| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RoseRS_0015 |
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| Symbol | |
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| ID | 5206948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus sp. RS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009523 |
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| Strand | - |
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| Start bp | 18072 |
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| End bp | 18938 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640593649 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001274408 |
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| Protein GI | 148654203 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.725179 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGATA TGACCGGTCG TGTCTGCGTT GTCACCGGCG CAAACACGGG TATTGGCAAA
GCCACGGCGC TTGGTCTGGC GCGGATGGGC GCCACCGTCG TCATGATCTG TCGCAACCGC
GCACGTGGCG AGGCGGCACA GACAGAGGTG CAGCGCGTCG CCTCTGCACC GGTTGACCTC
TTTCGCGCCG ATCTGTCGTC GCAGGCCGAG GTGCGTCAGG TAGCCGACGA TATTCGTGCC
CGCTATGCCC ACATTCACGT TCTTATCCAC AACGCCGGAC TGCAACTGCC GCAACGCACC
CTCAGCGTCG ATGGCATCGA AATGACGCTC GCCGTCAACC ATGGAGCGCC ATTTCTTTTG
ACCCACTGTT TGCTGGATGC ACTGAAGGCT GGTGCGCCAT CACGTATTGT CGTCGTATCG
TCGCTGGTGC ATCGGTGGGG GAGCATCGAT TTTGATGATC TCCATCTCGA ACGCGGCTAT
ACTATGGATC GGGCGTATTT CCGGTCGAAA TTGTGCAATG TGCTGTTCAC ACGCGAACTG
GCGCGGCGAC TATCCGGTTC TGGCGTGACT GCCAACAGCC TGGAGCCGGG TCTGGTGAAA
ACTGACTTTG CGCGCGTCTA CACTGGCGTG CAGGGATGGT TCGTCCATAA TGTGTGGATG
CGTCTGTTTG CTCAAACGCC TGAGCAGGGC GCGCAGACGT CGGTGTATCT TGCGACCTCG
CCTGAGGTTG CCGGGGTCAC AGGCGCACAC TTCGCAAAAT GTCGTCCCAT CGAGCCGTCG
ACGCTTGCGC GTGATGATGC CCTGGCGCGG CGTCTGTGGG ATGTCAGTGT GCATTTGTGC
AATTATAGCA GTTCTCAGAT ACGTTGA
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| Protein sequence | MNDMTGRVCV VTGANTGIGK ATALGLARMG ATVVMICRNR ARGEAAQTEV QRVASAPVDL
FRADLSSQAE VRQVADDIRA RYAHIHVLIH NAGLQLPQRT LSVDGIEMTL AVNHGAPFLL
THCLLDALKA GAPSRIVVVS SLVHRWGSID FDDLHLERGY TMDRAYFRSK LCNVLFTREL
ARRLSGSGVT ANSLEPGLVK TDFARVYTGV QGWFVHNVWM RLFAQTPEQG AQTSVYLATS
PEVAGVTGAH FAKCRPIEPS TLARDDALAR RLWDVSVHLC NYSSSQIR
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