Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TBFG_10068 |
Symbol | |
ID | 5220731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Mycobacterium tuberculosis F11 |
Kingdom | Bacteria |
Replicon accession | NC_009565 |
Strand | + |
Start bp | 75443 |
End bp | 76354 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640604808 |
Product | short chain dehydrogenase |
Protein accession | YP_001286013 |
Protein GI | 148821259 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 421 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 198 |
Fosmid unclonability p-value | 0.362569 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAAAT GGACTGCCGC CGACATTCCT GACCAGACCG GCCGGACCGC CGTCATCACG GGGGCCAACA CCGGACTTGG ATTCGAGACC GCCGCAGCGC TTGCCGCCCA TGGTGCACAC GTGGTGCTGG CTGTGCGCAA CCTCGACAAG GGCAAGCAGG CGGCGGCACG CATCACCGAG GCCACCCCCG GCGCCGAAGT AGAGCTTCAG GAGCTTGACC TGACCTCGCT GGCGTCGGTG CGCGCCGCCG CGGCACAGCT GAAGTCTGAC CACCAGCGCA TCGACCTGCT GATCAACAAC GCCGGGGTGA TGTATACACC CCGACAGACC ACAGCAGACG GCTTCGAGAT GCAGTTCGGC ACCAACCACT TGGGCCATTT CGCGTTGACC GGCCTGTTGA TTGATCGACT GCTGCCCGTC GCCGGTTCAC GAGTGGTCAC CATCAGCAGC GTCGGCCATC GCATCCGTGC CGCAATCCAT TTCGACGACC TCCAGTGGGA ACGCCGGTAC AGGCGGGTCG CCGCCTACGG CCAAGCCAAG CTCGCCAACC TGCTGTTCAC TTATGAACTT CAGCGTCGGT TAGCACCGGG CGGAACCACC ATCGCGGTCG CGTCGCACCC GGGAGTGTCC AACACCGAAC TGGTCCGCAA CATGCCACGG CCGCTCGTCG CGGTGGCGGC CATACTGGCG CCGCTGATGC AAGACGCCGA ACTGGGGGCC CTGCCGACAT TGCGTGCCGC CACCGATCCC GCGGTGCGCG GCGGCCAGTA CTTCGGACCC GATGGCTTCG GTGAAATACG GGGCTACCCG AAGGTGGTGG CCTCCAGCGC CCAGTCTCAC GACGAGCAGC TGCAGCGCCG CCTGTGGGCT GTGTCCGAAG AGCTCACCGG GGTCGTCTAT CCCGTCGGAT GA
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Protein sequence | MTKWTAADIP DQTGRTAVIT GANTGLGFET AAALAAHGAH VVLAVRNLDK GKQAAARITE ATPGAEVELQ ELDLTSLASV RAAAAQLKSD HQRIDLLINN AGVMYTPRQT TADGFEMQFG TNHLGHFALT GLLIDRLLPV AGSRVVTISS VGHRIRAAIH FDDLQWERRY RRVAAYGQAK LANLLFTYEL QRRLAPGGTT IAVASHPGVS NTELVRNMPR PLVAVAAILA PLMQDAELGA LPTLRAATDP AVRGGQYFGP DGFGEIRGYP KVVASSAQSH DEQLQRRLWA VSEELTGVVY PVG
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