Gene BBta_3999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_3999 
Symbol 
ID5152062 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp4206496 
End bp4207584 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content66% 
IMG OID640558832 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001239973 
Protein GI148255388 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.80171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACTG CGCCTGATTT GAAGTCGTCC CATTCCCTCG TTTCCCCGCA AGCGTCCCGT 
GCCGACGACG AGACCGACGT TTCCGCGCTG ATCGCGCGGC TCACCGGCGA GGTCAATCAG
ATCGCCTGCG AGAAGACCAA GTCGATCCAG CAGATCACCA ATCAGATGAA GATGCTGGCG
CTGAACGCGC TGATCGAGAG CTCGCGCGTC GGCGCGCAGG GCGCCGGCTT TGCCGTCGTG
GCGCAGGAGG TGCGCGCCGT CGGCCAGCAG GTCGAGACCA TCGCCCGCGA GCTCGAAGGA
CAGCTGACGA CACGCACCGG CAATCTCAAG AGCTCGATCG AGCGCATGAC CGAGCGGGCG
CGCGGCGAGC GCATGGTCGA TCTCGCGCTG AACGCCATCG AGCTGATCGA CCGCAATCTT
TATGAGCGGA CCTGTGACGT GCGCTGGTGG GCGACGGATT CGGCCGTGGT CGATTGTGCG
GCTTCGCCCG ATGCTGCCCG CGTCGTCCAT GTGTCCGAAC GGCTCGCGGT GATTCTCTCC
GCCTACACGG TCTATCTCGA TCTCTGGCTA TGCGATCCCA GCGGCAAGGT CATCGCCAAC
GGCCGGGCGG ACCGCTTCAA CGTCGTCGGC CAGAGCGTGG CCGATACCAA ATGGTTTCGC
GAGGCGCGCG GCCTGCGCTC GGGCGACGAC TATGTCGCAG GCGACGTCGA GTGCCAGCCG
CTGCTCGGCA ACGCCCAGGT CGCGACCTAT TGCGCATCGG TGCGCGAGGA CGGCAAGGCC
CATGGCAAGC CGCTCGGGGT GCTCGCGATC CATTTCGATT GGGAAGCGCA GGCGCGCGCC
ATCGTGCAGG GCGTTCGCGT CAGCGAAAGC GACAAGGCCC GTGTGCTGCT GGTCGACTCC
AACGGCCGTG TCATTGCTGC GTCGGACGGC CAGGGCATCC TCAGCGAGCG CGTTTCGCTC
AGGCTCGACG GCAAGCCCAG CGGCTTCTAT CAGGACGCAT CGGGCCGCCT GGTCGCCTTT
CACGCCACGC CCGGCTACGA GACCTACAAG GGTCTCGGCT GGTACGGCGT GATCATCTCT
GGCGCGTGA
 
Protein sequence
MLTAPDLKSS HSLVSPQASR ADDETDVSAL IARLTGEVNQ IACEKTKSIQ QITNQMKMLA 
LNALIESSRV GAQGAGFAVV AQEVRAVGQQ VETIARELEG QLTTRTGNLK SSIERMTERA
RGERMVDLAL NAIELIDRNL YERTCDVRWW ATDSAVVDCA ASPDAARVVH VSERLAVILS
AYTVYLDLWL CDPSGKVIAN GRADRFNVVG QSVADTKWFR EARGLRSGDD YVAGDVECQP
LLGNAQVATY CASVREDGKA HGKPLGVLAI HFDWEAQARA IVQGVRVSES DKARVLLVDS
NGRVIAASDG QGILSERVSL RLDGKPSGFY QDASGRLVAF HATPGYETYK GLGWYGVIIS
GA