| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_1377 |
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| Symbol | mcpA |
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| ID | 7389111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | - |
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| Start bp | 1155804 |
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| End bp | 1156916 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 643650782 |
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| Product | methyl-accepting chemotaxis protein |
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| Protein accession | YP_002548988 |
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| Protein GI | 222148031 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATT CGCCAGCACC CCTCCGCCAG AACCGGGTCG TGAACGCAAC GCCTCGCTCC
ATGCGGCTGA TCACCGAAAG CATTGGCGGT GATCTCGAAA CATTCAGCAT GAACAATACA
TTGGTGGTCA AGCAGATCCG CCTGCTGGCG ATCAATGCCC TGATTGAAGC CGCGCGCGCC
GGTGACACGG GCAAAGGCTT CGCGGTCGTG GCCAATGAAG TTCAGCGCCT GGCTCAAAGT
GCAGCCGACA TCGCCAAACA GTTCGAGGAC AATGTCCTGA GCCGCATAAA GCTTGGCAGG
GCCATGGCCG ATGGTTTGGT TCAAGAAATG GAAGGTGTGC GGCTGACCGA TCTCTGCCTG
ACGCTGGTGC AGTTCATCGT CCGCAATCTG TTCGAACGCA CCGCCGATGT CCGTTGGTGG
GCGACAGACA CCGCCCTGTG GTCGGCGTTG CAAAATCCAA ACATCGAAAA CTTCAACCAT
GCCTCGGAAA GGCTGGGCGT CATCAATCGG TTCTACACGG TCTATCTCGA CCTCGTGATG
ACGGATGCCA GTGGCCGTGT CGTCGCCTCT GCCAATCCGC GCTACCGAAA CAATCTTCAA
AACAAGAATT TTGCCCAGGA AACATGGGTC AAGGCAGCCG GTCAAACGAA AAGCGGCGAC
GACTATATCG TTGACGAGGT CAAAAAAAGC CCTCTGCATG ACAACCGAGA CACGCTGGTC
TATGCAACCG GCATTCGGGC GGGAGGCCGT TCGGACGGCG AACTGCTGGG AATGCTTGGC
GTCTATTTCG ACTGGCAGGC CCAGGGTCAA GCCATTGTCG AAAAAGAAGC CAATCTGCCG
CCGCATCTCG TCGACAAGAC CCAGGTCATG CTGCTCGATG GTTCGATGAG GGTGATTGCC
AGCTCCCATC CGAGCCGGAT CTACACCCAT TTCCCGCTGC ACAATAGCCA AGCAAACCAA
AAAGGCAGTT ACTATGATGA CAGCGGAAAC ATCATCGCCT TTGCCAAAAC TCTTGGTTAT
GAAGACTATG ACGGTCTTGG TTGGTACGGC GTGATTATTC AACAAACCGA GGCGGATAAG
GATATTCGCG CAAAGCTTGA TATCGGTCTG TGA
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| Protein sequence | MSNSPAPLRQ NRVVNATPRS MRLITESIGG DLETFSMNNT LVVKQIRLLA INALIEAARA
GDTGKGFAVV ANEVQRLAQS AADIAKQFED NVLSRIKLGR AMADGLVQEM EGVRLTDLCL
TLVQFIVRNL FERTADVRWW ATDTALWSAL QNPNIENFNH ASERLGVINR FYTVYLDLVM
TDASGRVVAS ANPRYRNNLQ NKNFAQETWV KAAGQTKSGD DYIVDEVKKS PLHDNRDTLV
YATGIRAGGR SDGELLGMLG VYFDWQAQGQ AIVEKEANLP PHLVDKTQVM LLDGSMRVIA
SSHPSRIYTH FPLHNSQANQ KGSYYDDSGN IIAFAKTLGY EDYDGLGWYG VIIQQTEADK
DIRAKLDIGL
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