Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_3159 |
Symbol | |
ID | 5832535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 3511207 |
End bp | 3512052 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641368960 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001640618 |
Protein GI | 163852575 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.244285 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCTCG ACGGTCGCAC CGCCCTCGTC ACCGGCGCCT CCTCCGGGAT CGGCGCCGAG ACGGCCCTCG GGCTCGCCCG CCTCGGGGCG CGGGTCGGCC TCGTCGGGCG CGATCGCGAG CGCACGGAAC GCGCCGCCGC GCATCTGCGC CGGGTGACCG GCGGCGCGGC GGACGTCTTT CTCGCCGACC TGTCGAGCCA AGCCGAGATC CGCCGGCTCG CGGGCGAGGT GCGAGCGCGC TACCCCGCCC TCGACCTCCT CGTGAACAAT GCCGGCGCGA TCTTCTCGGA GCGCCACGTC ACGGCCGACG GAATCGAGCG GACCTGGGCC CTCGACCATC TCACCTACGT GCTGCTGACG CACGAGTTGC GTCGCCCGCT CGAAGCCGCG CCCCGCGCCC GCATCGTCAA CCTCGCCTCC GCCGCCCATA CCCGCGGGCG CATCGACTTC GACGATCTCG GCGGCGAGCG CCGCTACACG GCGATGAAGG CCTATGCCCA GGCCAAGCTC GGCAACGTGC TGTTCACCTA TGCGCTCGCC CGGCGGCTGG CCGGAAGCGG CATCACCGTC AACGCGGTGC ATCCCGGCGT CGTGGCGAGC GACTTCGCCA AGAACACGAG GGGTGGGCTC GGCTTCGCCT GGAGCCTGAT CCGCCCGTTC CTGATCTCGA CCGAGGCCGG CGCCAGGACC TCGCTCCACG TCGCCGCCGC GCCCGAACTC GACGGCGTGA GCGGACGCTA CTTCGCCAAG AGCCGCGAGA CCGCCTCGTC CACCCGCAGC CGGGACGAGG CATTGCAGGA GCGGGTCTGG ACCCTGAGCC GGCGCCAGAC CGGAATCGAG GCCTGA
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Protein sequence | MRLDGRTALV TGASSGIGAE TALGLARLGA RVGLVGRDRE RTERAAAHLR RVTGGAADVF LADLSSQAEI RRLAGEVRAR YPALDLLVNN AGAIFSERHV TADGIERTWA LDHLTYVLLT HELRRPLEAA PRARIVNLAS AAHTRGRIDF DDLGGERRYT AMKAYAQAKL GNVLFTYALA RRLAGSGITV NAVHPGVVAS DFAKNTRGGL GFAWSLIRPF LISTEAGART SLHVAAAPEL DGVSGRYFAK SRETASSTRS RDEALQERVW TLSRRQTGIE A
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