More than 300 homologs were found in PanDaTox collection
for query gene Strop_0722 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_0722  short-chain dehydrogenase/reductase SDR  100 
 
 
284 aa  572  1.0000000000000001e-162  Salinispora tropica CNB-440  Bacteria  normal  normal  0.182055 
 
 
-
 
NC_009953  Sare_0668  short-chain dehydrogenase/reductase SDR  83.39 
 
 
288 aa  463  1e-129  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.512596 
 
 
-
 
NC_008541  Arth_1067  short-chain dehydrogenase/reductase SDR  44.24 
 
 
279 aa  189  2.9999999999999997e-47  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0363  oxidoreductase, short chain dehydrogenase/reductase family  45.21 
 
 
273 aa  188  1e-46  Streptosporangium roseum DSM 43021  Bacteria  normal  0.177062  normal 
 
 
-
 
NC_014165  Tbis_0157  short-chain dehydrogenase/reductase SDR  44.07 
 
 
269 aa  172  7.999999999999999e-42  Thermobispora bispora DSM 43833  Bacteria  normal  0.290105  normal 
 
 
-
 
NC_011831  Cagg_0860  short-chain dehydrogenase/reductase SDR  40.49 
 
 
287 aa  166  2.9999999999999998e-40  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.943731  normal  0.246629 
 
 
-
 
NC_013441  Gbro_4116  short-chain dehydrogenase/reductase SDR  40 
 
 
276 aa  165  5.9999999999999996e-40  Gordonia bronchialis DSM 43247  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_09140  short-chain dehydrogenase of unknown substrate specificity  44 
 
 
272 aa  165  1.0000000000000001e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.334901 
 
 
-
 
NC_011886  Achl_1137  short-chain dehydrogenase/reductase SDR  44.29 
 
 
273 aa  164  2.0000000000000002e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00939747 
 
 
-
 
NC_013169  Ksed_05400  short-chain dehydrogenase of unknown substrate specificity  41.22 
 
 
274 aa  159  4e-38  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5553  short-chain dehydrogenase/reductase SDR  40.79 
 
 
278 aa  158  8e-38  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_5172  short-chain dehydrogenase/reductase SDR  40.43 
 
 
278 aa  157  2e-37  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_5261  short-chain dehydrogenase/reductase SDR  40.43 
 
 
278 aa  157  2e-37  Mycobacterium sp. KMS  Bacteria  normal  0.362056  normal 
 
 
-
 
NC_009523  RoseRS_0015  short-chain dehydrogenase/reductase SDR  38.54 
 
 
288 aa  154  2e-36  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.725179 
 
 
-
 
NC_009523  RoseRS_4028  short-chain dehydrogenase/reductase SDR  37.28 
 
 
292 aa  153  2.9999999999999998e-36  Roseiflexus sp. RS-1  Bacteria  normal  0.251041  normal 
 
 
-
 
NC_013440  Hoch_2073  short-chain dehydrogenase/reductase SDR  46.74 
 
 
292 aa  151  1e-35  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4196  short-chain dehydrogenase/reductase SDR  43.48 
 
 
288 aa  150  2e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.685413  normal  0.0812429 
 
 
-
 
NC_013202  Hmuk_0868  short-chain dehydrogenase/reductase SDR  40.65 
 
 
282 aa  150  3e-35  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.178945  normal  0.215411 
 
 
-
 
NC_012029  Hlac_1920  short-chain dehydrogenase/reductase SDR  43.11 
 
 
290 aa  145  6e-34  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.108282  normal 
 
 
-
 
NC_009972  Haur_3830  short-chain dehydrogenase/reductase SDR  37.45 
 
 
285 aa  142  5e-33  Herpetosiphon aurantiacus ATCC 23779  Bacteria  unclonable  0.000000468983  n/a   
 
 
-
 
NC_013739  Cwoe_1065  short-chain dehydrogenase/reductase SDR  37.85 
 
 
312 aa  139  3.9999999999999997e-32  Conexibacter woesei DSM 14684  Bacteria  normal  0.334573  normal  0.72801 
 
 
-
 
NC_010725  Mpop_3355  short-chain dehydrogenase/reductase SDR  38.85 
 
 
286 aa  138  1e-31  Methylobacterium populi BJ001  Bacteria  normal  0.886848  normal 
 
 
-
 
NC_013235  Namu_0625  short-chain dehydrogenase/reductase SDR  39.31 
 
 
326 aa  136  4e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_3678  short-chain dehydrogenase/reductase SDR  37.63 
 
 
292 aa  135  5e-31  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0772847  normal  0.304058 
 
 
-
 
NC_013093  Amir_5862  short-chain dehydrogenase/reductase SDR  38.7 
 
 
297 aa  135  7.000000000000001e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_3350  short-chain dehydrogenase/reductase SDR  40.19 
 
 
314 aa  134  1.9999999999999998e-30  Actinosynnema mirum DSM 43827  Bacteria  normal  0.244541  n/a   
 
 
-
 
NC_013947  Snas_3223  short-chain dehydrogenase/reductase SDR  40.36 
 
 
298 aa  134  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.928112  hitchhiker  0.00000218148 
 
 
-
 
NC_010172  Mext_3159  short-chain dehydrogenase/reductase SDR  38.49 
 
 
281 aa  133  3.9999999999999996e-30  Methylobacterium extorquens PA1  Bacteria  normal  0.244285  normal 
 
 
-
 
NC_011757  Mchl_3483  short-chain dehydrogenase/reductase SDR  37.18 
 
 
281 aa  132  9e-30  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.624143  normal 
 
 
-
 
NC_009485  BBta_7223  Short-chain dehydrogenase/reductase SDR  40.51 
 
 
274 aa  131  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.109906  normal 
 
 
-
 
NC_009077  Mjls_0587  short chain dehydrogenase  40.98 
 
 
306 aa  130  3e-29  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_013158  Huta_2984  short-chain dehydrogenase/reductase SDR  32.76 
 
 
324 aa  128  8.000000000000001e-29  Halorhabdus utahensis DSM 12940  Archaea  normal  0.627737  n/a   
 
 
-
 
NC_012791  Vapar_1638  short-chain dehydrogenase/reductase SDR  38.34 
 
 
295 aa  129  8.000000000000001e-29  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3758  short-chain dehydrogenase/reductase SDR  37.46 
 
 
284 aa  128  1.0000000000000001e-28  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.0168044 
 
 
-
 
NC_012029  Hlac_1313  short-chain dehydrogenase/reductase SDR  33.66 
 
 
320 aa  127  2.0000000000000002e-28  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  normal  0.435553 
 
 
-
 
NC_010831  Cphamn1_0763  short chain dehydrogenase  34.34 
 
 
316 aa  127  2.0000000000000002e-28  Chlorobium phaeobacteroides BS1  Bacteria  normal  0.920637  normal  0.460734 
 
 
-
 
NC_009973  Haur_5203  short-chain dehydrogenase/reductase SDR  33.45 
 
 
289 aa  125  6e-28  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1809  short-chain dehydrogenase/reductase SDR  44.44 
 
 
278 aa  125  1e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.207273  n/a   
 
 
-
 
NC_008146  Mmcs_0596  short chain dehydrogenase  39.85 
 
 
306 aa  123  3e-27  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0609  short chain dehydrogenase  39.85 
 
 
306 aa  123  3e-27  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008025  Dgeo_1140  short-chain dehydrogenase/reductase SDR  38.08 
 
 
277 aa  122  5e-27  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.0331463  normal  0.0268601 
 
 
-
 
NC_013743  Htur_0520  short-chain dehydrogenase/reductase SDR  35.91 
 
 
317 aa  122  6e-27  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011666  Msil_3314  short-chain dehydrogenase/reductase SDR  33.11 
 
 
320 aa  120  3e-26  Methylocella silvestris BL2  Bacteria  n/a    normal  0.0167098 
 
 
-
 
NC_013510  Tcur_1813  short-chain dehydrogenase/reductase SDR  36.79 
 
 
301 aa  119  3.9999999999999996e-26  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.000491998  n/a   
 
 
-
 
NC_013595  Sros_3312  short-chain dehydrogenase/reductase SDR  39.65 
 
 
290 aa  119  3.9999999999999996e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.113909 
 
 
-
 
NC_010338  Caul_4436  short-chain dehydrogenase/reductase SDR  33.99 
 
 
326 aa  119  4.9999999999999996e-26  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_2094  short-chain dehydrogenase/reductase SDR  32.45 
 
 
322 aa  119  6e-26  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.26328  normal  0.398139 
 
 
-
 
NC_014210  Ndas_2106  short-chain dehydrogenase/reductase SDR  37.59 
 
 
298 aa  119  6e-26  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0407655  normal 
 
 
-
 
NC_009921  Franean1_3365  short-chain dehydrogenase/reductase SDR  37.19 
 
 
296 aa  118  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS05496  putative oxidoreductase protein  36.49 
 
 
306 aa  118  9.999999999999999e-26  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.58284 
 
 
-
 
NC_008146  Mmcs_4252  short-chain dehydrogenase/reductase SDR  37.59 
 
 
289 aa  118  9.999999999999999e-26  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_4338  short-chain dehydrogenase/reductase SDR  37.59 
 
 
289 aa  118  9.999999999999999e-26  Mycobacterium sp. KMS  Bacteria  normal  0.582042  normal  0.314505 
 
 
-
 
NC_009921  Franean1_0077  short-chain dehydrogenase/reductase SDR  35.38 
 
 
271 aa  118  9.999999999999999e-26  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_0596  short chain dehydrogenase  41.5 
 
 
300 aa  118  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_4631  short-chain dehydrogenase/reductase SDR  37.59 
 
 
289 aa  118  9.999999999999999e-26  Mycobacterium sp. JLS  Bacteria  normal  0.79705  normal  0.423189 
 
 
-
 
NC_009075  BURPS668_A0856  dehydrogenase  34.62 
 
 
333 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 668  Bacteria  normal  0.944789  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0766  dehydrogenase  34.62 
 
 
329 aa  117  1.9999999999999998e-25  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1583  short-chain dehydrogenase/reductase SDR  34.95 
 
 
349 aa  117  3e-25  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.216927  normal  0.0361789 
 
 
-
 
NC_012880  Dd703_1598  short-chain dehydrogenase/reductase SDR  36.36 
 
 
306 aa  116  3.9999999999999997e-25  Dickeya dadantii Ech703  Bacteria  normal  0.0639963  n/a   
 
 
-
 
NC_009355  OSTLU_5468  predicted protein  34.35 
 
 
292 aa  116  3.9999999999999997e-25  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2134  short chain dehydrogenase/reductase family oxidoreductase  34.62 
 
 
329 aa  116  5e-25  Burkholderia pseudomallei 1710b  Bacteria  normal  0.331088  n/a   
 
 
-
 
NC_007925  RPC_2983  short-chain dehydrogenase/reductase SDR  36.46 
 
 
291 aa  116  5e-25  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.888321  normal  0.289512 
 
 
-
 
NC_008146  Mmcs_0605  short chain dehydrogenase  41 
 
 
300 aa  116  5e-25  Mycobacterium sp. MCS  Bacteria  normal  0.140006  n/a   
 
 
-
 
NC_008705  Mkms_0618  short chain dehydrogenase  41 
 
 
300 aa  116  5e-25  Mycobacterium sp. KMS  Bacteria  normal  0.673408  normal 
 
 
-
 
NC_009338  Mflv_1940  short-chain dehydrogenase/reductase SDR  41 
 
 
288 aa  115  6e-25  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.944669 
 
 
-
 
NC_013131  Caci_2613  short-chain dehydrogenase/reductase SDR  41.52 
 
 
298 aa  114  1.0000000000000001e-24  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.68402  normal 
 
 
-
 
NC_009338  Mflv_0151  short chain dehydrogenase  39.6 
 
 
305 aa  114  1.0000000000000001e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1842  short chain dehydrogenase/reductase family oxidoreductase  33.44 
 
 
328 aa  114  2.0000000000000002e-24  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_0032  short chain dehydrogenase  37.93 
 
 
300 aa  114  2.0000000000000002e-24  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.249754  normal 
 
 
-
 
NC_011004  Rpal_0589  short-chain dehydrogenase/reductase SDR  34.28 
 
 
297 aa  114  2.0000000000000002e-24  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.580908  n/a   
 
 
-
 
NC_009338  Mflv_0143  short chain dehydrogenase  36.6 
 
 
303 aa  113  3e-24  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_0964  short-chain dehydrogenase/reductase SDR  35.05 
 
 
298 aa  113  5e-24  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.468031  normal 
 
 
-
 
NC_013595  Sros_5377  putative retinol dehydrogenase  33.69 
 
 
296 aa  112  7.000000000000001e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.637386  normal  0.0926246 
 
 
-
 
NC_009051  Memar_1150  short-chain dehydrogenase/reductase SDR  33.7 
 
 
281 aa  112  9e-24  Methanoculleus marisnigri JR1  Archaea  normal  n/a   
 
 
-
 
NC_012669  Bcav_4174  short chain dehydrogenase  36.57 
 
 
312 aa  111  1.0000000000000001e-23  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.865375  normal 
 
 
-
 
NC_013922  Nmag_2915  short-chain dehydrogenase/reductase SDR  32.89 
 
 
326 aa  112  1.0000000000000001e-23  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009664  Krad_2779  short-chain dehydrogenase/reductase SDR  36.11 
 
 
292 aa  110  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0384845  normal  0.402092 
 
 
-
 
NC_013730  Slin_0197  short-chain dehydrogenase/reductase SDR  32.38 
 
 
280 aa  110  2.0000000000000002e-23  Spirosoma linguale DSM 74  Bacteria  normal  0.824425  normal 
 
 
-
 
NC_009921  Franean1_6815  short-chain dehydrogenase/reductase SDR  37.44 
 
 
312 aa  110  2.0000000000000002e-23  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2789  short chain dehydrogenase  41.58 
 
 
304 aa  111  2.0000000000000002e-23  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.625532  normal  0.190884 
 
 
-
 
NC_013202  Hmuk_0399  short-chain dehydrogenase/reductase SDR  39.23 
 
 
315 aa  111  2.0000000000000002e-23  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.118358 
 
 
-
 
NC_008726  Mvan_4786  short-chain dehydrogenase/reductase SDR  40.5 
 
 
288 aa  110  2.0000000000000002e-23  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_011059  Paes_0665  short chain dehydrogenase  41.53 
 
 
301 aa  110  2.0000000000000002e-23  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000125417  hitchhiker  0.00844242 
 
 
-
 
NC_009565  TBFG_10068  short chain dehydrogenase  41.35 
 
 
303 aa  110  4.0000000000000004e-23  Mycobacterium tuberculosis F11  Bacteria  normal  normal  0.362569 
 
 
-
 
NC_012850  Rleg_1053  oxidoreductase  32.78 
 
 
319 aa  110  4.0000000000000004e-23  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.176111  normal 
 
 
-
 
NC_011365  Gdia_1049  short-chain dehydrogenase/reductase SDR  32.13 
 
 
326 aa  110  4.0000000000000004e-23  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_10444  short chain dehydrogenase  42.78 
 
 
311 aa  109  4.0000000000000004e-23  Mycobacterium tuberculosis F11  Bacteria  normal  0.270892  normal 
 
 
-
 
NC_010581  Bind_0326  short-chain dehydrogenase/reductase SDR  32.24 
 
 
325 aa  108  7.000000000000001e-23  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.167691 
 
 
-
 
NC_013093  Amir_1341  short-chain dehydrogenase/reductase SDR  34.01 
 
 
307 aa  108  9.000000000000001e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0989891  n/a   
 
 
-
 
NC_007778  RPB_3188  short-chain dehydrogenase/reductase SDR  35.27 
 
 
309 aa  108  9.000000000000001e-23  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_0545  short-chain dehydrogenase/reductase SDR  28.99 
 
 
340 aa  108  1e-22  Fervidobacterium nodosum Rt17-B1  Bacteria  hitchhiker  0.00109277  n/a   
 
 
-
 
NC_009077  Mjls_4015  short-chain dehydrogenase/reductase SDR  33.7 
 
 
271 aa  108  1e-22  Mycobacterium sp. JLS  Bacteria  normal  0.196171  normal 
 
 
-
 
NC_013131  Caci_1016  short-chain dehydrogenase/reductase SDR  32.69 
 
 
324 aa  107  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.010862 
 
 
-
 
NC_013131  Caci_1546  short-chain dehydrogenase/reductase SDR  36.18 
 
 
305 aa  107  2e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0325177 
 
 
-
 
NC_013093  Amir_4942  short-chain dehydrogenase/reductase SDR  36.18 
 
 
335 aa  107  2e-22  Actinosynnema mirum DSM 43827  Bacteria  decreased coverage  0.000012318  n/a   
 
 
-
 
NC_011145  AnaeK_2445  short-chain dehydrogenase/reductase SDR  34.24 
 
 
313 aa  106  4e-22  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_3573  short-chain dehydrogenase/reductase SDR  43.35 
 
 
298 aa  105  7e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0762  short chain dehydrogenase  38.46 
 
 
302 aa  105  7e-22  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.812053  normal  0.782214 
 
 
-
 
NC_007794  Saro_2767  short-chain dehydrogenase/reductase SDR  31.46 
 
 
327 aa  104  1e-21  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_011365  Gdia_1453  short-chain dehydrogenase/reductase SDR  32.79 
 
 
323 aa  105  1e-21  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
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