Gene Hmuk_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHmuk_1641 
Symbol 
ID8411164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalomicrobium mukohataei DSM 12286 
KingdomArchaea 
Replicon accessionNC_013202 
Strand
Start bp1563800 
End bp1565356 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content65% 
IMG OID645019968 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_003177462 
Protein GI257387689 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.901147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGT TATCACATCG AATCAATAGA TACCTACCGG CGTCGCTGCA GTCGACGCTG 
AATCGCGCGC TGTACGTTCA TGCTGGAATA GCCGTCGTCG CTCCGCTGTT TGTCGCGTTC
GTGACCGGAT CGATCCTCAC AGCGGTCGCG ATTCTCTTGT TTACGTTCGG CTTCGGTGCC
CTGATCTACG GCGAAATGTA CCGGATCATC CAGAACCTCC AGGACGCGAC GGGTGCGATC
GGCGAGGAGA CGTACGACAT CGAGATCGCC GAGCACCGTG CCGACGAAAT CGACGACGTC
TATCGCCGGA TCGAGGCGAC AGCGGCCGAT CTGGACGAAC GCATCAGCGA GGCAGAAGCG
GCCCGTGAGG AAGCAGAGAC GGCCCGCAGA GAGGCGGAAG CGGCACAGGA CGAGGCCGAA
GCGACAGCCG AGCGGTTACG GCGACGGGCA GACGAATACA GTACGGTGAT GCGGACCGTC
GCAGACGGGG ACCTGACGCG ACGACTACCG ACTGACGCCG ACAACGAGGC CATGGCCGAG
ATCGCGACCT CGTTCAACGC GATGCTCGAC GATCTGGAGG GGACGGTCCA GGAGGTGATC
GCGTTCGCCG AGACGGTGTC GACGGTCACT GGCAGCGTCG AGGCGCGTAG CGAGGCGATC
GAACGCGCGA GCAGCGACGT CGACGACGCG ATGGACGAGA TCGTCGAGGG GGCAGACGAC
CAGCGGGACC GTCTCGGTGA CGCAACCAAC CAAGTCAACG ACATTTCAGC GACCGTCGAG
GAGATCGCGG CCTCCGCGAC GGAGGTCGCA GAGACGGCCG ACGAGGCAGC CGAAACGGGT
CGAGACGCGG GGTCGGCGGC TGGTGCTGCC GTCGACGAGA TCGAGACGAT CACGGCAGCA
GTGTCGGCGA TGGCCGACGA CGTGACCGAA CTCTCGGCGC ACATCGATCA GGTCGACGAG
ATCGTCGACC TGATCGACGG GATCGCGGAG CAGACCAACA CGCTCGCACT CAACGCGTCG
ATCGAGGCCG CACGTGCCGG CGAGGCGGGT GAGGGATTCG CCGTGGTCGC CGACGAGGTC
AAGGGGCTGG CACAGGAGAC CCAGGAAGCG ACAAAGGAGG TCGAGTCGCT GATCGATGCG
ATGCGCGAGC AGGCGACGAC CGCGGTCGAT GGCGTCGAGA CTGTCGAGTC GAGCGTCGAG
CAGGGCACAG AGACCATCGA GGACGCGATG GGCGCGATCA CGACGGTCGT CGACAAGATC
GAGACGCTCA ACGCGGGCGT ACAGGAGATC GACGCCGCGA CCGACGAACA GGCCGAGACG
ACCCAACGCG TCGTCGGGAC GATCGAGGAG ACCGCCGCAG TCAGTGACCA GACGGCGTCG
CGGGCACGCT CTGTCGGCGA GACTGTCGGC GAGCAACTGG GCGAGACAGA CGCACTGACC
GACGCGATCG GCGACCTCTC GACGGAGGCG AGGCGGCTGC AGACCGCACT CGAAGATCTC
CAGGTGAGCG ATTCGGCGAC GGAGGCCGGC GGTGTCGCCA CCGCGACCGA CGACTGA
 
Protein sequence
MGALSHRINR YLPASLQSTL NRALYVHAGI AVVAPLFVAF VTGSILTAVA ILLFTFGFGA 
LIYGEMYRII QNLQDATGAI GEETYDIEIA EHRADEIDDV YRRIEATAAD LDERISEAEA
AREEAETARR EAEAAQDEAE ATAERLRRRA DEYSTVMRTV ADGDLTRRLP TDADNEAMAE
IATSFNAMLD DLEGTVQEVI AFAETVSTVT GSVEARSEAI ERASSDVDDA MDEIVEGADD
QRDRLGDATN QVNDISATVE EIAASATEVA ETADEAAETG RDAGSAAGAA VDEIETITAA
VSAMADDVTE LSAHIDQVDE IVDLIDGIAE QTNTLALNAS IEAARAGEAG EGFAVVADEV
KGLAQETQEA TKEVESLIDA MREQATTAVD GVETVESSVE QGTETIEDAM GAITTVVDKI
ETLNAGVQEI DAATDEQAET TQRVVGTIEE TAAVSDQTAS RARSVGETVG EQLGETDALT
DAIGDLSTEA RRLQTALEDL QVSDSATEAG GVATATDD