Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cagg_0860 |
Symbol | |
ID | 7268311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chloroflexus aggregans DSM 9485 |
Kingdom | Bacteria |
Replicon accession | NC_011831 |
Strand | + |
Start bp | 1070154 |
End bp | 1071017 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643565706 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002462215 |
Protein GI | 219847782 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.943731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.246629 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGATA TGCAAGGCAA AACCGTCATT GTGACCGGTG CTAATTCAGG GATCGGCTAC GTCACGGCAC GCGAGCTGGC GAAGATGGGG GCGCGCGTGA TGATGGTCTG CCGTTCGCAA AGCAAGGGTG AAGCGGCGCG CCAGCGGATC ATGCAAGAAG CGCCCAACGC ACCGCAACCC GAACTGGTAT TAGCCGATTT CGCCTCGCTG GCTTCAGTAC GACGCGCCGC TACCGAACTA CTCGAACGCT GCCCACGTAT CGATGTGCTG GTCAACAACG CCGGTCTCTT CGTCTCCGAA CCGTTGGCCA GCGCCGACGG TTACGAACTC ACCTTTGCCG TCAACCATCT TGCTCCATTT TTACTCACCA ACATGTTGCT AGAGCGGATC ATTGCCAGCG CACCGGCCCG CATTGTCAAC GTGTCATCGT ATGCGCACGT CACCGGCAAC GTCAAGATTC CGCAGATTGC CTCACCGCAA CGTGGTAATA TCGCGCAGGC GTATGGTGAC TCAAAGCTGT GCAACATTCT CTTTACCAAC GAATTAGCCC GGCGTTTGCA AGGCACCGGC GTCACTGCCA ACAGCTTGCA TCCGGGCGCC GTAGCCACCA ACTTCGCTGC CGATGCCCGT GGGTTGTTTG CGTTCTTCTT CCGGCTCGCC CGGCCATTGA TGCTCACACC CGAACAAGGC GCAGCTACAT CGATCTACCT TGCTTCGTCG CCGGAAGTGG AAGGGATGAG TGGGCTGTAC TTTGTGCGAA AAAAGCCGGC CAAAACCTCG GCGCGCGCCC AAGATGAGGC GCTGGCGCGG CGGTTGTGGG AATTCAGCGA GCAGTTAGTC CGCGAGAAGG TGACCGTCGC ATAA
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Protein sequence | MQDMQGKTVI VTGANSGIGY VTARELAKMG ARVMMVCRSQ SKGEAARQRI MQEAPNAPQP ELVLADFASL ASVRRAATEL LERCPRIDVL VNNAGLFVSE PLASADGYEL TFAVNHLAPF LLTNMLLERI IASAPARIVN VSSYAHVTGN VKIPQIASPQ RGNIAQAYGD SKLCNILFTN ELARRLQGTG VTANSLHPGA VATNFAADAR GLFAFFFRLA RPLMLTPEQG AATSIYLASS PEVEGMSGLY FVRKKPAKTS ARAQDEALAR RLWEFSEQLV REKVTVA
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