Gene Caul_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3960 
Symbol 
ID5901422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4289104 
End bp4290207 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content69% 
IMG OID641564481 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001685583 
Protein GI167647920 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.273719 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.409706 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGCTG AAGACGCCAG CCTCCGCCCA GAACGTATTC TGGAACTCAG CGAACGCCTC 
AGCGCCGTGG CCGGCGAGAA GATCGGCGAG ATCGCCTACG TCAACCGCTC GGCCAAGATG
CTGGCGATCA ACGCCCTGAT CGTCGCCGCC CGCGCGGGCG AGGCGGGGCG CGGCTTCGCG
ATCGTCGCCG AGGAGTTCAA GACCATCTCC ACCCAGATCG ACGTGGTGGC CGCCGCCCTG
GAGAGCCAGG TGCGCGCCGA CCTCGACGAA CTGACCAAGA TCGGCGGGGC GATCCTGGGC
CACCTGCGCG GCCAGCGCCT GGCCGACCTG GCCCTGAACG CCATCGAGAT CATCGATCGC
AACCTCTATG AGCGCACCTG CGACGTGCGC TGGTGGGCCA CCGACAGCGC CGTGGTCGAC
TGCGTGGCGG CCCCGTCGCG CGAGGCCTCC ACCCATGCCA GCCAGCGCCT GAAGGTGATC
CTCGACGCCT ACACCGTGTA TCTCGACCTG TGGATCGCCG ATCCGTCGGG GCGGGTGATC
GCCAGCGGTC GTCCCGACAG GTACCCGGCC GCCAAGAACG CCTCGGTGGC CGAGGCCGAG
TGGTTCAAGA ACGCCCTGCG CACCAAGTCG GGCGACGACT TCACCGTCTG CGACATCGAA
CGGGTCAAGG CCCTGAACGA CGCCCCGGTC GCCACCTACG CCACCGCCAT CCGGGCCGGC
GGCCAGGCCA ATGGCAAGGT GATCGGCGTG CTGGGCGTTC ATTTCGACTG GAAGCCCCAG
GCCCAGGCCG TGGTCGACGG CGTGCGCCTG ACCGAGGAGG AGCGCGCCCG CTCGCGCGTG
CTGCTGCTCG ACCAGAACCA CCGGGTGCTG GCCAGCTCCG ACGGCAAGGG CGTTCTGGAG
GAAACCTTCA AGCTCGACAC CTCGGCCGGC GACATGGGCA GCTACGCCGA GGGCGCGCGC
ACCGTCGGCT ACGCCCTGAC CCCGGGCTAC GAGACCTATG TCGGCATGGG CTGGTACGGC
TGCCTCGTTC AGACGGCGGA GGTCGAGACG CCAGCGGCGA CGTTTCGCCC GGCCGTGACG
CCGGGCAAGC TCAACGCGGC TTAG
 
Protein sequence
MSAEDASLRP ERILELSERL SAVAGEKIGE IAYVNRSAKM LAINALIVAA RAGEAGRGFA 
IVAEEFKTIS TQIDVVAAAL ESQVRADLDE LTKIGGAILG HLRGQRLADL ALNAIEIIDR
NLYERTCDVR WWATDSAVVD CVAAPSREAS THASQRLKVI LDAYTVYLDL WIADPSGRVI
ASGRPDRYPA AKNASVAEAE WFKNALRTKS GDDFTVCDIE RVKALNDAPV ATYATAIRAG
GQANGKVIGV LGVHFDWKPQ AQAVVDGVRL TEEERARSRV LLLDQNHRVL ASSDGKGVLE
ETFKLDTSAG DMGSYAEGAR TVGYALTPGY ETYVGMGWYG CLVQTAEVET PAATFRPAVT
PGKLNAA