More than 300 homologs were found in PanDaTox collection
for query gene Rru_A0082 on replicon NC_007643
Organism: Rhodospirillum rubrum ATCC 11170



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007643  Rru_A0082  chemotaxis sensory transducer  100 
 
 
359 aa  717    Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  71.94 
 
 
362 aa  513  1e-144  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0081  chemotaxis sensory transducer  68.33 
 
 
362 aa  491  9.999999999999999e-139  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  59 
 
 
367 aa  393  1e-108  Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  56.19 
 
 
362 aa  380  1e-104  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  55.72 
 
 
359 aa  366  1e-100  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
NC_007925  RPC_4930  methyl-accepting chemotaxis sensory transducer  54.13 
 
 
362 aa  367  1e-100  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226636 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  54.98 
 
 
361 aa  360  2e-98  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_5068  methyl-accepting chemotaxis sensory transducer  55.95 
 
 
371 aa  355  7.999999999999999e-97  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0531667 
 
 
-
 
NC_010725  Mpop_1930  methyl-accepting chemotaxis sensory transducer  53.3 
 
 
366 aa  353  2e-96  Methylobacterium populi BJ001  Bacteria  normal  0.702252  normal  0.0243578 
 
 
-
 
NC_011757  Mchl_4260  methyl-accepting chemotaxis sensory transducer  55.9 
 
 
352 aa  348  7e-95  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3892  putative methyl-accepting chemotaxis protein  55.02 
 
 
352 aa  348  1e-94  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.344749 
 
 
-
 
NC_010172  Mext_1975  chemotaxis sensory transducer  53.64 
 
 
364 aa  344  1e-93  Methylobacterium extorquens PA1  Bacteria  normal  0.129929  normal 
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  54.6 
 
 
345 aa  341  9e-93  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_011757  Mchl_2252  methyl-accepting chemotaxis sensory transducer  53.35 
 
 
364 aa  341  1e-92  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  48.73 
 
 
351 aa  320  1.9999999999999998e-86  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A0771  methyl-accepting chemotaxis sensory transducer  51.03 
 
 
409 aa  310  2.9999999999999997e-83  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  48.34 
 
 
341 aa  292  5e-78  Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_011369  Rleg2_0931  methyl-accepting chemotaxis sensory transducer  43.02 
 
 
368 aa  262  6e-69  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.219476  normal  0.828358 
 
 
-
 
NC_011989  Avi_1377  methyl-accepting chemotaxis protein  41.5 
 
 
370 aa  256  3e-67  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1080  methyl-accepting chemotaxis sensory transducer  43.32 
 
 
368 aa  256  6e-67  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  33.97 
 
 
377 aa  208  1e-52  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.29 
 
 
334 aa  132  6e-30  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1760  CheW protein  34.78 
 
 
875 aa  97.1  5e-19  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1709  hypothetical protein  27.61 
 
 
668 aa  86.7  5e-16  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2970  CheW protein  31.06 
 
 
841 aa  83.6  0.000000000000005  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_2145  hypothetical protein  24.77 
 
 
692 aa  72.8  0.000000000009  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1071  CheW protein  30.85 
 
 
891 aa  72.4  0.00000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1861  methyl-accepting chemotaxis sensory transducer  38 
 
 
505 aa  67.4  0.0000000003  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.876271  normal  0.0686016 
 
 
-
 
NC_007908  Rfer_0470  CheW protein  27.15 
 
 
848 aa  67.8  0.0000000003  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7334  putative methyl-accepting chemotaxis protein  38.66 
 
 
685 aa  67  0.0000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.382599  normal 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  39.58 
 
 
565 aa  66.2  0.0000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_0868  putative methyl-accepting chemotaxis receptor/sensory transducer  48.78 
 
 
571 aa  66.6  0.0000000007  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0528119 
 
 
-
 
NC_007643  Rru_A3241  chemotaxis sensory transducer  38.54 
 
 
445 aa  66.2  0.0000000009  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.768967  n/a   
 
 
-
 
NC_009456  VC0395_1007  hemolysin secretion protein HylB  48.05 
 
 
548 aa  65.9  0.000000001  Vibrio cholerae O395  Bacteria  normal  0.702356  n/a   
 
 
-
 
NC_013512  Sdel_2256  chemotaxis sensory transducer  45.33 
 
 
548 aa  64.7  0.000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  hitchhiker  0.000776973  n/a   
 
 
-
 
NC_014248  Aazo_4950  methyl-accepting chemotaxis sensory transducer  40.82 
 
 
975 aa  65.5  0.000000002  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2078  chemotaxis sensory transducer  47.5 
 
 
561 aa  65.5  0.000000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.960991  n/a   
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  48.15 
 
 
579 aa  65.1  0.000000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_013521  Sked_03110  methyl-accepting chemotaxis protein  52.05 
 
 
347 aa  65.1  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0123169  normal 
 
 
-
 
NC_012917  PC1_1669  methyl-accepting chemotaxis sensory transducer  48.75 
 
 
560 aa  65.5  0.000000002  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_1636  methyl-accepting chemotaxis sensory transducer  34.09 
 
 
456 aa  64.7  0.000000002  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.0000322642  n/a   
 
 
-
 
NC_008048  Sala_0556  methyl-accepting chemotaxis sensory transducer  45.05 
 
 
450 aa  65.1  0.000000002  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.17673  normal  0.122015 
 
 
-
 
NC_013521  Sked_36630  methyl-accepting chemotaxis protein  49.33 
 
 
540 aa  64.7  0.000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4974  methyl-accepting chemotaxis sensory transducer  42.5 
 
 
440 aa  64.3  0.000000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.178259  n/a   
 
 
-
 
NC_007643  Rru_A1408  chemotaxis sensory transducer  48.75 
 
 
568 aa  64.7  0.000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.591131  n/a   
 
 
-
 
NC_007643  Rru_A2076  chemotaxis sensory transducer  46.25 
 
 
561 aa  64.3  0.000000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.723039  n/a   
 
 
-
 
NC_009092  Shew_0085  methyl-accepting chemotaxis sensory transducer  51.47 
 
 
638 aa  64.3  0.000000003  Shewanella loihica PV-4  Bacteria  normal  0.0647334  normal 
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  34.45 
 
 
485 aa  63.9  0.000000004  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_009052  Sbal_1494  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
548 aa  63.9  0.000000004  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3709  methyl-accepting chemotaxis sensory transducer  36.84 
 
 
707 aa  63.9  0.000000004  Marinomonas sp. MWYL1  Bacteria  normal  0.852924  normal  0.967698 
 
 
-
 
NC_009485  BBta_1840  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
561 aa  63.9  0.000000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.745103 
 
 
-
 
NC_002939  GSU0766  methyl-accepting chemotaxis protein, putative  38.6 
 
 
745 aa  63.5  0.000000005  Geobacter sulfurreducens PCA  Bacteria  normal  0.696907  n/a   
 
 
-
 
NC_013421  Pecwa_1940  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
560 aa  63.9  0.000000005  Pectobacterium wasabiae WPP163  Bacteria  normal  0.364705  n/a   
 
 
-
 
NC_011830  Dhaf_4040  methyl-accepting chemotaxis sensory transducer  48.53 
 
 
285 aa  63.5  0.000000005  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000197735  n/a   
 
 
-
 
NC_007643  Rru_A1802  chemotaxis sensory transducer  36.44 
 
 
438 aa  63.5  0.000000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_0918  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.36 
 
 
657 aa  63.5  0.000000005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_009092  Shew_2301  methyl-accepting chemotaxis sensory transducer  35.53 
 
 
705 aa  63.5  0.000000006  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5364  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.39 
 
 
514 aa  63.2  0.000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_0506  chemotaxis sensory transducer  36.84 
 
 
982 aa  62.8  0.000000008  Anabaena variabilis ATCC 29413  Bacteria  normal  0.202983  normal 
 
 
-
 
NC_009712  Mboo_1248  methyl-accepting chemotaxis sensory transducer  40.78 
 
 
981 aa  62.8  0.000000008  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.206477  normal 
 
 
-
 
NC_008345  Sfri_0080  methyl-accepting chemotaxis sensory transducer  48.57 
 
 
636 aa  62.8  0.000000008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_3002  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.39 
 
 
514 aa  63.2  0.000000008  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_011728  BbuZS7_0701  methyl-accepting chemotaxis protein  43.04 
 
 
633 aa  62.8  0.000000009  Borrelia burgdorferi ZS7  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_0347  methyl-accepting chemotaxis sensory transducer  46.07 
 
 
706 aa  62.8  0.000000009  Methanospirillum hungatei JF-1  Archaea  normal  0.765539  normal  0.695737 
 
 
-
 
NC_009485  BBta_0869  putative methyl-accepting chemotaxis receptor/sensory transducer  46.99 
 
 
662 aa  62.8  0.000000009  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.0914748 
 
 
-
 
NC_008322  Shewmr7_3698  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
463 aa  62.8  0.000000009  Shewanella sp. MR-7  Bacteria  normal  0.246306  normal  0.556215 
 
 
-
 
NC_004578  PSPTO_5569  methyl-accepting chemotaxis protein  37.5 
 
 
541 aa  62.4  0.00000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009802  CCC13826_1856  acyl-CoA hydrolase  32.35 
 
 
654 aa  62.4  0.00000001  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_2304  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
468 aa  62.4  0.00000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal  0.816033 
 
 
-
 
NC_010622  Bphy_1275  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
470 aa  62.4  0.00000001  Burkholderia phymatum STM815  Bacteria  normal  normal  0.233006 
 
 
-
 
NC_007517  Gmet_2422  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.35 
 
 
1046 aa  62  0.00000001  Geobacter metallireducens GS-15  Bacteria  normal  0.925436  normal 
 
 
-
 
NC_009436  Ent638_3407  methyl-accepting chemotaxis sensory transducer  46.88 
 
 
545 aa  62.4  0.00000001  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1930  methyl-accepting chemotaxis sensory transducer  38.76 
 
 
517 aa  62.8  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0153757  normal 
 
 
-
 
NC_007778  RPB_1030  methyl-accepting chemotaxis sensory transducer  45.12 
 
 
653 aa  62  0.00000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_007908  Rfer_3119  methyl-accepting chemotaxis sensory transducer  45.83 
 
 
554 aa  62  0.00000001  Rhodoferax ferrireducens T118  Bacteria  normal  0.813886  n/a   
 
 
-
 
NC_007912  Sde_3111  putative methyl-accepting chemotaxis sensory transducer  50.75 
 
 
397 aa  62  0.00000001  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009512  Pput_0601  methyl-accepting chemotaxis sensory transducer  37.8 
 
 
653 aa  62.4  0.00000001  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_3089  methyl-accepting chemotaxis sensory transducer  45.45 
 
 
526 aa  62  0.00000001  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_010322  PputGB1_0607  methyl-accepting chemotaxis sensory transducer  37.01 
 
 
653 aa  62.8  0.00000001  Pseudomonas putida GB-1  Bacteria  normal  normal  0.100705 
 
 
-
 
NC_013174  Jden_0673  methyl-accepting chemotaxis sensory transducer with Cache sensor  46.58 
 
 
533 aa  62.4  0.00000001  Jonesia denitrificans DSM 20603  Bacteria  normal  normal  0.349323 
 
 
-
 
NC_011884  Cyan7425_3745  methyl-accepting chemotaxis sensory transducer  35.61 
 
 
852 aa  62.4  0.00000001  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4229  methyl-accepting chemotaxis sensory transducer  40 
 
 
1150 aa  62.4  0.00000001  Trichodesmium erythraeum IMS101  Bacteria  normal  normal  0.591053 
 
 
-
 
NC_008321  Shewmr4_0326  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
463 aa  62.8  0.00000001  Shewanella sp. MR-4  Bacteria  normal  0.876228  normal 
 
 
-
 
NC_002947  PP_0562  methyl-accepting chemotaxis sensory transducer  37.01 
 
 
653 aa  61.6  0.00000002  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4246  putative methyl-accepting chemotaxis receptor/sensory transducer protein  45 
 
 
689 aa  61.2  0.00000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.456046  normal  0.433672 
 
 
-
 
NC_009715  CCV52592_1409  methyl-accepting chemotaxis protein  33.33 
 
 
655 aa  61.2  0.00000002  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1974  chemotaxis sensory transducer  44.87 
 
 
535 aa  62  0.00000002  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0718  chemotaxis sensory transducer  50.67 
 
 
669 aa  62  0.00000002  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.845917  n/a   
 
 
-
 
NC_011726  PCC8801_0720  methyl-accepting chemotaxis sensory transducer  40.22 
 
 
880 aa  61.2  0.00000002  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011004  Rpal_4118  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
567 aa  61.6  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  44.58 
 
 
560 aa  61.6  0.00000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_011898  Ccel_2237  methyl-accepting chemotaxis sensory transducer  31.03 
 
 
676 aa  61.6  0.00000002  Clostridium cellulolyticum H10  Bacteria  normal  0.479493  n/a   
 
 
-
 
NC_008700  Sama_2528  putative methyl-accepting chemotaxis sensory transducer  44.44 
 
 
665 aa  61.6  0.00000002  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008347  Mmar10_2299  methyl-accepting chemotaxis sensory transducer  44.59 
 
 
182 aa  61.2  0.00000002  Maricaulis maris MCS10  Bacteria  normal  normal  0.741118 
 
 
-
 
NC_011004  Rpal_5172  methyl-accepting chemotaxis sensory transducer  46.67 
 
 
656 aa  62  0.00000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2264  methyl-accepting chemotaxis sensory transducer  37.97 
 
 
604 aa  61.6  0.00000002  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4515  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.45 
 
 
554 aa  61.6  0.00000002  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.328844 
 
 
-
 
NC_007951  Bxe_A1954  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
511 aa  61.6  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  0.249155  normal  0.44726 
 
 
-
 
NC_009485  BBta_4269  putative methyl-accepting chemotaxis receptor/sensory transducer protein  46.67 
 
 
691 aa  62  0.00000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.35374 
 
 
-
 
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