Gene Mmcs_5172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmcs_5172 
Symbol 
ID4114001 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium sp. MCS 
KingdomBacteria 
Replicon accessionNC_008146 
Strand
Start bp5459187 
End bp5460023 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID638034330 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_642332 
Protein GI108802135 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGAA GAACGATCGT CATCACCGGT GCCAGCGACG GTGTGGGTGC CGCCGCGGCC 
AAGCGGCTGA GCCGCAGCGG CGAGAACGTC GTGGTGGTCG GGCGCTCGCC GCAGAAGACC
GCGGCCGTGG CCGACGCGCT GGAGGCGGAT TCGTTCGTCG CCGACTTTTC CGATCTCGCG
CAGGTGCGCG ACCTCGCGCA ACGGCTGCTC GACGCGTACC CGCGGATTGA CGTGCTGGCC
AACAATGCCG GCGGGATGAT GAACACCCGA GAGACCACCG TCGACGGTTT CGAGAAGACC
TTCCAGGTCA ACCATCTCGC ACCGGTGCTG CTGACCACGC TGCTGCTCGA CCGGCTCGTG
CAGTGCCGTG CGTCGGTGCT CAACACCTCG AGCATGGCCA ACAAGTTCGT CCGTACCGGC
TTCGACGACC TCGACGCGGT ACAGAAGCAG AGCGGATCGG TCGCCTACAG CTCGTCGAAG
CTGGCCAACA TCCTGTTCAC CAAGGAACTG CACCGCCGCT ACCACGGTGC CGGGATCTCC
ACGGCCGCTT TTCATCCCGG GCCGGTGGCG TCGAATTTCA GTGCCGAGGT GGACAATCCG
ATGTTCGGGG TGATCTACCG CAGCCCGCTT CGGCACCTCG CGCTGATCGG GACCGAACAG
GGCAGCGACG AACTGGTGTG GCTGGCCTCG GCGACCCCTG GCGTGGACTG GCGCTCCGGG
GAGTACTACC ACAAGCACAA GGTGGCCAAG GCGAACAAGC TCGCCGACGA CGCGGGAATG
GCCGAACGGC TGTGGGAGAA CAGCCTCGAA CTGCTGGGCG AGAGGGCGGT GTCATGA
 
Protein sequence
MAGRTIVITG ASDGVGAAAA KRLSRSGENV VVVGRSPQKT AAVADALEAD SFVADFSDLA 
QVRDLAQRLL DAYPRIDVLA NNAGGMMNTR ETTVDGFEKT FQVNHLAPVL LTTLLLDRLV
QCRASVLNTS SMANKFVRTG FDDLDAVQKQ SGSVAYSSSK LANILFTKEL HRRYHGAGIS
TAAFHPGPVA SNFSAEVDNP MFGVIYRSPL RHLALIGTEQ GSDELVWLAS ATPGVDWRSG
EYYHKHKVAK ANKLADDAGM AERLWENSLE LLGERAVS