Gene Ksed_05400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagKsed_05400 
Symbol 
ID8372049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameKytococcus sedentarius DSM 20547 
KingdomBacteria 
Replicon accessionNC_013169 
Strand
Start bp533666 
End bp534490 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content66% 
IMG OID644990829 
Productshort-chain dehydrogenase of unknown substrate specificity 
Protein accessionYP_003148372 
Protein GI256824412 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACGA TCGTCATCAC CGGAGCCAGT GACGGCATCG GCGCGGCAGC CAGCCGACAG 
CTCGCGGAGA CCGGCGCACG GCTGATCCTC GTAGGGCGTT CGCCGGAGAA GACCAGCGCG
GTCGCCGCCG CCACCGGTGC CGAGCACTAT GTCGCCGACT TCGCCAGGCT CGACGACGTA
CGCCGCCTCG CCGGCGAGCT GAACGAGGTC TGCGAGCGGA TCGACGTGCT GGCGAACAAC
GCGGGCGGCA TGTTCTCCGG ACCGACAGTC ACCCAGGACG GCTTCGAGAA GACCTTCCAG
ATCAACCACC TCGCCCCGTA TCTGCTCACG CACCTGCTGA TCGACAAGTT GCTCGACAGC
CGCGCGGCCG TTGTCAACAC CTCCAGCATC GGCGCGAGAC TGTTCGGCCA CATCGACCTC
GAGGACCTGA ACAACTGGGA GGGGTTCTCA CCGAACAAGG CCTATGGCGA CGCCAAGCTC
GCCAACATCC TGTTCACCAA GGAGCTGCAC GAGCGCTTCC ACGGCCGGGG CCTCTCCTCA
GTCGCATTCC ATCCTGGCAA TGTCGCGACG AACTTCGCCT CGGACACAGA CAGCTACTTC
CAACGCGTCT ACCACGGCGC GCTCAGGGCG TTCCTGATCT CCCCAGAGCA GGGAGGAGCA
CGCCTGCGGC ACTTCATCGA GGGTCAACCG GGCCGGGCGT GGACATCGGG GGAGTACTAC
GGTGCACCGG GCCGGATCGG CCGCACGAAC AGGCAGGCCT ACGACGCCGG TATCGCGGTT
GAGCACTGGC GGCGAAGCGC GGCCATGCTC AGCATCGACT GGTGA
 
Protein sequence
MRTIVITGAS DGIGAAASRQ LAETGARLIL VGRSPEKTSA VAAATGAEHY VADFARLDDV 
RRLAGELNEV CERIDVLANN AGGMFSGPTV TQDGFEKTFQ INHLAPYLLT HLLIDKLLDS
RAAVVNTSSI GARLFGHIDL EDLNNWEGFS PNKAYGDAKL ANILFTKELH ERFHGRGLSS
VAFHPGNVAT NFASDTDSYF QRVYHGALRA FLISPEQGGA RLRHFIEGQP GRAWTSGEYY
GAPGRIGRTN RQAYDAGIAV EHWRRSAAML SIDW