More than 300 homologs were found in PanDaTox collection
for query gene Mext_1975 on replicon NC_010172
Organism: Methylobacterium extorquens PA1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010172  Mext_1975  chemotaxis sensory transducer  100 
 
 
364 aa  728    Methylobacterium extorquens PA1  Bacteria  normal  0.129929  normal 
 
 
-
 
NC_011757  Mchl_2252  methyl-accepting chemotaxis sensory transducer  99.73 
 
 
364 aa  725    Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1930  methyl-accepting chemotaxis sensory transducer  88.05 
 
 
366 aa  580  1.0000000000000001e-165  Methylobacterium populi BJ001  Bacteria  normal  0.702252  normal  0.0243578 
 
 
-
 
NC_010505  Mrad2831_5068  methyl-accepting chemotaxis sensory transducer  63.25 
 
 
371 aa  414  1e-114  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0531667 
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  59.25 
 
 
359 aa  395  1e-109  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  57.06 
 
 
362 aa  385  1e-106  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  61.95 
 
 
361 aa  380  1e-104  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_007925  RPC_4930  methyl-accepting chemotaxis sensory transducer  54.12 
 
 
362 aa  374  1e-102  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226636 
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  56.71 
 
 
345 aa  348  1e-94  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_011757  Mchl_4260  methyl-accepting chemotaxis sensory transducer  56.71 
 
 
352 aa  345  7e-94  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0082  chemotaxis sensory transducer  53.64 
 
 
359 aa  344  1e-93  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_3892  putative methyl-accepting chemotaxis protein  56.71 
 
 
352 aa  344  2e-93  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.344749 
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  51.73 
 
 
362 aa  331  1e-89  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  49.13 
 
 
367 aa  324  2e-87  Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_007643  Rru_A0081  chemotaxis sensory transducer  49.57 
 
 
362 aa  320  3.9999999999999996e-86  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0771  methyl-accepting chemotaxis sensory transducer  50.29 
 
 
409 aa  297  2e-79  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  44.82 
 
 
351 aa  273  4.0000000000000004e-72  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  44.35 
 
 
341 aa  259  5.0000000000000005e-68  Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_011369  Rleg2_0931  methyl-accepting chemotaxis sensory transducer  37.19 
 
 
368 aa  222  7e-57  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.219476  normal  0.828358 
 
 
-
 
NC_012850  Rleg_1080  methyl-accepting chemotaxis sensory transducer  36.64 
 
 
368 aa  217  2.9999999999999998e-55  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011989  Avi_1377  methyl-accepting chemotaxis protein  35.96 
 
 
370 aa  214  9.999999999999999e-55  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  35.34 
 
 
377 aa  185  1.0000000000000001e-45  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.82 
 
 
334 aa  115  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_009715  CCV52592_0520  GntT protein  32.89 
 
 
306 aa  74.7  0.000000000002  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1071  CheW protein  30.93 
 
 
891 aa  71.2  0.00000000002  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007575  Suden_0043  methyl-accepting chemotaxis sensory transducer  32.28 
 
 
421 aa  72  0.00000000002  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0436  methyl-accepting chemotaxis sensory transducer  55.56 
 
 
564 aa  71.6  0.00000000002  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4927  methyl-accepting chemotaxis protein/sensory box protein  38.14 
 
 
511 aa  70.9  0.00000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_2579  methyl-accepting chemotaxis sensory transducer with Cache sensor  36.13 
 
 
678 aa  70.1  0.00000000005  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_0470  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
668 aa  70.5  0.00000000005  Halothiobacillus neapolitanus c2  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_3912  methyl-accepting chemotaxis sensory transducer  45.28 
 
 
713 aa  69.7  0.00000000007  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012039  Cla_1032  MCP-domain signal transduction protein  37.93 
 
 
375 aa  69.7  0.00000000008  Campylobacter lari RM2100  Bacteria  normal  0.60166  n/a   
 
 
-
 
NC_009708  YpsIP31758_1492  methyl-accepting chemotaxis transducer/sensory box protein  45.88 
 
 
434 aa  69.3  0.0000000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.504858  n/a   
 
 
-
 
NC_007005  Psyr_0868  histidine kinase, HAMP region: chemotaxis sensory transducer  40.17 
 
 
546 aa  69.3  0.0000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.872643 
 
 
-
 
NC_009674  Bcer98_0346  methyl-accepting chemotaxis sensory transducer  36.15 
 
 
430 aa  68.9  0.0000000001  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  n/a   
 
 
-
 
NC_007575  Suden_1178  methyl-accepting chemotaxis sensory transducer  42.11 
 
 
530 aa  69.3  0.0000000001  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1597  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  45.88 
 
 
434 aa  68.9  0.0000000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1760  CheW protein  29.19 
 
 
875 aa  68.9  0.0000000001  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A1776  methyl-accepting chemotaxis transducer/sensory box protein  45.88 
 
 
430 aa  69.3  0.0000000001  Yersinia pestis Angola  Bacteria  normal  0.026357  normal  0.201984 
 
 
-
 
NC_011004  Rpal_4791  methyl-accepting chemotaxis sensory transducer  37.5 
 
 
434 aa  68.6  0.0000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_2733  methyl-accepting chemotaxis protein  40.82 
 
 
485 aa  68.2  0.0000000002  Colwellia psychrerythraea 34H  Bacteria  normal  0.501844  n/a   
 
 
-
 
NC_004347  SO_3582  methyl-accepting chemotaxis protein  40.34 
 
 
541 aa  68.6  0.0000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013512  Sdel_0016  chemotaxis sensory transducer  40 
 
 
357 aa  68.2  0.0000000002  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  0.760621  n/a   
 
 
-
 
NC_009253  Dred_1693  methyl-accepting chemotaxis sensory transducer  41.9 
 
 
598 aa  68.6  0.0000000002  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0850375  n/a   
 
 
-
 
NC_007963  Csal_0033  methyl-accepting chemotaxis sensory transducer  42.42 
 
 
593 aa  68.2  0.0000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.684678  n/a   
 
 
-
 
NC_004578  PSPTO_3237  methyl-accepting chemotaxis protein  52.63 
 
 
771 aa  67.4  0.0000000003  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_02969  Methyl-accepting chemotaxis protein  46.34 
 
 
529 aa  67.4  0.0000000003  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0476708  n/a   
 
 
-
 
NC_007912  Sde_1389  putative methyl-accepting chemotaxis sensory transducer  42.27 
 
 
219 aa  67.8  0.0000000003  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_009654  Mmwyl1_4309  methyl-accepting chemotaxis sensory transducer  50 
 
 
628 aa  67.4  0.0000000003  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00619864  normal 
 
 
-
 
NC_008228  Patl_3464  methyl-accepting chemotaxis sensory transducer  38.33 
 
 
525 aa  67.8  0.0000000003  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_2952  methyl-accepting chemotaxis sensory transducer  46.91 
 
 
675 aa  67  0.0000000004  Shewanella baltica OS223  Bacteria  normal  0.11864  normal 
 
 
-
 
NC_009665  Shew185_1386  methyl-accepting chemotaxis sensory transducer  46.91 
 
 
675 aa  67.4  0.0000000004  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1124  methyl-accepting chemotaxis sensory transducer  41.84 
 
 
547 aa  67.4  0.0000000004  Halothiobacillus neapolitanus c2  Bacteria  hitchhiker  0.00163985  n/a   
 
 
-
 
NC_011901  Tgr7_1709  hypothetical protein  26.36 
 
 
668 aa  67  0.0000000004  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009052  Sbal_1402  methyl-accepting chemotaxis sensory transducer  46.91 
 
 
675 aa  67.4  0.0000000004  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0099  chemotaxis sensory transducer  44.94 
 
 
639 aa  67.4  0.0000000004  Shewanella denitrificans OS217  Bacteria  unclonable  0.0000000152719  n/a   
 
 
-
 
NC_009438  Sputcn32_1313  methyl-accepting chemotaxis sensory transducer  47.5 
 
 
675 aa  67  0.0000000005  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009712  Mboo_1099  methyl-accepting chemotaxis sensory transducer  48.1 
 
 
492 aa  67  0.0000000005  Candidatus Methanoregula boonei 6A8  Archaea  normal  0.34192  normal 
 
 
-
 
NC_011663  Sbal223_3274  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
541 aa  67  0.0000000005  Shewanella baltica OS223  Bacteria  normal  0.0175031  normal  0.083895 
 
 
-
 
NC_009715  CCV52592_1409  methyl-accepting chemotaxis protein  37.61 
 
 
655 aa  67  0.0000000005  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1425  methyl-accepting chemotaxis sensory transducer  46.91 
 
 
675 aa  67  0.0000000005  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_1084  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
541 aa  67  0.0000000005  Shewanella baltica OS185  Bacteria  hitchhiker  0.000100295  n/a   
 
 
-
 
NC_009052  Sbal_1015  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
541 aa  67  0.0000000005  Shewanella baltica OS155  Bacteria  unclonable  0.0000000434326  n/a   
 
 
-
 
NC_009997  Sbal195_1117  methyl-accepting chemotaxis sensory transducer  40.34 
 
 
541 aa  67  0.0000000005  Shewanella baltica OS195  Bacteria  normal  0.0100073  normal  0.0339889 
 
 
-
 
NC_009715  CCV52592_0397  methyl-accepting chemotaxis protein  37.61 
 
 
655 aa  67  0.0000000005  Campylobacter curvus 525.92  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_00480  methyl-accepting chemotaxis sensory transducer  45.35 
 
 
676 aa  67  0.0000000005  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013457  VEA_001273  methyl-accepting chemotaxis protein  40.5 
 
 
638 aa  66.6  0.0000000006  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_0473  methyl-accepting chemotaxis protein  39.39 
 
 
365 aa  66.6  0.0000000006  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.614165  n/a   
 
 
-
 
NC_009802  CCC13826_1856  acyl-CoA hydrolase  38.24 
 
 
654 aa  66.6  0.0000000006  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_009456  VC0395_0103  methyl-accepting chemotaxis protein  48.68 
 
 
521 aa  66.6  0.0000000006  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008340  Mlg_1098  methyl-accepting chemotaxis sensory transducer  40.68 
 
 
637 aa  66.6  0.0000000006  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.0167241  normal 
 
 
-
 
NC_009802  CCC13826_1521  methyl-accepting chemotaxis protein  30.57 
 
 
360 aa  66.6  0.0000000006  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1041  methyl-accepting chemotaxis protein  42.72 
 
 
731 aa  66.6  0.0000000006  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.32701  n/a   
 
 
-
 
NC_003909  BCE_0470  methyl-accepting chemotaxis protein, putative  42.31 
 
 
430 aa  66.2  0.0000000007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1557  methyl-accepting chemotaxis sensory transducer  44.32 
 
 
530 aa  66.6  0.0000000007  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_003912  CJE0498  methyl-accepting chemotaxis protein  39.39 
 
 
365 aa  66.6  0.0000000007  Campylobacter jejuni RM1221  Bacteria  normal  0.654005  n/a   
 
 
-
 
NC_011898  Ccel_0493  methyl-accepting chemotaxis sensory transducer  38.53 
 
 
491 aa  66.2  0.0000000007  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_22670  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
737 aa  66.6  0.0000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_009636  Smed_0051  methyl-accepting chemotaxis sensory transducer  44.57 
 
 
796 aa  66.6  0.0000000007  Sinorhizobium medicae WSM419  Bacteria  normal  hitchhiker  0.000000874578 
 
 
-
 
NC_008345  Sfri_2331  methyl-accepting chemotaxis sensory transducer  39.81 
 
 
538 aa  66.2  0.0000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.797541  n/a   
 
 
-
 
NC_008346  Swol_0971  putative methyl-accepting chemotaxis sensory transducer  34.26 
 
 
777 aa  66.6  0.0000000007  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  0.271758  n/a   
 
 
-
 
NC_011830  Dhaf_3311  methyl-accepting chemotaxis sensory transducer with Cache sensor  42.7 
 
 
695 aa  66.6  0.0000000007  Desulfitobacterium hafniense DCB-2  Bacteria  normal  0.0266885  n/a   
 
 
-
 
NC_008599  CFF8240_0511  methyl-accepting chemotaxis protein  47.89 
 
 
361 aa  66.6  0.0000000007  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.737393  n/a   
 
 
-
 
NC_002947  PP_3950  methyl-accepting chemotaxis transducer  47.73 
 
 
725 aa  66.2  0.0000000008  Pseudomonas putida KT2440  Bacteria  normal  normal  0.691578 
 
 
-
 
NC_009512  Pput_1872  methyl-accepting chemotaxis sensory transducer  47.73 
 
 
721 aa  66.2  0.0000000008  Pseudomonas putida F1  Bacteria  normal  normal  0.163736 
 
 
-
 
NC_007575  Suden_1496  methyl-accepting chemotaxis sensory transducer  32.81 
 
 
632 aa  66.2  0.0000000008  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_2995  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
541 aa  66.2  0.0000000008  Shewanella sp. MR-4  Bacteria  hitchhiker  0.00226615  normal  0.196783 
 
 
-
 
NC_008322  Shewmr7_3076  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
541 aa  66.2  0.0000000008  Shewanella sp. MR-7  Bacteria  unclonable  0.0000214454  normal  0.805143 
 
 
-
 
NC_008577  Shewana3_3173  methyl-accepting chemotaxis sensory transducer  39.5 
 
 
541 aa  66.2  0.0000000008  Shewanella sp. ANA-3  Bacteria  normal  0.0131988  normal 
 
 
-
 
NC_009438  Sputcn32_1020  methyl-accepting chemotaxis sensory transducer  41.23 
 
 
541 aa  66.2  0.0000000009  Shewanella putrefaciens CN-32  Bacteria  hitchhiker  0.00762848  n/a   
 
 
-
 
NC_008599  CFF8240_0975  methyl-accepting chemotaxis protein  32.35 
 
 
365 aa  66.2  0.0000000009  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.245078  n/a   
 
 
-
 
NC_009457  VC0395_A2016  methyl-accepting chemotaxis protein  35.83 
 
 
433 aa  65.9  0.000000001  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000104003  n/a   
 
 
-
 
NC_004578  PSPTO_4541  methyl-accepting chemotaxis protein  40.38 
 
 
541 aa  65.9  0.000000001  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.726322  n/a   
 
 
-
 
NC_006274  BCZK0342  methyl-accepting chemotaxis protein  42.31 
 
 
430 aa  65.9  0.000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0469  methyl-accepting chemotaxis protein  42.31 
 
 
430 aa  65.5  0.000000001  Bacillus cereus AH187  Bacteria  normal  0.51819  n/a   
 
 
-
 
NC_009802  CCC13826_0869  glutamine ABC transporter, ATP-binding protein  36.89 
 
 
649 aa  65.9  0.000000001  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_007963  Csal_0905  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  48.78 
 
 
450 aa  65.5  0.000000001  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.716562  n/a   
 
 
-
 
NC_009802  CCC13826_1957  methyl-accepting chemotaxis protein  35.94 
 
 
654 aa  65.5  0.000000001  Campylobacter concisus 13826  Bacteria  normal  n/a   
 
 
-
 
NC_008599  CFF8240_1645  methyl-accepting chemotaxis protein  51.32 
 
 
545 aa  65.5  0.000000001  Campylobacter fetus subsp. fetus 82-40  Bacteria  normal  0.0567442  n/a   
 
 
-
 
NC_011773  BCAH820_0405  methyl-accepting chemotaxis protein  42.31 
 
 
430 aa  65.5  0.000000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
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