Gene RPC_4930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRPC_4930 
Symbol 
ID3973847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris BisB18 
KingdomBacteria 
Replicon accessionNC_007925 
Strand
Start bp5501834 
End bp5502922 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content69% 
IMG OID637928043 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_534771 
Protein GI90426401 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.226636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGCCG CGACTGATCG CACCAGCCCC CGGGCAGCCG CCCTCGCGAC CACACCGGAC 
AGCGGCGAGC AGGACACCGA CATCGCCGCC TTGATCGCGC GGTTGACCGC CGAGGTCAAC
CAGGTGGCCT GCGAAAAGAC CCGGTCGATC CAGAACATCA CCAACCAGAT GAAGATGCTG
GCGCTGAATG CGCTGATCGA AAGCTCGCGC GCCGGGGTGC AGGGCGCCGG CTTCGCGGTG
GTGGCGCAGG AGGTCCGCGC GGTCGGCCAG CAGGTCGAAA CCATCGCCCG CGAGCTGGAG
ACCCAGTTGA CGCGGCGCAC CGCCAATCTG ATGCAATCGA TCACCCAGAT GACCGAGCGC
TCGCGCGGCG AACGCATGGT CGATCTGGCG CTGAACGCCA TCGAACTGAT CGACCGCAAT
CTCTATGAGC GCACCTGCGA CGTGCGCTGG TGGGCGACCG ACTCCGCGGT GGTGGATTGC
GCCGAGGCGG CCAACGCCGC CAATGTGGCG CTGGTCGCGG AGCGCCTGGC GGTGATCCTG
CGCGCCTATA CGGTGTATCT CGATCTGTGG CTGTGCGATC TCGATGGCAA CATCATTGCC
AGCGGCCGCG GCCGTCAGTT CGACGTCACC GGCGCCAATG TCGCCAATAC CACGTGGTTT
CGCGACGCCA AGAAGCTGCG CTCCGGCGAC GACTACGTCG CCGGCGACGT CGAGCGGCAG
CCGCTGCTCG GCGACGCGCA GGTCGCCACC TATTGCGCCA GCGTGCGCCA GGGCGGCAAC
GCCCACGGCC GGCCGCTCGG CGTGCTGGCG ATCCATTTCG ACTGGCAGAC CCAGGCCCGC
GCCATCGTCG AAGGGGTCCG GGTCGACGAC GACAAGGCCC GCGTGCTGCT GGTGGACTCC
AACTTCCGGG TGATCGCCGC CTCCGACGGC CAGGGGCTGC TGACCGAGCG CGTGCCGCTG
ACCCTGAACG GCCGCCGCGC CGGCTTCTAC AACGACCGCA CCGGCGCGCA GATCGCGTTC
CACGCCACCC CGGGCTACGA GACCTACAAG GGACTGGGCT GGTACGGCGT GATCATGCAG
ACGGGGTAG
 
Protein sequence
MVAATDRTSP RAAALATTPD SGEQDTDIAA LIARLTAEVN QVACEKTRSI QNITNQMKML 
ALNALIESSR AGVQGAGFAV VAQEVRAVGQ QVETIARELE TQLTRRTANL MQSITQMTER
SRGERMVDLA LNAIELIDRN LYERTCDVRW WATDSAVVDC AEAANAANVA LVAERLAVIL
RAYTVYLDLW LCDLDGNIIA SGRGRQFDVT GANVANTTWF RDAKKLRSGD DYVAGDVERQ
PLLGDAQVAT YCASVRQGGN AHGRPLGVLA IHFDWQTQAR AIVEGVRVDD DKARVLLVDS
NFRVIAASDG QGLLTERVPL TLNGRRAGFY NDRTGAQIAF HATPGYETYK GLGWYGVIMQ
TG