Gene Cagg_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCagg_0860 
Symbol 
ID7268311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChloroflexus aggregans DSM 9485 
KingdomBacteria 
Replicon accessionNC_011831 
Strand
Start bp1070154 
End bp1071017 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content58% 
IMG OID643565706 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002462215 
Protein GI219847782 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.943731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.246629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGATA TGCAAGGCAA AACCGTCATT GTGACCGGTG CTAATTCAGG GATCGGCTAC 
GTCACGGCAC GCGAGCTGGC GAAGATGGGG GCGCGCGTGA TGATGGTCTG CCGTTCGCAA
AGCAAGGGTG AAGCGGCGCG CCAGCGGATC ATGCAAGAAG CGCCCAACGC ACCGCAACCC
GAACTGGTAT TAGCCGATTT CGCCTCGCTG GCTTCAGTAC GACGCGCCGC TACCGAACTA
CTCGAACGCT GCCCACGTAT CGATGTGCTG GTCAACAACG CCGGTCTCTT CGTCTCCGAA
CCGTTGGCCA GCGCCGACGG TTACGAACTC ACCTTTGCCG TCAACCATCT TGCTCCATTT
TTACTCACCA ACATGTTGCT AGAGCGGATC ATTGCCAGCG CACCGGCCCG CATTGTCAAC
GTGTCATCGT ATGCGCACGT CACCGGCAAC GTCAAGATTC CGCAGATTGC CTCACCGCAA
CGTGGTAATA TCGCGCAGGC GTATGGTGAC TCAAAGCTGT GCAACATTCT CTTTACCAAC
GAATTAGCCC GGCGTTTGCA AGGCACCGGC GTCACTGCCA ACAGCTTGCA TCCGGGCGCC
GTAGCCACCA ACTTCGCTGC CGATGCCCGT GGGTTGTTTG CGTTCTTCTT CCGGCTCGCC
CGGCCATTGA TGCTCACACC CGAACAAGGC GCAGCTACAT CGATCTACCT TGCTTCGTCG
CCGGAAGTGG AAGGGATGAG TGGGCTGTAC TTTGTGCGAA AAAAGCCGGC CAAAACCTCG
GCGCGCGCCC AAGATGAGGC GCTGGCGCGG CGGTTGTGGG AATTCAGCGA GCAGTTAGTC
CGCGAGAAGG TGACCGTCGC ATAA
 
Protein sequence
MQDMQGKTVI VTGANSGIGY VTARELAKMG ARVMMVCRSQ SKGEAARQRI MQEAPNAPQP 
ELVLADFASL ASVRRAATEL LERCPRIDVL VNNAGLFVSE PLASADGYEL TFAVNHLAPF
LLTNMLLERI IASAPARIVN VSSYAHVTGN VKIPQIASPQ RGNIAQAYGD SKLCNILFTN
ELARRLQGTG VTANSLHPGA VATNFAADAR GLFAFFFRLA RPLMLTPEQG AATSIYLASS
PEVEGMSGLY FVRKKPAKTS ARAQDEALAR RLWEFSEQLV REKVTVA