Gene Dhaf_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDhaf_1064 
Symbol 
ID7258032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfitobacterium hafniense DCB-2 
KingdomBacteria 
Replicon accessionNC_011830 
Strand
Start bp1158902 
End bp1159906 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content44% 
IMG OID643560978 
Productmethyl-accepting chemotaxis sensory transducer with Cache sensor 
Protein accessionYP_002457560 
Protein GI219667125 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGTAA ATGAATTAAG CATCGATGCC TCAATTCTGT TGGTCGAATT GAAAGAAGCA 
AACCAAAACA TGGGGAAAGT GATCGAATCC ATCCAAGAGG TTGCTAAGCA TACCAACCTG
CTGTCTTTAA ATTCTGCCAT AGAAGCGGCC AGAGCGGGAG AAGCAGGGCG AGGATTCCGT
GTGGTGGCTG ATGAGATTAA GAAGCTGGCT ACCCGGAGCT TGGCCTCAAC CAAGGAAAGT
ACTCAAATCG TCGAGAATAT CCAGATTAAG GCCAATGAAG TTATGGCAGT GCGGACAGCC
GATGTGGCCT ATGATACCAT AGACAAAATC GATCGCAATC TATTCGAGCG GAATTGTGAT
GCCCAAGCCT GGGCAAGATT TGATAAGGTC AAGCATTGTT TTCTCGCAGA CGATCCTCAG
CGGATCGCCG CATGCAATAC TTTATTGAAA TCCCTTGTCG AGATTTATGA AGTTTACATA
GATCTTTATG TATTGGATCC GGAAGGAACC ATTGTATCGG CAGGAGTCCA TACAGAACTC
ATCGGCAAGA ATTTCGCCGA TAAACCTTGG TTTATCGAAG CCAAGGCAGC CAATGCTATT
TCTGTAAGCG ATCTCTATTT ATCCCCTTTG GAAAACCGCT ATACAGTAGC CTACACATGC
CCGATTGTCA GTGACGAGGG AGAGGTTTTA GGTTATTTCT CCACCCGTTT TAATTGGGAT
TTTATCTATG ATATCATCGA CAGTGCCCGG ATTGGGAAAA ATGGAGAAGT TTATGTCCTA
AACAAAGAAG GCTATGTGAT AGCCAGCCGT AATCGCAAAG GAGTTCTTAA AGATAATCTT
AAACATTTAG AGGCTGCCAG GCGGGCCATT AACGGAGAGA CCTATGGATT TCTCTTTGAG
AATAACGGTC AAAAGAGCAC GAAAATTTAT GGTTATGCTC ATACCAGAGG TTATAATGCT
TATCAGGGGA AGAATTGGTC AGCTCTAATC TGTGAAACGA TCTAA
 
Protein sequence
MKVNELSIDA SILLVELKEA NQNMGKVIES IQEVAKHTNL LSLNSAIEAA RAGEAGRGFR 
VVADEIKKLA TRSLASTKES TQIVENIQIK ANEVMAVRTA DVAYDTIDKI DRNLFERNCD
AQAWARFDKV KHCFLADDPQ RIAACNTLLK SLVEIYEVYI DLYVLDPEGT IVSAGVHTEL
IGKNFADKPW FIEAKAANAI SVSDLYLSPL ENRYTVAYTC PIVSDEGEVL GYFSTRFNWD
FIYDIIDSAR IGKNGEVYVL NKEGYVIASR NRKGVLKDNL KHLEAARRAI NGETYGFLFE
NNGQKSTKIY GYAHTRGYNA YQGKNWSALI CETI