More than 300 homologs were found in PanDaTox collection
for query gene Rru_A0081 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A0081  chemotaxis sensory transducer  100 
 
 
362 aa  733    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  85.04 
 
 
362 aa  620  1e-176  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0082  chemotaxis sensory transducer  68.33 
 
 
359 aa  491  9.999999999999999e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  53.64 
 
 
367 aa  357  1.9999999999999998e-97  Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  51.24 
 
 
362 aa  354  1e-96  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  52.03 
 
 
361 aa  348  1e-94  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  53.27 
 
 
359 aa  348  1e-94  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
NC_007925  RPC_4930  methyl-accepting chemotaxis sensory transducer  51.72 
 
 
362 aa  343  2.9999999999999997e-93  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226636 
 
 
-
 
NC_010505  Mrad2831_5068  methyl-accepting chemotaxis sensory transducer  52.59 
 
 
371 aa  332  9e-90  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0531667 
 
 
-
 
NC_011757  Mchl_4260  methyl-accepting chemotaxis sensory transducer  52.89 
 
 
352 aa  324  2e-87  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3892  putative methyl-accepting chemotaxis protein  52.89 
 
 
352 aa  322  4e-87  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.344749 
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  51.95 
 
 
345 aa  322  6e-87  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_007347  Reut_A0771  methyl-accepting chemotaxis sensory transducer  48.07 
 
 
409 aa  322  7e-87  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_1930  methyl-accepting chemotaxis sensory transducer  49.86 
 
 
366 aa  320  3e-86  Methylobacterium populi BJ001  Bacteria  normal  0.702252  normal  0.0243578 
 
 
-
 
NC_011757  Mchl_2252  methyl-accepting chemotaxis sensory transducer  49.57 
 
 
364 aa  320  3e-86  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1975  chemotaxis sensory transducer  49.57 
 
 
364 aa  320  3.9999999999999996e-86  Methylobacterium extorquens PA1  Bacteria  normal  0.129929  normal 
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  47.49 
 
 
351 aa  309  5e-83  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  47.02 
 
 
341 aa  288  2e-76  Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_011369  Rleg2_0931  methyl-accepting chemotaxis sensory transducer  43.44 
 
 
368 aa  244  1.9999999999999999e-63  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.219476  normal  0.828358 
 
 
-
 
NC_012850  Rleg_1080  methyl-accepting chemotaxis sensory transducer  43.57 
 
 
368 aa  243  5e-63  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1377  methyl-accepting chemotaxis protein  40.81 
 
 
370 aa  235  8e-61  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  31.96 
 
 
377 aa  191  2e-47  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  29.33 
 
 
334 aa  120  3e-26  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1760  CheW protein  28.93 
 
 
875 aa  95.9  9e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1709  hypothetical protein  25.68 
 
 
668 aa  79  0.0000000000001  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1071  CheW protein  29.41 
 
 
891 aa  78.6  0.0000000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2970  CheW protein  30.21 
 
 
841 aa  79  0.0000000000001  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_0470  CheW protein  32.45 
 
 
848 aa  73.9  0.000000000004  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_2865  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
722 aa  67.8  0.0000000003  Pseudomonas putida W619  Bacteria  normal  normal  0.370999 
 
 
-
 
NC_007520  Tcr_2145  hypothetical protein  26.92 
 
 
692 aa  66.6  0.0000000006  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_2299  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
182 aa  66.6  0.0000000006  Maricaulis maris MCS10  Bacteria  normal  normal  0.741118 
 
 
-
 
CP001509  ECD_01378  methyl-accepting chemotaxis protein III, ribose and galactose sensor receptor  50.67 
 
 
546 aa  65.5  0.000000001  Escherichia coli BL21(DE3)  Bacteria  normal  n/a   
 
 
-
 
CP001637  EcDH1_2225  methyl-accepting chemotaxis sensory transducer  50.67 
 
 
546 aa  65.5  0.000000001  Escherichia coli DH1  Bacteria  normal  0.213228  n/a   
 
 
-
 
NC_013421  Pecwa_1849  methyl-accepting chemotaxis sensory transducer  40.38 
 
 
570 aa  65.9  0.000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_2026  methyl-accepting chemotaxis protein III  50.67 
 
 
470 aa  65.5  0.000000001  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  hitchhiker  0.000000214401 
 
 
-
 
NC_009485  BBta_7334  putative methyl-accepting chemotaxis protein  50.68 
 
 
685 aa  65.5  0.000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.382599  normal 
 
 
-
 
NC_009800  EcHS_A1503  methyl-accepting chemotaxis protein III  50.67 
 
 
546 aa  65.5  0.000000001  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_1600  methyl-accepting chemotaxis protein III  50.67 
 
 
546 aa  65.5  0.000000001  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2238  methyl-accepting chemotaxis sensory transducer  50.67 
 
 
546 aa  65.5  0.000000001  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_012892  B21_01390  hypothetical protein  50.67 
 
 
546 aa  65.5  0.000000001  Escherichia coli BL21  Bacteria  normal  n/a   
 
 
-
 
NC_011149  SeAg_B1531  methyl-accepting chemotaxis protein III  45.12 
 
 
541 aa  64.7  0.000000002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_1755  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  39.47 
 
 
634 aa  65.1  0.000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0373336  normal  0.88588 
 
 
-
 
NC_013522  Taci_0323  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.83 
 
 
690 aa  64.7  0.000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_4454  methyl-accepting chemotaxis sensory transducer  44.05 
 
 
653 aa  65.1  0.000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.625525  n/a   
 
 
-
 
NC_012880  Dd703_1507  methyl-accepting chemotaxis sensory transducer  48.19 
 
 
573 aa  65.5  0.000000002  Dickeya dadantii Ech703  Bacteria  normal  0.273861  n/a   
 
 
-
 
NC_013522  Taci_0556  methyl-accepting chemotaxis sensory transducer with Cache sensor  47.83 
 
 
690 aa  64.7  0.000000002  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_011083  SeHA_C1804  methyl-accepting chemotaxis protein III  45.12 
 
 
535 aa  64.7  0.000000002  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal 
 
 
-
 
NC_011205  SeD_A1716  methyl-accepting chemotaxis protein III  45.12 
 
 
541 aa  64.7  0.000000002  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal  0.0288519 
 
 
-
 
NC_010498  EcSMS35_1753  methyl-accepting chemotaxis protein III  50.67 
 
 
546 aa  65.5  0.000000002  Escherichia coli SMS-3-5  Bacteria  normal  hitchhiker  2.79367e-17 
 
 
-
 
NC_011094  SeSA_A1744  methyl-accepting chemotaxis protein III  45.12 
 
 
535 aa  64.7  0.000000002  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.693576  normal  0.460124 
 
 
-
 
NC_011080  SNSL254_A1740  methyl-accepting chemotaxis protein III  45.12 
 
 
541 aa  64.7  0.000000002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal 
 
 
-
 
NC_013456  VEA_003063  methyl-accepting chemotaxis protein  39.82 
 
 
682 aa  65.1  0.000000002  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3240  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
533 aa  64.7  0.000000002  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_3951  hypothetical protein  40.37 
 
 
420 aa  64.7  0.000000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.131979  normal  0.604734 
 
 
-
 
NC_009052  Sbal_3087  methyl-accepting chemotaxis sensory transducer  33.9 
 
 
522 aa  65.1  0.000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4271  methyl-accepting chemotaxis sensory transducer  43.68 
 
 
535 aa  64.3  0.000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.79817  normal  0.653673 
 
 
-
 
NC_009831  Ssed_1066  methyl-accepting chemotaxis sensory transducer  47.83 
 
 
705 aa  64.3  0.000000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_3912  methyl-accepting chemotaxis sensory transducer  31.71 
 
 
713 aa  64.3  0.000000003  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1838  methyl-accepting chemotaxis sensory transducer  46.43 
 
 
667 aa  64.3  0.000000003  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0724  methyl-accepting chemotaxis sensory transducer  42.55 
 
 
558 aa  64.3  0.000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2308  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.71 
 
 
571 aa  64.3  0.000000003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.643806  normal 
 
 
-
 
NC_009783  VIBHAR_02788  hypothetical protein  40.66 
 
 
698 aa  64.3  0.000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_1961  methyl-accepting chemotaxis sensory transducer  46.34 
 
 
563 aa  64.3  0.000000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  46.43 
 
 
545 aa  64.3  0.000000003  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_1535  methyl-accepting chemotaxis sensory transducer  48.19 
 
 
574 aa  63.9  0.000000004  Dickeya zeae Ech1591  Bacteria  normal  0.241891  n/a   
 
 
-
 
NC_007492  Pfl01_4308  chemotaxis sensory transducer, Pas/Pac sensor  36.44 
 
 
439 aa  63.9  0.000000004  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.458128 
 
 
-
 
NC_009457  VC0395_A1017  methyl-accepting chemotaxis protein  32.79 
 
 
438 aa  63.9  0.000000004  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_3097  methyl-accepting chemotaxis sensory transducer  33.05 
 
 
522 aa  63.9  0.000000004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_4022  chemotaxis sensory transducer  52.38 
 
 
493 aa  63.9  0.000000005  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  30 
 
 
522 aa  63.5  0.000000005  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5165  methyl-accepting chemotaxis sensory transducer  44.94 
 
 
559 aa  63.5  0.000000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010501  PputW619_4603  methyl-accepting chemotaxis sensory transducer  40.62 
 
 
653 aa  63.9  0.000000005  Pseudomonas putida W619  Bacteria  normal  normal  0.149752 
 
 
-
 
NC_009512  Pput_0601  methyl-accepting chemotaxis sensory transducer  36.22 
 
 
653 aa  63.2  0.000000006  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_0435  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  47.14 
 
 
560 aa  63.5  0.000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.617966  n/a   
 
 
-
 
NC_012029  Hlac_1861  methyl-accepting chemotaxis sensory transducer  35.17 
 
 
505 aa  63.2  0.000000006  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.876271  normal  0.0686016 
 
 
-
 
NC_002947  PP_0562  methyl-accepting chemotaxis sensory transducer  36.29 
 
 
653 aa  63.2  0.000000007  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011663  Sbal223_1280  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  33.05 
 
 
522 aa  63.2  0.000000007  Shewanella baltica OS223  Bacteria  normal  normal  0.160306 
 
 
-
 
NC_012917  PC1_4172  methyl-accepting chemotaxis sensory transducer  40.95 
 
 
653 aa  63.2  0.000000007  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_00410  methyl-accepting chemotaxis protein  46.27 
 
 
394 aa  63.2  0.000000007  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010514  Mrad2831_6358  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  44.29 
 
 
490 aa  62.8  0.000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
NC_012912  Dd1591_2937  methyl-accepting chemotaxis sensory transducer  41.05 
 
 
564 aa  63.2  0.000000008  Dickeya zeae Ech1591  Bacteria  normal  0.0948744  n/a   
 
 
-
 
NC_013173  Dbac_1209  methyl-accepting chemotaxis sensory transducer  60.78 
 
 
560 aa  62.8  0.000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0163835  n/a   
 
 
-
 
NC_010172  Mext_3826  PAS sensor protein  41.67 
 
 
565 aa  63.2  0.000000008  Methylobacterium extorquens PA1  Bacteria  normal  0.464112  normal 
 
 
-
 
NC_004347  SO_1385  methyl-accepting chemotaxis protein  30.77 
 
 
520 aa  62.8  0.000000009  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009656  PSPA7_2287  putative chemotaxis transducer  43.18 
 
 
490 aa  62.8  0.000000009  Pseudomonas aeruginosa PA7  Bacteria  normal  0.0436901  n/a   
 
 
-
 
NC_008463  PA14_27000  putative chemotaxis transducer  43.18 
 
 
490 aa  62.8  0.000000009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_008700  Sama_0995  putative methyl-accepting chemotaxis sensory transducer  35 
 
 
517 aa  62.8  0.000000009  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_3950  methyl-accepting chemotaxis transducer  41.86 
 
 
725 aa  62  0.00000001  Pseudomonas putida KT2440  Bacteria  normal  normal  0.691578 
 
 
-
 
NC_010511  M446_5512  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.24 
 
 
492 aa  62.4  0.00000001  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.434942 
 
 
-
 
NC_006274  BCZK0488  methyl-accepting chemotaxis protein  36.19 
 
 
660 aa  62.4  0.00000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_009457  VC0395_A1488  methyl-accepting chemotaxis protein  44.16 
 
 
672 aa  62.4  0.00000001  Vibrio cholerae O395  Bacteria  normal  0.619219  n/a   
 
 
-
 
NC_012917  PC1_1208  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
555 aa  62.4  0.00000001  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  unclonable  0.000392698  n/a   
 
 
-
 
NC_007778  RPB_0889  methyl-accepting chemotaxis sensory transducer  43.75 
 
 
540 aa  62.4  0.00000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0851  methyl-accepting chemotaxis sensory transducer  53.57 
 
 
765 aa  62  0.00000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013889  TK90_1402  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  49.3 
 
 
435 aa  62.4  0.00000001  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_2808  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.17 
 
 
522 aa  62.4  0.00000001  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4309  methyl-accepting chemotaxis sensory transducer  45 
 
 
628 aa  62  0.00000001  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00619864  normal 
 
 
-
 
NC_008322  Shewmr7_2891  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.17 
 
 
522 aa  62  0.00000001  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3123  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
555 aa  62.4  0.00000001  Pectobacterium wasabiae WPP163  Bacteria  decreased coverage  0.000142041  n/a   
 
 
-
 
NC_009438  Sputcn32_1196  methyl-accepting chemotaxis sensory transducer  30 
 
 
522 aa  62.4  0.00000001  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
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