| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_3678 |
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| Symbol | |
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| ID | 5541180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 4813196 |
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| End bp | 4814074 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640895798 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001433745 |
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| Protein GI | 156743616 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0772847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.304058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACACA CACCTGTCTC TCTTGTCACC GGCGCAACGT CGGGAATTGG CGAAGTCACC
GCGCGCGAAC TGGCGCGTCG CGGGATGCAC GTCGTGATCG TCGGGCGCAA CCGGGAACGC
ACTGCGGCGA CGGTCGCGCG TATCAAACAG GCGACCGGCG TCGATGTCGA GCCGCTCATT
GCCGATCTTT CGTCGCAGGC CGGCGTTCGC TCGGTTGCCG AAGCGTTCGC GCAGCGCCAT
ACGCGGCTCG ATGTGCTGGT CAATAACGCC GGCGGCTTTT TCGCTTCGCG CCAGGTCAGC
GCTGACGGCA TCGAGATGAC CTGGGCGCTG AACCATATGA GTTACTTTTT GCTGACCAAT
CTGCTGCTCG ATACGTTGCG CGCCAGCGCG CCGGCGCGGG TCGTCAATGT GTCTTCGGAT
GCGCACCGCA ACGGGCGGAT GCGCTGGGAC GATCTCCAAT TCAGCCGTGG CTACAACGGT
TGGGCTGCGT ATGCGCAATC GAAACTGGCG AATATTCTGT TCTCGAACGA ACTGGCGCGC
CGACTGGAAG GTTCAGGCGT CACGTCGAAC GCGCTGCATC CGGGGTTTGT TGCAACGCGG
TTTGCGCACA ACAATGGCGC GCTCTGGGGC GGGCTGATGG CGCTCATGCA GCGTCTGTGG
GCAATCAGTC CAGAAGAAGG CGCGCAGACA TCGATCTATC TGGCGACGGC GCCTGAAGTG
GCAACCGTCA GCGGCAGGTA TTTCGTCAAG TCGCGCGCAA CGTCGCCCGC GCCGCAGGCG
CAGGATATGG ACGCAGCCGC GCGCCTGTGG GAGATCAGCG AACGGATGCT GGTCAACTCT
GCGCCAGTTC CTCAAGGCGG CGCACATTCA CCAGCGTAA
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| Protein sequence | MAHTPVSLVT GATSGIGEVT ARELARRGMH VVIVGRNRER TAATVARIKQ ATGVDVEPLI
ADLSSQAGVR SVAEAFAQRH TRLDVLVNNA GGFFASRQVS ADGIEMTWAL NHMSYFLLTN
LLLDTLRASA PARVVNVSSD AHRNGRMRWD DLQFSRGYNG WAAYAQSKLA NILFSNELAR
RLEGSGVTSN ALHPGFVATR FAHNNGALWG GLMALMQRLW AISPEEGAQT SIYLATAPEV
ATVSGRYFVK SRATSPAPQA QDMDAAARLW EISERMLVNS APVPQGGAHS PA
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