More than 300 homologs were found in PanDaTox collection
for query gene Caul_3960 on replicon NC_010338
Organism: Caulobacter sp. K31



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010338  Caul_3960  methyl-accepting chemotaxis sensory transducer  100 
 
 
367 aa  741    Caulobacter sp. K31  Bacteria  normal  0.273719  normal  0.409706 
 
 
-
 
NC_007643  Rru_A0082  chemotaxis sensory transducer  59 
 
 
359 aa  393  1e-108  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0080  chemotaxis sensory transducer  55.26 
 
 
362 aa  372  1e-102  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0081  chemotaxis sensory transducer  53.64 
 
 
362 aa  357  1.9999999999999998e-97  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A0771  methyl-accepting chemotaxis sensory transducer  53.25 
 
 
409 aa  336  3.9999999999999995e-91  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011757  Mchl_4260  methyl-accepting chemotaxis sensory transducer  50.3 
 
 
352 aa  335  1e-90  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_3892  putative methyl-accepting chemotaxis protein  50.61 
 
 
352 aa  333  3e-90  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.344749 
 
 
-
 
NC_009511  Swit_2724  methyl-accepting chemotaxis sensory transducer  51.21 
 
 
341 aa  332  4e-90  Sphingomonas wittichii RW1  Bacteria  normal  0.894036  normal 
 
 
-
 
NC_007778  RPB_0006  methyl-accepting chemotaxis sensory transducer  50.45 
 
 
359 aa  333  4e-90  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.906877  normal 
 
 
-
 
NC_010511  M446_3313  methyl-accepting chemotaxis sensory transducer  48.88 
 
 
361 aa  330  2e-89  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1930  methyl-accepting chemotaxis sensory transducer  49.42 
 
 
366 aa  330  2e-89  Methylobacterium populi BJ001  Bacteria  normal  0.702252  normal  0.0243578 
 
 
-
 
NC_009485  BBta_3999  methyl-accepting chemotaxis sensory transducer  49.25 
 
 
362 aa  328  9e-89  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.80171  normal 
 
 
-
 
NC_010505  Mrad2831_5068  methyl-accepting chemotaxis sensory transducer  48.99 
 
 
371 aa  327  2.0000000000000001e-88  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0531667 
 
 
-
 
NC_007952  Bxe_B1126  methyl-accepting chemotaxis sensory transducer  49.86 
 
 
351 aa  327  3e-88  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_2252  methyl-accepting chemotaxis sensory transducer  49.13 
 
 
364 aa  325  9e-88  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_1975  chemotaxis sensory transducer  49.13 
 
 
364 aa  324  2e-87  Methylobacterium extorquens PA1  Bacteria  normal  0.129929  normal 
 
 
-
 
NC_010725  Mpop_4363  methyl-accepting chemotaxis sensory transducer  51.07 
 
 
345 aa  323  3e-87  Methylobacterium populi BJ001  Bacteria  normal  0.139679  normal  0.610806 
 
 
-
 
NC_007925  RPC_4930  methyl-accepting chemotaxis sensory transducer  48.06 
 
 
362 aa  313  3.9999999999999997e-84  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.226636 
 
 
-
 
NC_011989  Avi_1377  methyl-accepting chemotaxis protein  38.72 
 
 
370 aa  246  4e-64  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_014148  Plim_2343  methyl-accepting chemotaxis sensory transducer  37.9 
 
 
377 aa  226  4e-58  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1080  methyl-accepting chemotaxis sensory transducer  39.94 
 
 
368 aa  219  6e-56  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_0931  methyl-accepting chemotaxis sensory transducer  40.32 
 
 
368 aa  218  8.999999999999998e-56  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.219476  normal  0.828358 
 
 
-
 
NC_011830  Dhaf_1064  methyl-accepting chemotaxis sensory transducer with Cache sensor  28.69 
 
 
334 aa  126  5e-28  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007947  Mfla_1760  CheW protein  30.25 
 
 
875 aa  95.5  1e-18  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_1709  hypothetical protein  26.47 
 
 
668 aa  77.8  0.0000000000003  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_0470  CheW protein  28.99 
 
 
848 aa  72.8  0.000000000008  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_1071  CheW protein  31.38 
 
 
891 aa  72.4  0.00000000001  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
NC_007520  Tcr_2145  hypothetical protein  22.85 
 
 
692 aa  70.5  0.00000000004  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A2970  CheW protein  25.38 
 
 
841 aa  68.6  0.0000000002  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_011146  Gbem_2028  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
626 aa  60.8  0.00000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_012029  Hlac_1861  methyl-accepting chemotaxis sensory transducer  36.09 
 
 
505 aa  60.8  0.00000004  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.876271  normal  0.0686016 
 
 
-
 
NC_012918  GM21_2191  methyl-accepting chemotaxis sensory transducer  43.37 
 
 
618 aa  59.7  0.00000008  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_007778  RPB_3522  methyl-accepting chemotaxis sensory transducer  50.75 
 
 
471 aa  58.9  0.0000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.392623  normal  0.542302 
 
 
-
 
NC_010511  M446_4388  methyl-accepting chemotaxis sensory transducer  40.59 
 
 
553 aa  59.3  0.0000001  Methylobacterium sp. 4-46  Bacteria  normal  0.789001  normal 
 
 
-
 
NC_007925  RPC_4104  methyl-accepting chemotaxis sensory transducer  34.51 
 
 
586 aa  57.8  0.0000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.783692  normal 
 
 
-
 
NC_007298  Daro_0724  chemotaxis sensory transducer  37.8 
 
 
405 aa  57.4  0.0000004  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.435605 
 
 
-
 
NC_007643  Rru_A0441  chemotaxis sensory transducer  52.7 
 
 
653 aa  57  0.0000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.636586  n/a   
 
 
-
 
NC_009485  BBta_2843  putative histidine kinase, HAMP region  37.76 
 
 
682 aa  57  0.0000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_4931  putative methyl-accepting chemotaxis protein  41.38 
 
 
567 aa  56.6  0.0000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_5144  methyl-accepting chemotaxis sensory transducer  41.49 
 
 
686 aa  56.6  0.0000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0851  methyl-accepting chemotaxis sensory transducer  40.74 
 
 
765 aa  56.6  0.0000007  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1316  methyl-accepting chemotaxis sensory transducer  44.44 
 
 
561 aa  56.2  0.0000009  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.234166 
 
 
-
 
NC_010505  Mrad2831_4648  methyl-accepting chemotaxis sensory transducer  35.77 
 
 
414 aa  56.2  0.0000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.087359 
 
 
-
 
NC_013522  Taci_0283  methyl-accepting chemotaxis sensory transducer  39.36 
 
 
420 aa  55.8  0.000001  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2142  chemotaxis sensory transducer  47.89 
 
 
485 aa  56.2  0.000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.913204  n/a   
 
 
-
 
NC_007643  Rru_A3513  chemotaxis sensory transducer  37.86 
 
 
585 aa  55.5  0.000001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1317  methyl-accepting chemotaxis sensory transducer  41.86 
 
 
560 aa  55.8  0.000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.14669 
 
 
-
 
NC_007925  RPC_4661  methyl-accepting chemotaxis sensory transducer  37.25 
 
 
440 aa  55.8  0.000001  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.224598 
 
 
-
 
NC_013440  Hoch_3254  methyl-accepting chemotaxis sensory transducer  41.12 
 
 
612 aa  56.2  0.000001  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0159313  normal  0.0166963 
 
 
-
 
NC_009656  PSPA7_0260  putative chemotaxis transducer  39.56 
 
 
391 aa  55.5  0.000002  Pseudomonas aeruginosa PA7  Bacteria  normal  0.237341  n/a   
 
 
-
 
NC_011757  Mchl_5156  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
665 aa  55.5  0.000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal  0.0636207 
 
 
-
 
NC_010725  Mpop_5234  methyl-accepting chemotaxis sensory transducer  46.84 
 
 
643 aa  55.1  0.000002  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2709  methyl-accepting chemotaxis sensory transducer  42.17 
 
 
537 aa  54.7  0.000002  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1414  methyl-accepting chemotaxis sensory transducer  39.77 
 
 
440 aa  55.1  0.000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0801097  normal 
 
 
-
 
NC_009485  BBta_6993  putative methyl-accepting chemotaxis receptor/sensory transducer  39.51 
 
 
697 aa  55.1  0.000002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_008786  Veis_3018  methyl-accepting chemotaxis sensory transducer  31.79 
 
 
767 aa  55.1  0.000002  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.238689  normal  0.701163 
 
 
-
 
NC_010511  M446_0525  methyl-accepting chemotaxis sensory transducer  46.58 
 
 
663 aa  55.1  0.000002  Methylobacterium sp. 4-46  Bacteria  normal  hitchhiker  0.00859167 
 
 
-
 
NC_011004  Rpal_4788  methyl-accepting chemotaxis sensory transducer  38.46 
 
 
561 aa  55.1  0.000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010172  Mext_4691  chemotaxis sensory transducer  46.84 
 
 
665 aa  55.5  0.000002  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_1394  chemotaxis sensory transducer  38.64 
 
 
444 aa  55.1  0.000002  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_010505  Mrad2831_1828  methyl-accepting chemotaxis sensory transducer  42.86 
 
 
579 aa  55.5  0.000002  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0132835 
 
 
-
 
NC_008789  Hhal_0534  methyl-accepting chemotaxis sensory transducer  43.48 
 
 
439 aa  54.7  0.000002  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4465  methyl-accepting chemotaxis sensory transducer  41.38 
 
 
532 aa  55.5  0.000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.857744  normal  0.045525 
 
 
-
 
NC_013223  Dret_1269  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  41.67 
 
 
700 aa  55.1  0.000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.484624  normal  0.151355 
 
 
-
 
NC_011898  Ccel_0496  methyl-accepting chemotaxis sensory transducer  31.16 
 
 
414 aa  54.3  0.000003  Clostridium cellulolyticum H10  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A2146  methyl-accepting chemotaxis sensory transducer  56.25 
 
 
485 aa  54.7  0.000003  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2054  methyl-accepting chemotaxis sensory transducer  40.91 
 
 
665 aa  54.7  0.000003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_010725  Mpop_2766  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
457 aa  54.7  0.000003  Methylobacterium populi BJ001  Bacteria  normal  normal  0.626967 
 
 
-
 
NC_007925  RPC_4105  methyl-accepting chemotaxis sensory transducer  43.06 
 
 
561 aa  54.3  0.000003  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.916882  normal 
 
 
-
 
NC_011992  Dtpsy_2898  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
754 aa  54.3  0.000003  Acidovorax ebreus TPSY  Bacteria  normal  0.0204496  n/a   
 
 
-
 
NC_009664  Krad_1930  methyl-accepting chemotaxis sensory transducer  36.36 
 
 
517 aa  54.7  0.000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0153757  normal 
 
 
-
 
NC_008577  Shewana3_2987  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  29.08 
 
 
522 aa  54.3  0.000003  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1374  methyl-accepting chemotaxis protein  33.59 
 
 
541 aa  54.3  0.000004  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_011369  Rleg2_3260  methyl-accepting chemotaxis sensory transducer  35.64 
 
 
602 aa  54.3  0.000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0582253  normal  0.204929 
 
 
-
 
NC_009485  BBta_7334  putative methyl-accepting chemotaxis protein  34.74 
 
 
685 aa  53.9  0.000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.382599  normal 
 
 
-
 
NC_008782  Ajs_3575  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
754 aa  53.9  0.000004  Acidovorax sp. JS42  Bacteria  normal  0.946853  normal  0.162427 
 
 
-
 
NC_010172  Mext_4764  chemotaxis sensory transducer  50 
 
 
416 aa  53.9  0.000004  Methylobacterium extorquens PA1  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3904  chemotaxis sensory transducer  44.44 
 
 
566 aa  53.9  0.000004  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4787  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
561 aa  53.9  0.000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.708956  n/a   
 
 
-
 
NC_009485  BBta_7506  putative methyl-accepting chemotaxis protein  43.37 
 
 
671 aa  53.9  0.000004  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_011757  Mchl_5231  methyl-accepting chemotaxis sensory transducer  50 
 
 
416 aa  53.9  0.000004  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.544234  normal  0.123182 
 
 
-
 
NC_011004  Rpal_4974  methyl-accepting chemotaxis sensory transducer  43.21 
 
 
440 aa  53.9  0.000004  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.178259  n/a   
 
 
-
 
NC_010505  Mrad2831_1998  methyl-accepting chemotaxis sensory transducer  44.3 
 
 
225 aa  53.9  0.000004  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.526188  normal  0.663186 
 
 
-
 
NC_010172  Mext_2643  chemotaxis sensory transducer  47.06 
 
 
457 aa  53.9  0.000004  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.861208 
 
 
-
 
NC_009456  VC0395_0155  methyl-accepting chemotaxis protein  39.47 
 
 
384 aa  53.5  0.000005  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_007643  Rru_A0262  chemotaxis sensory transducer  43.16 
 
 
442 aa  53.9  0.000005  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.244306  n/a   
 
 
-
 
NC_011757  Mchl_2869  methyl-accepting chemotaxis sensory transducer  47.06 
 
 
457 aa  53.9  0.000005  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.394576  normal 
 
 
-
 
NC_011004  Rpal_4271  methyl-accepting chemotaxis sensory transducer  34 
 
 
567 aa  53.5  0.000005  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_1014  methyl-accepting chemotaxis sensory transducer  39.13 
 
 
482 aa  53.9  0.000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1216  methyl-accepting chemotaxis sensory transducer  45.21 
 
 
562 aa  53.9  0.000005  Methylobacterium populi BJ001  Bacteria  normal  0.743011  normal  0.567814 
 
 
-
 
NC_008340  Mlg_1153  methyl-accepting chemotaxis sensory transducer  43.04 
 
 
474 aa  53.9  0.000005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_0904  methyl-accepting chemotaxis sensory transducer  33.87 
 
 
745 aa  53.5  0.000005  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.405383 
 
 
-
 
NC_007298  Daro_0837  histidine kinase, HAMP region: chemotaxis sensory transducer  31.82 
 
 
680 aa  53.5  0.000006  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.0272085 
 
 
-
 
NC_007643  Rru_A2333  chemotaxis sensory transducer  42.86 
 
 
461 aa  53.5  0.000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1072  methyl-accepting chemotaxis sensory transducer  38.75 
 
 
411 aa  53.5  0.000006  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_010172  Mext_0495  diguanylate cyclase  25.64 
 
 
574 aa  53.5  0.000006  Methylobacterium extorquens PA1  Bacteria  normal  0.355875  normal 
 
 
-
 
NC_009485  BBta_0644  putative methyl-accepting chemotaxis receptor/sensory transducer  42.05 
 
 
565 aa  53.5  0.000006  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_007643  Rru_A0158  methyl-accepting chemotaxis sensory transducer  40.7 
 
 
561 aa  53.1  0.000007  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0608  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  40.28 
 
 
562 aa  53.1  0.000007  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.729764  normal 
 
 
-
 
NC_010514  Mrad2831_6358  methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor  35.16 
 
 
490 aa  53.1  0.000007  Methylobacterium radiotolerans JCM 2831  Bacteria  n/a    n/a   
 
 
-
 
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