Gene Daro_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1071 
Symbol 
ID3568137 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1173541 
End bp1176216 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content53% 
IMG OID637679533 
ProductCheW protein 
Protein accessionYP_284297 
Protein GI71906710 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAC GCAAGAAGTC GTATGCCAAG GCCGACTTGA GTTATCTATC TCGCTTTATG 
GGGGCTCTTG TCCCAGACCA GAAGCGCCTG GGGGAAATCC AGGCTGTCTA TGACAACCTG
ACTTTGCTTG GTCAGTTGCT CGGGGCAGGT ACGGATATCA GCAGCATGCG CCAGGATTTT
CAGCACTTGG CGACTGTTCT CCTGGAGCAA CTCGCCAAGG AGCACTACAA AAAAGCCGCG
CTCAATCTCG GTTCATGTGC GCGGGTGGCC ATTGATGTGC TCACGCGCAA TCTGTTTGAG
CGAACTGCTG ACATCGGATT CTTGGCGACT GACACTCAAA TTTGCTCATT CGCCGAGGCG
GTTGAGGCAA ATCCCGAGGT CAAGAACGAC CCCGGTTGGC GGTTAGAGCT TCAGAAGCAC
TTTGCAGAGT ACGTCAGTAA ATATTCGGTC TATCACAACA TCATTCTATT GTCGCCCACC
GGCGAAGTTC TGGTTCAGCT TGAAGGTAAC AATCCGGTGA CCCAGACAAC GGACCGATTG
CTGGATGACG CATTAACGAC AACCGAGGGA TATATCGAAG TATCTCGGCC GGTCGACCTG
CTTCCCAACG ACGCGACTCC CCTGATTTAC GCGTACCGGG TCATGTCGAG CGATGGTAGT
CACCCGGTCG GCGTGCTGTG TCTGTGTTTT AAATTTCAGG ACGAGTGCCA ACGAATCTTT
GAGAGTCTGG TTGCTGAAGA TGACTGGAGC GTTTTAACGC TGCTCGACGC CAACAACACG
GTTATTTCAA GTAGTGACCC CTACCAGTTT CCTGTGGGAG CCCGTCTGGA ACCCATTGCT
GACGATGCCT GCCACATCAT TCGCTTTAGT GGCCGCGAAT ACCTCGCCAC CTCGCGTAAA
GCGCACCCGT ATCAAGGCTA TGCGGGACCT GGCTGGGTTG GGCACGCGTT GGCCCCGCTC
AATCATGCCT TCGACATATC TGAATCGTTG GAGCTGGAAG GCGTTTCAGA AGACTACATT
CAGAGCGTAC TCGACGTCTC GACGCTGTTT ACCCATGAAC TGCGTAATAT CCCCGTCCGG
GCGGAAACTA TCCAACAGGA ACTCAATCGG GCCGTATGGA ACGGGAATAT TTGGCTGGCC
CGGGATAACA ATGCGCATAA CTCGGAGTTT GCCAAGGTGC TTCTACGTGA AATAGGGAGC
ACCGGTGCCC ATACGCGTGA TGTGTTTAGC GAAGCGACCG CCAATTTATA CAAGACAGTC
ATTTCATCCG TACTGTTCGA TTGCGGAACG CAGGCTGCAC TTGCTATCGA CATCATGGAC
CGCAATCTCT ACGAGCGCGC TAACGATTGC CGGTGGTGGG CACTGACCAA AGAGTTCCGG
CACGAACTGG CTTGCGTCGA CCTTGCGGAT TCAGAACAGC AGAAGCGCCT GAGGGATATC
CTGCGGCGCA TCAACTCCCT GTATACGGTT TACAGCAACA TGGTCCTTTT TGACCGAAGC
GGTCGCGTAG TCGCTCTTTC CAATCCGGCC TATAACGACT GGATAGGGAA GCCAGTGAAC
GAAAGTTGGG TGCGTGAGAC GCTGGGGCTC AAGGAAGCGC AACTTTATTC AGTATCCGAT
TTCGCGAATA GCGAGTTGTA TGCAGGCCAT CCTACTTATG TCTTCACCGC CGCCGTGCGA
GCGCCGCAAA GTAGTGAACC GGTCGGGGGT ATCGCGATTG TGTTCGACTC AACTTCACAA
TTTAAAGCGA TGCTGGACGA CGTATTGCCA AGACAAGAAA ACGGTGACTT GGTCGAAGGG
GCCTTTGCGG TATTTGCCGA AGGTGATGGC AAAGTTGTTG CCAGCACCCA TCCGGAAATT
GTGCCCTGCA CCCGACTGGA AATTGGACGT GAATTCTTGA CCATTCAGCC GGGTGACGGT
GTCACCAAGA TAGTCGAGCA TCATGGCAAA TACTACGCTG TGGGGTCCTG CATGAGCGCT
GGCTATAGGG AATACAGTGC GACCGGCACA GGCAAATCAG TCGGCGTCGT TGCCCTTGTC
TTTACGCCGC TGTCGGACAG CATTGCCACT GAACAGCGAC GGCCACCACT ACGCGCATCC
AATAATCGCC TCAGGACAGT GCCAACCCGC GGCGTCGAAA CGGTGGATAT TGCGAGTTTT
TATATTGGTC AAAGCTGGTA CGGTCTAAAG CCGTCCTCTG TTATTGCTGC TGTCGATGCC
GAACGTTTGA CCCCCATGCC AGGAACGTCA GAGTTTGTAG CGGGCTGCTT GATGTTCGAC
GAACGGGCCA TTTCGGTATT TGACCTCTCT TCGATACTAA GCCCCGTCAG GCCGGATGAA
GAACGGCGGA AACTGCGAAG TAGCACAGGA AAGCGCCAGA TTCTTATCTT GAACTCGCAG
CATTACCAGA CGCAATTTGG AATTCTGGTG GACAATCTCG CTGAAATCAC CGAAATCGCT
TCGCATCGCA TCGAGCCCGT ACCCGGCATG ATGTCGGATG GGAATTCGCT AATTGATAGT
CTCGTCAAGC CAATGGAAAA TGATGCTGAG CGGAGAATTC TCATCGTTCT CTCCACAGAA
AAACTCGCGA AGCGCTTTGC GGCGCCTGCT GCGATTACAG TGACGCCTGT GCATCACTCT
GTCGATTCAT TGCAGCGAAT TTGCGCTATA GCTTAG
 
Protein sequence
MRKRKKSYAK ADLSYLSRFM GALVPDQKRL GEIQAVYDNL TLLGQLLGAG TDISSMRQDF 
QHLATVLLEQ LAKEHYKKAA LNLGSCARVA IDVLTRNLFE RTADIGFLAT DTQICSFAEA
VEANPEVKND PGWRLELQKH FAEYVSKYSV YHNIILLSPT GEVLVQLEGN NPVTQTTDRL
LDDALTTTEG YIEVSRPVDL LPNDATPLIY AYRVMSSDGS HPVGVLCLCF KFQDECQRIF
ESLVAEDDWS VLTLLDANNT VISSSDPYQF PVGARLEPIA DDACHIIRFS GREYLATSRK
AHPYQGYAGP GWVGHALAPL NHAFDISESL ELEGVSEDYI QSVLDVSTLF THELRNIPVR
AETIQQELNR AVWNGNIWLA RDNNAHNSEF AKVLLREIGS TGAHTRDVFS EATANLYKTV
ISSVLFDCGT QAALAIDIMD RNLYERANDC RWWALTKEFR HELACVDLAD SEQQKRLRDI
LRRINSLYTV YSNMVLFDRS GRVVALSNPA YNDWIGKPVN ESWVRETLGL KEAQLYSVSD
FANSELYAGH PTYVFTAAVR APQSSEPVGG IAIVFDSTSQ FKAMLDDVLP RQENGDLVEG
AFAVFAEGDG KVVASTHPEI VPCTRLEIGR EFLTIQPGDG VTKIVEHHGK YYAVGSCMSA
GYREYSATGT GKSVGVVALV FTPLSDSIAT EQRRPPLRAS NNRLRTVPTR GVETVDIASF
YIGQSWYGLK PSSVIAAVDA ERLTPMPGTS EFVAGCLMFD ERAISVFDLS SILSPVRPDE
ERRKLRSSTG KRQILILNSQ HYQTQFGILV DNLAEITEIA SHRIEPVPGM MSDGNSLIDS
LVKPMENDAE RRILIVLSTE KLAKRFAAPA AITVTPVHHS VDSLQRICAI A