Gene Hore_06690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_06690 
Symbol 
ID7312904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp726052 
End bp727656 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content33% 
IMG OID643611100 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002508421 
Protein GI220931513 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGACA GATGGATTAA AGGACTTTAT ACCATATTTG TTCCTTTAAT CATCACCGTT 
TTATATTTGA TATTAAGTAA TTGGAATTTA AGCAGGCTTT TACCGGTTCT TATTTATTGT
ATTATTTCCA TAACAGGTTA TTTTATATAT TCTGCTTTCA GAGGAAGTAG TTATAATATA
ATTGAAAGGA AACTAAAACA ATTAGCCCGG GGAAGCTTTC ATGTTAAATT TGAGGAAAAA
GGTTCCTTTA AAGGTATAAG TAGCTCTTTA AATAAGATAT TAAAAAGATT TCGCCATTTT
ATAGGTACTA CAGTTCAGTC ATCAGAAAAG GTCCTCAGGG CAACCAGGGA CATAAATAAG
GACCTTAAAT CAATCAAAAT GGCTTCAGAG AATATATCTA AAACCATGGA AAGCTTTTCA
GGAAACCTTA TTCAACAGAG TGAGAAGGCT GAAGATACTA ATAAGGAAAT GAAAAATTTA
CATAAATTTT CAGAAAAAGT TGTTGAATAT TCCCAGAACA CCCTTAATAG CTCCCGGAAA
ATGGATGAAA TAATTGAAAG TAATAGTGAA GATATCAGGG AAATTATAAA TATACTGGAT
AATAATGTAA ATAATTTCAG GAAATTATCC TCTGTTACCG GAAAATTAAG TGCACAGGCC
AACAATATAA GTGAAATAAC CAGTAAGGTT AACGAGATTG CAGCCCAGAC TAATTTACTT
GCATTAAATG CCAGCATTGA AGCTGCCAGA GCAGGTGAAT ACGGACGAGG GTTTGCTGTT
GTTGCCGATG AAATTAGGGA ACTGGCCGGA CAGGTAACTG GTTTTTCCGG AGAGATAGGT
GGCATTGTAA ATGATATTTT AGAAGCTATT AACCAGATTA AGGAAGAAAT TAATGAGCAT
GCGGCTGAAC TGGAAGATAA TCTTAATATA ATTAATAATG CAGAAGAAGC CCTGAAAAAA
ATGAAGAAAT CCTCTGAAAA AAATACAGCT ACATCTTTTG AAATAAAAAA TATAGCAATA
AAACAAAAAG AGATAGCTGA CTCTGTTTTA AAGAAGATAG ATAATATTTT AGAGACATCT
CAGGAAGCAG CTGCAGCGGT TGAGGAAATA TCGGCCAGTA CTCAGGAACA AAGTTCTTAT
TTAAATAATA CATATGATAA GATAGATAAC CTGACAGATG AAATTCAGAA TTTAAGTGTA
GAAACAAAAA CATTTATGAC CGGTTTTAAA TTAACAGAGT CAGAAGAAAA TATGCTAAAT
AATTGTTTTA AAATTATAAA AAACCTGGCC TCACCGGACC TCCTGGATGA TAATAATAGA
ACCAGGCAAA TATTAAAGAA AGTAACTGAA GAAAACAAAC AGTTTGATAT AATCTGTGTA
ATGAATAGAG AAGGGCTTAA TTTTTCATCG AGTATTGATG AAGAAGATAT GACCACTGAT
TATTCCCATC GAAGTTATTT TGTGAAAGCA ATTAATGGTA AAGACTATCG TTCCGAACCA
TATGTATCAC TGGATACAGA CGATTACTGT ATTGCAATAT CAACTCCGGT AAGAGATAAA
AACGGTGAGG TGATCGGGGT AGTAATGGCA GATGTTAAAA TATAA
 
Protein sequence
MKDRWIKGLY TIFVPLIITV LYLILSNWNL SRLLPVLIYC IISITGYFIY SAFRGSSYNI 
IERKLKQLAR GSFHVKFEEK GSFKGISSSL NKILKRFRHF IGTTVQSSEK VLRATRDINK
DLKSIKMASE NISKTMESFS GNLIQQSEKA EDTNKEMKNL HKFSEKVVEY SQNTLNSSRK
MDEIIESNSE DIREIINILD NNVNNFRKLS SVTGKLSAQA NNISEITSKV NEIAAQTNLL
ALNASIEAAR AGEYGRGFAV VADEIRELAG QVTGFSGEIG GIVNDILEAI NQIKEEINEH
AAELEDNLNI INNAEEALKK MKKSSEKNTA TSFEIKNIAI KQKEIADSVL KKIDNILETS
QEAAAAVEEI SASTQEQSSY LNNTYDKIDN LTDEIQNLSV ETKTFMTGFK LTESEENMLN
NCFKIIKNLA SPDLLDDNNR TRQILKKVTE ENKQFDIICV MNREGLNFSS SIDEEDMTTD
YSHRSYFVKA INGKDYRSEP YVSLDTDDYC IAISTPVRDK NGEVIGVVMA DVKI