 
-
 
NC_004578  PSPTO_1059  methyl-accepting chemotaxis protein  41 
 
 
629 aa  57.4  0.0000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_2743  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
442 aa  57.8  0.0000003  Marinomonas sp. MWYL1  Bacteria  normal  0.205923  normal 
 
 
-
 
NC_011989  Avi_1200  methyl-accepting chemotaxis protein  39.08 
 
 
728 aa  57.4  0.0000003  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_007355  Mbar_A0989  methyl-accepting chemotaxis protein  44.3 
 
 
689 aa  57.8  0.0000003  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_012848  Rleg_5069  methyl-accepting chemotaxis sensory transducer  33.77 
 
 
714 aa  57.8  0.0000003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.277036  normal 
 
 
-
 
NC_011126  HY04AAS1_0195  methyl-accepting chemotaxis sensory transducer  37.66 
 
 
121 aa  57.8  0.0000003  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.0102683  n/a   
 
 
-
 
NC_011830  Dhaf_2177  methyl-accepting chemotaxis sensory transducer  33.64 
 
 
493 aa  57.8  0.0000003  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.000457925  n/a   
 
 
-
 
NC_011899  Hore_20990  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
654 aa  57.8  0.0000003  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000706955  n/a   
 
 
-
 
NC_010001  Cphy_0493  methyl-accepting chemotaxis sensory transducer  47.54 
 
 
726 aa  57.8  0.0000003  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_3609  methyl-accepting chemotaxis sensory transducer  33.33 
 
 
596 aa  57.4  0.0000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2742  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
560 aa  57.4  0.0000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.429688 
 
 
-
 
NC_009718  Fnod_0355  methyl-accepting chemotaxis sensory transducer  39.74 
 
 
280 aa  57.4  0.0000003  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.271483  n/a   
 
 
-
 
NC_009439  Pmen_3139  methyl-accepting chemotaxis sensory transducer  39.83 
 
 
640 aa  57.4  0.0000003  Pseudomonas mendocina ymp  Bacteria  normal  0.753261  normal  0.0120166 
 
 
-
 
NC_011899  Hore_06690  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
534 aa  57.8  0.0000003  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1739  chemotaxis sensory transducer  41.11 
 
 
559 aa  57.8  0.0000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_3036  methyl-accepting chemotaxis sensory transducer  39.71 
 
 
570 aa  57.8  0.0000003  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_1867  chemotaxis sensory transducer  49.25 
 
 
714 aa  57.4  0.0000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.133032 
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  37 
 
 
485 aa  57.4  0.0000004  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_009485  BBta_0534  methyl-accepting chemotaxis protein (MCP)  43.9 
 
 
733 aa  57  0.0000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.627871  normal 
 
 
-
 
NC_009636  Smed_0305  methyl-accepting chemotaxis sensory transducer  41.77 
 
 
841 aa  57  0.0000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009135  MmarC5_1544  methyl-accepting chemotaxis sensory transducer  58.33 
 
 
731 aa  57.4  0.0000004  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_008786  Veis_2296  methyl-accepting chemotaxis sensory transducer  35.35 
 
 
584 aa  57.4  0.0000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.604223  normal  0.776041 
 
 
-
 
NC_007778  RPB_0889  methyl-accepting chemotaxis sensory transducer  40.4 
 
 
540 aa  57  0.0000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0120  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.21 
 
 
519 aa  57  0.0000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3112  putative methyl-accepting chemotaxis sensory transducer  39.08 
 
 
1029 aa  57.4  0.0000004  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2942  methyl-accepting chemotaxis sensory transducer  41.67 
 
 
1049 aa  57  0.0000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_4331  methyl-accepting chemotaxis sensory transducer  28.11 
 
 
628 aa  57.4  0.0000004  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_4691  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  54.24 
 
 
492 aa  57  0.0000004  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_2106  methyl-accepting chemotaxis sensory transducer  43.9 
 
 
380 aa  57  0.0000004  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_0994  chemotaxis sensory transducer  42.7 
 
 
656 aa  57  0.0000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.357708  normal 
 
 
-
 
NC_013457  VEA_000202  methyl-accepting chemotaxis protein  37.38 
 
 
476 aa  57  0.0000004  Vibrio sp. Ex25  Bacteria  normal  0.856149  n/a   
 
 
-
 
NC_010718  Nther_2579  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.97 
 
 
678 aa  57  0.0000004  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_0566  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
452 aa  57  0.0000004  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_013512  Sdel_1826  chemotaxis sensory transducer  30.25 
 
 
650 aa  57.4  0.0000004  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0942  putative methyl-accepting chemotaxis sensory transducer  42.5 
 
 
495 aa  57.4  0.0000004  Shewanella amazonensis SB2B  Bacteria  decreased coverage  0.000202207  normal 
 
 
-
 
NC_007925  RPC_1710  methyl-accepting chemotaxis sensory transducer  43.66 
 
 
449 aa  57  0.0000005  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.140977  normal  0.0321459 
 
 
-
 
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