Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RoseRS_0015 |
Symbol | |
ID | 5206948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus sp. RS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009523 |
Strand | - |
Start bp | 18072 |
End bp | 18938 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640593649 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001274408 |
Protein GI | 148654203 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.725179 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATA TGACCGGTCG TGTCTGCGTT GTCACCGGCG CAAACACGGG TATTGGCAAA GCCACGGCGC TTGGTCTGGC GCGGATGGGC GCCACCGTCG TCATGATCTG TCGCAACCGC GCACGTGGCG AGGCGGCACA GACAGAGGTG CAGCGCGTCG CCTCTGCACC GGTTGACCTC TTTCGCGCCG ATCTGTCGTC GCAGGCCGAG GTGCGTCAGG TAGCCGACGA TATTCGTGCC CGCTATGCCC ACATTCACGT TCTTATCCAC AACGCCGGAC TGCAACTGCC GCAACGCACC CTCAGCGTCG ATGGCATCGA AATGACGCTC GCCGTCAACC ATGGAGCGCC ATTTCTTTTG ACCCACTGTT TGCTGGATGC ACTGAAGGCT GGTGCGCCAT CACGTATTGT CGTCGTATCG TCGCTGGTGC ATCGGTGGGG GAGCATCGAT TTTGATGATC TCCATCTCGA ACGCGGCTAT ACTATGGATC GGGCGTATTT CCGGTCGAAA TTGTGCAATG TGCTGTTCAC ACGCGAACTG GCGCGGCGAC TATCCGGTTC TGGCGTGACT GCCAACAGCC TGGAGCCGGG TCTGGTGAAA ACTGACTTTG CGCGCGTCTA CACTGGCGTG CAGGGATGGT TCGTCCATAA TGTGTGGATG CGTCTGTTTG CTCAAACGCC TGAGCAGGGC GCGCAGACGT CGGTGTATCT TGCGACCTCG CCTGAGGTTG CCGGGGTCAC AGGCGCACAC TTCGCAAAAT GTCGTCCCAT CGAGCCGTCG ACGCTTGCGC GTGATGATGC CCTGGCGCGG CGTCTGTGGG ATGTCAGTGT GCATTTGTGC AATTATAGCA GTTCTCAGAT ACGTTGA
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Protein sequence | MNDMTGRVCV VTGANTGIGK ATALGLARMG ATVVMICRNR ARGEAAQTEV QRVASAPVDL FRADLSSQAE VRQVADDIRA RYAHIHVLIH NAGLQLPQRT LSVDGIEMTL AVNHGAPFLL THCLLDALKA GAPSRIVVVS SLVHRWGSID FDDLHLERGY TMDRAYFRSK LCNVLFTREL ARRLSGSGVT ANSLEPGLVK TDFARVYTGV QGWFVHNVWM RLFAQTPEQG AQTSVYLATS PEVAGVTGAH FAKCRPIEPS TLARDDALAR RLWDVSVHLC NYSSSQIR
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